EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000005642 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 8888 bases
Position: chrgroupXII:6730343-6739230
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000007457	ResIII	PF04851.15	3.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000007476	-	3783	-	ENSGACP00000007457	1261 (aa)	-	G3NQ41

Gene Model

Click here to download ENSGACG00000005642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000005642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000005642	-	95	63.925	ENSGACG00000001558	rad54l2	89	63.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000005642	-	98	62.931	ENSG00000164080	RAD54L2	89	62.469	Homo_sapiens
ENSGACG00000005642	-	100	80.341	ENSAPOG00000024141	-	87	79.876	Acanthochromis_polyacanthus
ENSGACG00000005642	-	98	62.677	ENSAMEG00000009326	RAD54L2	84	63.570	Ailuropoda_melanoleuca
ENSGACG00000005642	-	94	80.218	ENSACIG00000015932	-	86	79.883	Amphilophus_citrinellus
ENSGACG00000005642	-	98	63.072	ENSACIG00000018079	rad54l2	85	64.706	Amphilophus_citrinellus
ENSGACG00000005642	-	100	81.115	ENSAOCG00000022380	-	89	80.110	Amphiprion_ocellaris
ENSGACG00000005642	-	100	81.187	ENSATEG00000006641	-	87	81.110	Anabas_testudineus
ENSGACG00000005642	-	98	64.049	ENSATEG00000009346	rad54l2	89	64.320	Anabas_testudineus
ENSGACG00000005642	-	95	65.806	ENSAPLG00000002121	RAD54L2	86	66.210	Anas_platyrhynchos
ENSGACG00000005642	-	85	70.738	ENSACAG00000015883	RAD54L2	89	67.030	Anolis_carolinensis
ENSGACG00000005642	-	98	62.696	ENSANAG00000025396	RAD54L2	84	63.651	Aotus_nancymaae
ENSGACG00000005642	-	98	62.405	ENSACLG00000019111	rad54l2	88	64.490	Astatotilapia_calliptera
ENSGACG00000005642	-	100	79.783	ENSACLG00000018296	-	87	80.403	Astatotilapia_calliptera
ENSGACG00000005642	-	95	65.341	ENSAMXG00000013807	rad54l2	82	65.270	Astyanax_mexicanus
ENSGACG00000005642	-	98	62.598	ENSBTAG00000032253	RAD54L2	85	63.548	Bos_taurus
ENSGACG00000005642	-	55	47.619	WBGene00007761	rad-26	57	47.619	Caenorhabditis_elegans
ENSGACG00000005642	-	98	63.091	ENSCJAG00000005575	RAD54L2	88	64.146	Callithrix_jacchus
ENSGACG00000005642	-	98	62.598	ENSCAFG00000010120	RAD54L2	84	63.489	Canis_familiaris
ENSGACG00000005642	-	98	62.598	ENSCAFG00020022320	RAD54L2	84	63.489	Canis_lupus_dingo
ENSGACG00000005642	-	98	62.461	ENSCHIG00000008830	RAD54L2	84	63.600	Capra_hircus
ENSGACG00000005642	-	98	62.431	ENSTSYG00000013200	RAD54L2	84	63.460	Carlito_syrichta
ENSGACG00000005642	-	88	60.922	ENSCAPG00000016465	RAD54L2	82	60.801	Cavia_aperea
ENSGACG00000005642	-	98	62.774	ENSCPOG00000005941	RAD54L2	84	63.732	Cavia_porcellus
