EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGACG00000005671 (Gene tree)
Gene ID
-
Gene Symbol
RBMS1 (1 of many)
Alias
C2orf12|DKFZp564H0764|HCC-4|MSSP-1|MSSP-2|MSSP-3|SCR2|YC1
Full Name
RNA binding motif single stranded interacting protein 1
Gene Type
protein_coding
Species
Gasterosteus_aculeatus
Status
putative
Strand
Plus strand
Length
13263 bases
Position
chrgroupXVI:10934378-10947640
Accession
9907
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGACP00000007551RRM_1PF00076.222.3e-3212
ENSGACP00000007551RRM_1PF00076.222.3e-3222
ENSGACP00000007541RRM_1PF00076.223.2e-3212
ENSGACP00000007541RRM_1PF00076.223.2e-3222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGACT00000007560RBMS1 (1 of many)-2011418-ENSGACP00000007541391 (aa)-G3NQC5
ENSGACT00000007570RBMS1 (1 of many)-2021044-ENSGACP00000007551348 (aa)-G3NQD5
Gene Model
Click here to download ENSGACG00000005671's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000005671's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGACG00000005671RBMS19063.131ENSGACG00000003155-9863.592
ENSGACG00000005671RBMS18863.969ENSGACG00000006377RBMS39163.969
ENSGACG00000005671RBMS15935.096ENSGACG00000019484elavl25035.196
ENSGACG00000005671RBMS19862.408ENSGACG00000009332rbms2b9961.425
ENSGACG00000005671RBMS15135.616ENSGACG00000008752celf45739.216
ENSGACG00000005671RBMS15430.818ENSGACG00000003771pabpc1b6430.818
ENSGACG00000005671RBMS15535.052ENSGACG00000013329-5135.052
ENSGACG00000005671RBMS15535.079ENSGACG00000013839elavl36341.818
ENSGACG00000005671RBMS19163.881ENSGACG00000015174rbms1a9168.421
ENSGACG00000005671RBMS18874.000ENSGACG00000000617rbms2a8873.654
ENSGACG00000005671RBMS15434.783ENSGACG00000010657elavl1a5533.505
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGACG00000005671RBMS18977.273ENSG00000153250RBMS18489.720Homo_sapiens
ENSGACG00000005671RBMS19966.150ENSAPOG00000013761rbms1a9966.237Acanthochromis_polyacanthus
ENSGACG00000005671RBMS110088.636ENSAPOG00000024437-10088.636Acanthochromis_polyacanthus
ENSGACG00000005671RBMS18975.281ENSAMEG00000012661RBMS19275.070Ailuropoda_melanoleuca
ENSGACG00000005671RBMS18988.825ENSACIG00000021498RBMS19785.117Amphilophus_citrinellus
ENSGACG00000005671RBMS19960.207ENSACIG00000000113rbms1a9959.794Amphilophus_citrinellus
ENSGACG00000005671RBMS19966.150ENSAOCG00000010066rbms1a9966.237Amphiprion_ocellaris
ENSGACG00000005671RBMS110088.354ENSAOCG00000014482-10088.101Amphiprion_ocellaris
ENSGACG00000005671RBMS19966.408ENSAPEG00000023563rbms1a9966.925Amphiprion_percula
ENSGACG00000005671RBMS110088.354ENSAPEG00000018371-10088.101Amphiprion_percula
ENSGACG00000005671RBMS110089.286ENSATEG00000018573RBMS110089.286Anabas_testudineus
ENSGACG00000005671RBMS19964.858ENSATEG00000015450rbms1a9964.948Anabas_testudineus