ENSGACG00000005642	-	83	62.977	ENSCCAG00000024465	RAD54L2	81	62.977	Cebus_capucinus
ENSGACG00000005642	-	98	62.725	ENSCATG00000039891	RAD54L2	85	63.761	Cercocebus_atys
ENSGACG00000005642	-	98	62.833	ENSCLAG00000008059	RAD54L2	84	63.790	Chinchilla_lanigera
ENSGACG00000005642	-	98	62.774	ENSCSAG00000014027	RAD54L2	84	63.813	Chlorocebus_sabaeus
ENSGACG00000005642	-	95	66.640	ENSCPBG00000016624	RAD54L2	86	66.640	Chrysemys_picta_bellii
ENSGACG00000005642	-	79	50.483	ENSCING00000009208	-	95	50.429	Ciona_intestinalis
ENSGACG00000005642	-	98	62.696	ENSCANG00000036093	RAD54L2	85	63.651	Colobus_angolensis_palliatus
ENSGACG00000005642	-	98	62.451	ENSCGRG00000007921	Rad54l2	84	63.511	Cricetulus_griseus_crigri
ENSGACG00000005642	-	90	64.377	ENSCSEG00000001740	rad54l2	80	62.927	Cynoglossus_semilaevis
ENSGACG00000005642	-	98	76.535	ENSCSEG00000006115	-	96	76.535	Cynoglossus_semilaevis
ENSGACG00000005642	-	99	77.812	ENSCVAG00000005376	-	88	77.812	Cyprinodon_variegatus
ENSGACG00000005642	-	96	64.464	ENSCVAG00000017887	rad54l2	82	64.384	Cyprinodon_variegatus
ENSGACG00000005642	-	94	67.304	ENSDARG00000063031	rad54l2	88	64.903	Danio_rerio
ENSGACG00000005642	-	98	62.088	ENSDNOG00000017359	RAD54L2	86	63.124	Dasypus_novemcinctus
ENSGACG00000005642	-	89	69.259	ENSDORG00000000651	Rad54l2	81	70.796	Dipodomys_ordii
ENSGACG00000005642	-	74	59.479	FBgn0034976	CG4049	62	52.703	Drosophila_melanogaster
ENSGACG00000005642	-	95	62.662	ENSETEG00000013290	RAD54L2	90	62.723	Echinops_telfairi
ENSGACG00000005642	-	80	58.209	ENSEBUG00000001591	rad54l2	74	61.554	Eptatretus_burgeri
ENSGACG00000005642	-	98	62.980	ENSEASG00005012868	RAD54L2	84	63.974	Equus_asinus_asinus
ENSGACG00000005642	-	98	62.745	ENSECAG00000014759	RAD54L2	84	63.974	Equus_caballus
ENSGACG00000005642	-	81	69.515	ENSEEUG00000001759	RAD54L2	76	69.515	Erinaceus_europaeus
ENSGACG00000005642	-	100	70.542	ENSELUG00000011246	RAD54L2	89	70.542	Esox_lucius
ENSGACG00000005642	-	98	62.431	ENSFCAG00000018563	RAD54L2	84	63.489	Felis_catus
ENSGACG00000005642	-	93	67.052	ENSFALG00000008938	RAD54L2	91	67.244	Ficedula_albicollis
ENSGACG00000005642	-	98	62.696	ENSFDAG00000017084	RAD54L2	84	63.651	Fukomys_damarensis
ENSGACG00000005642	-	100	77.537	ENSFHEG00000017845	-	87	77.537	Fundulus_heteroclitus
ENSGACG00000005642	-	95	64.943	ENSFHEG00000023241	rad54l2	83	64.580	Fundulus_heteroclitus
ENSGACG00000005642	-	94	65.267	ENSGMOG00000010674	rad54l2	91	65.444	Gadus_morhua
ENSGACG00000005642	-	95	66.051	ENSGALG00000003243	RAD54L2	84	66.372	Gallus_gallus