ENSGACG00000005671RBMS18976.989ENSAPLG00000007282RBMS18976.771Anas_platyrhynchos
ENSGACG00000005671RBMS19776.410ENSACAG00000011984RBMS18274.811Anolis_carolinensis
ENSGACG00000005671RBMS18176.087ENSANAG00000024424RBMS110076.087Aotus_nancymaae
ENSGACG00000005671RBMS110083.038ENSACLG00000013048RBMS110082.785Astatotilapia_calliptera
ENSGACG00000005671RBMS19965.891ENSACLG00000021512rbms1a9965.464Astatotilapia_calliptera
ENSGACG00000005671RBMS110080.808ENSAMXG00000009969RBMS110080.051Astyanax_mexicanus
ENSGACG00000005671RBMS110071.717ENSAMXG00000002146rbms1a9971.465Astyanax_mexicanus
ENSGACG00000005671RBMS19774.293ENSBTAG00000005180RBMS110073.580Bos_taurus
ENSGACG00000005671RBMS19772.423ENSCJAG00000012871-9872.680Callithrix_jacchus
ENSGACG00000005671RBMS19769.330ENSCJAG00000022465-9970.466Callithrix_jacchus
ENSGACG00000005671RBMS18977.273ENSCJAG00000014861-8976.487Callithrix_jacchus
ENSGACG00000005671RBMS19774.293ENSCAFG00000009922RBMS110073.580Canis_familiaris
ENSGACG00000005671RBMS19770.864ENSCAFG00020006120RBMS110070.309Canis_lupus_dingo
ENSGACG00000005671RBMS18976.136ENSCHIG00000023380RBMS18775.921Capra_hircus
ENSGACG00000005671RBMS18977.273ENSTSYG00000005584RBMS19576.487Carlito_syrichta
ENSGACG00000005671RBMS18976.989ENSCPOG00000012310RBMS19372.900Cavia_porcellus
ENSGACG00000005671RBMS18977.273ENSCCAG00000033841RBMS19177.054Cebus_capucinus
ENSGACG00000005671RBMS18977.273ENSCATG00000043032RBMS19576.487Cercocebus_atys
ENSGACG00000005671RBMS18976.705ENSCLAG00000003031RBMS19572.629Chinchilla_lanigera
ENSGACG00000005671RBMS18977.273ENSCSAG00000015687RBMS18777.054Chlorocebus_sabaeus
ENSGACG00000005671RBMS110074.690ENSCPBG00000026455RBMS110075.186Chrysemys_picta_bellii
ENSGACG00000005671RBMS18977.273ENSCANG00000042152RBMS19576.487Colobus_angolensis_palliatus
ENSGACG00000005671RBMS110068.884ENSCGRG00001022833Rbms110069.359Cricetulus_griseus_chok1gshd
ENSGACG00000005671RBMS18975.568ENSCGRG00000008824Rbms19372.087Cricetulus_griseus_crigri
ENSGACG00000005671RBMS19964.341ENSCSEG00000000889rbms1a9964.433Cynoglossus_semilaevis
ENSGACG00000005671RBMS110084.635ENSCSEG00000010652RBMS19985.870Cynoglossus_semilaevis
ENSGACG00000005671RBMS110084.143ENSCVAG00000002027RBMS110084.143Cyprinodon_variegatus
ENSGACG00000005671RBMS19965.375ENSCVAG00000014698rbms1a9965.464Cyprinodon_variegatus
ENSGACG00000005671RBMS110071.357ENSDARG00000074023rbms1a9971.357Danio_rerio
ENSGACG00000005671RBMS18973.913ENSDNOG00000040691RBMS19573.713Dasypus_novemcinctus
ENSGACG00000005671RBMS18976.989ENSDORG00000007103Rbms19572.900Dipodomys_ordii
ENSGACG00000005671RBMS18967.045ENSETEG00000012135RBMS19366.856Echinops_telfairi
ENSGACG00000005671RBMS19774.550ENSEASG00005023132RBMS110073.827Equus_asinus_asinus
ENSGACG00000005671RBMS19771.111ENSECAG00000019894RBMS110070.546Equus_caballus