ENSGACG00000005642	-	95	64.821	ENSGAFG00000021535	rad54l2	77	70.398	Gambusia_affinis
ENSGACG00000005642	-	100	75.464	ENSGAFG00000002396	-	88	75.851	Gambusia_affinis
ENSGACG00000005642	-	95	66.161	ENSGAGG00000020971	RAD54L2	88	65.806	Gopherus_agassizii
ENSGACG00000005642	-	98	62.853	ENSGGOG00000010032	RAD54L2	85	63.813	Gorilla_gorilla
ENSGACG00000005642	-	100	79.938	ENSHBUG00000018930	-	87	80.558	Haplochromis_burtoni
ENSGACG00000005642	-	98	63.025	ENSHBUG00000012480	rad54l2	87	64.696	Haplochromis_burtoni
ENSGACG00000005642	-	98	62.774	ENSHGLG00000012116	RAD54L2	84	63.732	Heterocephalus_glaber_female
ENSGACG00000005642	-	98	62.774	ENSHGLG00100007205	RAD54L2	84	63.732	Heterocephalus_glaber_male
ENSGACG00000005642	-	96	63.070	ENSHCOG00000007601	rad54l2	80	62.830	Hippocampus_comes
ENSGACG00000005642	-	100	72.531	ENSHCOG00000006741	-	88	72.531	Hippocampus_comes
ENSGACG00000005642	-	95	63.689	ENSIPUG00000019664	rad54l2	82	62.853	Ictalurus_punctatus
ENSGACG00000005642	-	96	62.763	ENSIPUG00000024973	-	88	62.682	Ictalurus_punctatus
ENSGACG00000005642	-	98	62.461	ENSSTOG00000010014	RAD54L2	84	63.629	Ictidomys_tridecemlineatus
ENSGACG00000005642	-	98	62.707	ENSJJAG00000014332	Rad54l2	84	63.680	Jaculus_jaculus
ENSGACG00000005642	-	100	61.082	ENSKMAG00000001976	rad54l2	87	63.659	Kryptolebias_marmoratus
ENSGACG00000005642	-	100	77.494	ENSKMAG00000002931	-	87	77.417	Kryptolebias_marmoratus
ENSGACG00000005642	-	87	81.458	ENSLBEG00000008534	-	86	81.098	Labrus_bergylta
ENSGACG00000005642	-	95	63.954	ENSLBEG00000018779	rad54l2	86	63.149	Labrus_bergylta
ENSGACG00000005642	-	96	61.436	ENSLACG00000016004	RAD54L2	89	60.045	Latimeria_chalumnae
ENSGACG00000005642	-	81	72.970	ENSLOCG00000014222	rad54l2	98	72.443	Lepisosteus_oculatus
ENSGACG00000005642	-	98	62.363	ENSLAFG00000005966	RAD54L2	84	63.387	Loxodonta_africana
ENSGACG00000005642	-	98	62.774	ENSMFAG00000041836	RAD54L2	85	63.813	Macaca_fascicularis
ENSGACG00000005642	-	98	62.696	ENSMMUG00000012002	RAD54L2	84	63.732	Macaca_mulatta
ENSGACG00000005642	-	98	62.774	ENSMNEG00000035063	RAD54L2	86	63.813	Macaca_nemestrina
ENSGACG00000005642	-	98	62.774	ENSMLEG00000034668	RAD54L2	85	63.813	Mandrillus_leucophaeus
ENSGACG00000005642	-	98	62.300	ENSMAMG00000023761	rad54l2	81	67.761	Mastacembelus_armatus
ENSGACG00000005642	-	100	79.969	ENSMAMG00000015321	-	90	81.364	Mastacembelus_armatus
ENSGACG00000005642	-	100	79.706	ENSMZEG00005021308	-	87	80.325	Maylandia_zebra
ENSGACG00000005642	-	98	62.920	ENSMZEG00005012584	rad54l2	85	64.767	Maylandia_zebra
ENSGACG00000005642	-	95	66.026	ENSMGAG00000002911	RAD54L2	84	66.026	Meleagris_gallopavo
ENSGACG00000005642	-	81	68.798	ENSMAUG00000011651	Rad54l2	91	70.227	Mesocricetus_auratus
ENSGACG00000005642	-	98	62.667	ENSMICG00000002777	RAD54L2	86	63.622	Microcebus_murinus
ENSGACG00000005642	-	99	61.945	ENSMOCG00000022448	Rad54l2	85	63.813	Microtus_ochrogaster
ENSGACG00000005642	-	94	65.463	ENSMMOG00000021709	rad54l2	85	65.381	Mola_mola
ENSGACG00000005642	-	94	81.411	ENSMMOG00000016901	-	87	81.328	Mola_mola
ENSGACG00000005642	-	95	66.317	ENSMODG00000011850	RAD54L2	88	66.181	Monodelphis_domestica
ENSGACG00000005642	-	88	80.536	ENSMALG00000015084	-	95	82.648	Monopterus_albus
ENSGACG00000005642	-	98	62.431	MGP_CAROLIEiJ_G0032634	Rad54l2	84	63.409	Mus_caroli
ENSGACG00000005642	-	98	62.510	ENSMUSG00000040661	Rad54l2	84	63.489	Mus_musculus
ENSGACG00000005642	-	98	62.109	MGP_PahariEiJ_G0015502	Rad54l2	84	63.073	Mus_pahari
ENSGACG00000005642	-	98	62.402	MGP_SPRETEiJ_G0033779	Rad54l2	84	63.379	Mus_spretus
ENSGACG00000005642	-	98	62.588	ENSMPUG00000011865	RAD54L2	84	63.570	Mustela_putorius_furo
ENSGACG00000005642	-	98	62.931	ENSMLUG00000004605	RAD54L2	84	63.893	Myotis_lucifugus
ENSGACG00000005642	-	98	62.774	ENSNGAG00000015629	Rad54l2	84	63.761	Nannospalax_galili
ENSGACG00000005642	-	100	79.876	ENSNBRG00000022847	-	87	80.853	Neolamprologus_brichardi
ENSGACG00000005642	-	88	67.622	ENSNBRG00000001937	rad54l2	86	64.407	Neolamprologus_brichardi
ENSGACG00000005642	-	98	62.853	ENSNLEG00000007038	RAD54L2	85	63.813	Nomascus_leucogenys
ENSGACG00000005642	-	90	74.296	ENSMEUG00000009835	RAD54L2	84	74.296	Notamacropus_eugenii
ENSGACG00000005642	-	98	62.853	ENSODEG00000018266	RAD54L2	84	63.893	Octodon_degus
ENSGACG00000005642	-	100	80.640	ENSONIG00000001663	-	89	81.265	Oreochromis_niloticus
ENSGACG00000005642	-	98	64.453	ENSONIG00000014468	rad54l2	86	63.729	Oreochromis_niloticus
ENSGACG00000005642	-	95	66.345	ENSOANG00000012793	RAD54L2	86	66.345	Ornithorhynchus_anatinus
ENSGACG00000005642	-	98	62.637	ENSOCUG00000017577	RAD54L2	84	63.813	Oryctolagus_cuniculus
ENSGACG00000005642	-	99	74.534	ENSORLG00000002714	-	87	74.845	Oryzias_latipes
ENSGACG00000005642	-	98	63.336	ENSORLG00000002276	rad54l2	82	64.863	Oryzias_latipes
ENSGACG00000005642	-	99	64.003	ENSORLG00020003470	rad54l2	82	65.137	Oryzias_latipes_hni
ENSGACG00000005642	-	99	74.457	ENSORLG00020019256	-	87	74.768	Oryzias_latipes_hni
ENSGACG00000005642	-	99	74.379	ENSORLG00015013408	-	87	74.690	Oryzias_latipes_hsok
ENSGACG00000005642	-	99	63.820	ENSORLG00015021530	rad54l2	84	65.041	Oryzias_latipes_hsok
ENSGACG00000005642	-	98	62.793	ENSOMEG00000005597	rad54l2	80	64.113	Oryzias_melastigma