ENSGACG00000005671RBMS16889.796ENSEEUG00000005628RBMS16688.000Erinaceus_europaeus
ENSGACG00000005671RBMS19671.504ENSELUG00000019328RBMS19471.240Esox_lucius
ENSGACG00000005671RBMS110067.005ENSELUG00000018923rbms1a10065.990Esox_lucius
ENSGACG00000005671RBMS18976.705ENSFCAG00000012524RBMS19575.921Felis_catus
ENSGACG00000005671RBMS18976.989ENSFALG00000004440RBMS19576.771Ficedula_albicollis
ENSGACG00000005671RBMS18976.989ENSFDAG00000015692RBMS19674.103Fukomys_damarensis
ENSGACG00000005671RBMS19965.375ENSFHEG00000005662rbms1a9771.782Fundulus_heteroclitus
ENSGACG00000005671RBMS110084.910ENSFHEG00000000720RBMS110084.910Fundulus_heteroclitus
ENSGACG00000005671RBMS18866.197ENSGMOG00000000525rbms1a9966.197Gadus_morhua
ENSGACG00000005671RBMS19774.550ENSGALG00000011132RBMS110073.449Gallus_gallus
ENSGACG00000005671RBMS110083.503ENSGAFG00000007708RBMS110082.995Gambusia_affinis
ENSGACG00000005671RBMS18868.314ENSGAFG00000011633rbms1a9568.314Gambusia_affinis
ENSGACG00000005671RBMS110075.931ENSGAGG00000007866RBMS110075.186Gopherus_agassizii
ENSGACG00000005671RBMS18977.273ENSGGOG00000001264RBMS19576.487Gorilla_gorilla
ENSGACG00000005671RBMS19773.196ENSGGOG00000043756-10072.346Gorilla_gorilla
ENSGACG00000005671RBMS19965.891ENSHBUG00000004802rbms1a9965.464Haplochromis_burtoni
ENSGACG00000005671RBMS19582.713ENSHBUG00000004516RBMS19982.447Haplochromis_burtoni
ENSGACG00000005671RBMS18976.705ENSHGLG00000010387RBMS19971.501Heterocephalus_glaber_female
ENSGACG00000005671RBMS18976.705ENSHGLG00100014105RBMS19971.501Heterocephalus_glaber_male
ENSGACG00000005671RBMS110081.519ENSHCOG00000016668RBMS110080.759Hippocampus_comes
ENSGACG00000005671RBMS19965.375ENSHCOG00000020097rbms1a9965.464Hippocampus_comes
ENSGACG00000005671RBMS110072.475ENSIPUG00000010131RBMS19972.222Ictalurus_punctatus
ENSGACG00000005671RBMS110081.013ENSIPUG00000014677RBMS110080.000Ictalurus_punctatus
ENSGACG00000005671RBMS18977.273ENSSTOG00000012501RBMS19373.171Ictidomys_tridecemlineatus
ENSGACG00000005671RBMS18975.852ENSJJAG00000016543Rbms19572.358Jaculus_jaculus
ENSGACG00000005671RBMS110084.810ENSKMAG00000013911RBMS110084.557Kryptolebias_marmoratus
ENSGACG00000005671RBMS19963.566ENSKMAG00000011839-9963.660Kryptolebias_marmoratus
ENSGACG00000005671RBMS110089.620ENSLBEG00000005787RBMS110089.367Labrus_bergylta
ENSGACG00000005671RBMS19965.375ENSLBEG00000025962rbms1a9965.464Labrus_bergylta
ENSGACG00000005671RBMS110074.194ENSLACG00000004324RBMS19973.945Latimeria_chalumnae
ENSGACG00000005671RBMS110079.241ENSLOCG00000008622rbms1a10078.987Lepisosteus_oculatus
ENSGACG00000005671RBMS18975.852ENSLAFG00000017217RBMS19275.637Loxodonta_africana
ENSGACG00000005671RBMS18977.273ENSMFAG00000000274RBMS19576.487Macaca_fascicularis
ENSGACG00000005671RBMS19771.358ENSMMUG00000016825RBMS110070.784Macaca_mulatta