ENSGACG00000005642	-	99	74.826	ENSOMEG00000008216	-	89	74.981	Oryzias_melastigma
ENSGACG00000005642	-	80	64.425	ENSOGAG00000012442	RAD54L2	88	64.425	Otolemur_garnettii
ENSGACG00000005642	-	98	62.285	ENSOARG00000007264	RAD54L2	84	63.417	Ovis_aries
ENSGACG00000005642	-	98	62.853	ENSPPAG00000038472	RAD54L2	85	63.813	Pan_paniscus
ENSGACG00000005642	-	98	62.598	ENSPPRG00000010212	RAD54L2	84	63.489	Panthera_pardus
ENSGACG00000005642	-	98	62.667	ENSPTIG00000002240	RAD54L2	84	63.651	Panthera_tigris_altaica
ENSGACG00000005642	-	98	62.853	ENSPTRG00000014974	RAD54L2	85	63.813	Pan_troglodytes
ENSGACG00000005642	-	98	62.774	ENSPANG00000000857	RAD54L2	85	63.813	Papio_anubis
ENSGACG00000005642	-	100	68.360	ENSPKIG00000001065	rad54l2	88	68.203	Paramormyrops_kingsleyae
ENSGACG00000005642	-	78	71.019	ENSPSIG00000014346	RAD54L2	91	71.217	Pelodiscus_sinensis
ENSGACG00000005642	-	86	66.304	ENSPMGG00000002208	rad54l2	86	66.033	Periophthalmus_magnuspinnatus
ENSGACG00000005642	-	96	72.186	ENSPMGG00000000641	-	90	71.111	Periophthalmus_magnuspinnatus
ENSGACG00000005642	-	98	62.588	ENSPEMG00000012051	Rad54l2	84	63.570	Peromyscus_maniculatus_bairdii
ENSGACG00000005642	-	90	66.553	ENSPCIG00000018143	RAD54L2	88	66.411	Phascolarctos_cinereus
ENSGACG00000005642	-	100	77.108	ENSPFOG00000000197	-	87	77.108	Poecilia_formosa
ENSGACG00000005642	-	95	64.309	ENSPFOG00000018644	rad54l2	80	64.344	Poecilia_formosa
ENSGACG00000005642	-	95	64.356	ENSPLAG00000006015	rad54l2	81	64.513	Poecilia_latipinna
ENSGACG00000005642	-	100	76.584	ENSPLAG00000013908	-	88	76.584	Poecilia_latipinna
ENSGACG00000005642	-	95	64.845	ENSPMEG00000021535	rad54l2	85	64.959	Poecilia_mexicana
ENSGACG00000005642	-	100	76.875	ENSPMEG00000009878	-	88	76.875	Poecilia_mexicana
ENSGACG00000005642	-	84	68.721	ENSPREG00000008628	rad54l2	88	64.023	Poecilia_reticulata
ENSGACG00000005642	-	100	76.780	ENSPREG00000013377	RAD54L2	87	76.780	Poecilia_reticulata
ENSGACG00000005642	-	98	62.853	ENSPPYG00000013831	RAD54L2	87	63.813	Pongo_abelii
ENSGACG00000005642	-	84	61.868	ENSPCAG00000011952	RAD54L2	79	61.868	Procavia_capensis
ENSGACG00000005642	-	98	62.588	ENSPCOG00000015983	RAD54L2	84	63.651	Propithecus_coquereli
ENSGACG00000005642	-	100	80.015	ENSPNYG00000011435	-	87	80.635	Pundamilia_nyererei
ENSGACG00000005642	-	87	67.397	ENSPNYG00000020693	rad54l2	87	64.421	Pundamilia_nyererei
ENSGACG00000005642	-	95	66.367	ENSPNAG00000006451	rad54l2	85	66.308	Pygocentrus_nattereri
ENSGACG00000005642	-	99	66.904	ENSPNAG00000011583	-	88	66.588	Pygocentrus_nattereri
ENSGACG00000005642	-	79	67.383	ENSRNOG00000049489	LOC102552166	91	68.794	Rattus_norvegicus
ENSGACG00000005642	-	98	59.404	ENSRNOG00000013570	Rad54l2	84	60.291	Rattus_norvegicus
ENSGACG00000005642	-	98	62.696	ENSRBIG00000032434	RAD54L2	89	65.034	Rhinopithecus_bieti
ENSGACG00000005642	-	98	62.696	ENSRROG00000042309	RAD54L2	85	63.651	Rhinopithecus_roxellana
ENSGACG00000005642	-	98	62.853	ENSSBOG00000002139	RAD54L2	84	63.813	Saimiri_boliviensis_boliviensis
ENSGACG00000005642	-	95	65.920	ENSSHAG00000008604	RAD54L2	86	65.705	Sarcophilus_harrisii
ENSGACG00000005642	-	100	70.078	ENSSFOG00015019014	rad54l2	88	69.922	Scleropages_formosus
ENSGACG00000005642	-	95	63.614	ENSSMAG00000020933	rad54l2	86	61.004	Scophthalmus_maximus
ENSGACG00000005642	-	100	78.254	ENSSMAG00000009978	-	87	78.790	Scophthalmus_maximus
ENSGACG00000005642	-	100	80.915	ENSSDUG00000016711	-	87	81.614	Seriola_dumerili
ENSGACG00000005642	-	99	62.576	ENSSDUG00000014268	rad54l2	85	65.820	Seriola_dumerili
ENSGACG00000005642	-	95	65.313	ENSSLDG00000023959	rad54l2	88	64.939	Seriola_lalandi_dorsalis
ENSGACG00000005642	-	97	81.184	ENSSLDG00000023388	-	86	81.863	Seriola_lalandi_dorsalis
ENSGACG00000005642	-	95	80.669	ENSSPAG00000006371	-	87	81.485	Stegastes_partitus
ENSGACG00000005642	-	98	62.290	ENSSPAG00000016532	rad54l2	89	62.271	Stegastes_partitus
ENSGACG00000005642	-	98	62.618	ENSSSCG00000011425	RAD54L2	84	63.570	Sus_scrofa
ENSGACG00000005642	-	95	66.320	ENSTGUG00000004888	RAD54L2	84	66.667	Taeniopygia_guttata
ENSGACG00000005642	-	100	77.252	ENSTRUG00000011066	-	88	77.252	Takifugu_rubripes
ENSGACG00000005642	-	95	64.182	ENSTRUG00000013962	rad54l2	86	60.989	Takifugu_rubripes
ENSGACG00000005642	-	86	79.053	ENSTNIG00000006049	-	98	79.852	Tetraodon_nigroviridis
ENSGACG00000005642	-	84	69.196	ENSTNIG00000014694	rad54l2	97	67.363	Tetraodon_nigroviridis
ENSGACG00000005642	-	89	62.391	ENSTBEG00000003377	RAD54L2	77	70.777	Tupaia_belangeri
ENSGACG00000005642	-	98	62.609	ENSUAMG00000020891	RAD54L2	87	63.260	Ursus_americanus
ENSGACG00000005642	-	98	62.500	ENSUMAG00000021678	RAD54L2	79	70.069	Ursus_maritimus
ENSGACG00000005642	-	98	62.598	ENSVVUG00000026874	RAD54L2	87	63.489	Vulpes_vulpes
ENSGACG00000005642	-	95	63.835	ENSXETG00000000070	rad54l2	86	63.629	Xenopus_tropicalis
ENSGACG00000005642	-	97	74.697	ENSXCOG00000002848	-	88	75.204	Xiphophorus_couchianus
ENSGACG00000005642	-	95	61.959	ENSXCOG00000004961	rad54l2	84	62.002	Xiphophorus_couchianus
ENSGACG00000005642	-	95	64.163	ENSXMAG00000017182	rad54l2	88	64.163	Xiphophorus_maculatus
ENSGACG00000005642	-	99	75.715	ENSXMAG00000019370	-	87	76.762	Xiphophorus_maculatus