ENSGACG00000005671RBMS18977.273ENSMNEG00000039425RBMS19576.487Macaca_nemestrina
ENSGACG00000005671RBMS18976.989ENSMLEG00000031517RBMS19576.204Mandrillus_leucophaeus
ENSGACG00000005671RBMS19964.083ENSMAMG00000005018rbms1a9964.175Mastacembelus_armatus
ENSGACG00000005671RBMS110086.041ENSMAMG00000003159-10086.294Mastacembelus_armatus
ENSGACG00000005671RBMS19965.891ENSMZEG00005005661rbms1a9965.464Maylandia_zebra
ENSGACG00000005671RBMS18485.455ENSMZEG00005007313RBMS19285.455Maylandia_zebra
ENSGACG00000005671RBMS18977.557ENSMGAG00000011054RBMS110076.292Meleagris_gallopavo
ENSGACG00000005671RBMS110069.359ENSMAUG00000008550Rbms110069.834Mesocricetus_auratus
ENSGACG00000005671RBMS18976.705ENSMICG00000008325RBMS19276.487Microcebus_murinus
ENSGACG00000005671RBMS110069.121ENSMOCG00000022617Rbms110069.596Microtus_ochrogaster
ENSGACG00000005671RBMS110088.354ENSMMOG00000003707RBMS110088.101Mola_mola
ENSGACG00000005671RBMS19963.049ENSMMOG00000018249rbms1a9963.144Mola_mola
ENSGACG00000005671RBMS18977.557ENSMODG00000005250RBMS18777.337Monodelphis_domestica
ENSGACG00000005671RBMS19964.858ENSMALG00000014235rbms1a9964.948Monopterus_albus
ENSGACG00000005671RBMS19686.472ENSMALG00000015715-10087.212Monopterus_albus
ENSGACG00000005671RBMS19969.305MGP_CAROLIEiJ_G0023586Rbms19969.784Mus_caroli
ENSGACG00000005671RBMS19969.544ENSMUSG00000026970Rbms19970.024Mus_musculus
ENSGACG00000005671RBMS19971.820MGP_PahariEiJ_G0025037Rbms110071.852Mus_pahari
ENSGACG00000005671RBMS19969.544MGP_SPRETEiJ_G0024508Rbms19477.540Mus_spretus
ENSGACG00000005671RBMS18973.098ENSMPUG00000000539RBMS18772.900Mustela_putorius_furo
ENSGACG00000005671RBMS18972.162ENSMLUG00000008762RBMS18871.968Myotis_lucifugus
ENSGACG00000005671RBMS110069.121ENSNGAG00000013636Rbms110069.596Nannospalax_galili
ENSGACG00000005671RBMS19961.499ENSNBRG00000020217rbms1a9961.082Neolamprologus_brichardi
ENSGACG00000005671RBMS18981.948ENSNBRG00000015151RBMS19481.948Neolamprologus_brichardi
ENSGACG00000005671RBMS18977.273ENSNLEG00000001667RBMS19576.487Nomascus_leucogenys
ENSGACG00000005671RBMS18165.839ENSMEUG00000000746RBMS110065.839Notamacropus_eugenii
ENSGACG00000005671RBMS18970.455ENSOPRG00000012431RBMS18770.255Ochotona_princeps
ENSGACG00000005671RBMS18976.136ENSODEG00000013934RBMS19572.629Octodon_degus
ENSGACG00000005671RBMS19965.891ENSONIG00000003329rbms1a9966.408Oreochromis_niloticus
ENSGACG00000005671RBMS110084.557ENSONIG00000008934RBMS110084.304Oreochromis_niloticus
ENSGACG00000005671RBMS16648.837ENSOANG00000004477-9951.852Ornithorhynchus_anatinus
ENSGACG00000005671RBMS18977.841ENSOANG00000006166RBMS18977.620Ornithorhynchus_anatinus
ENSGACG00000005671RBMS18976.705ENSOCUG00000017365RBMS18376.487Oryctolagus_cuniculus
ENSGACG00000005671RBMS19962.532ENSORLG00000003917rbms1a9962.629Oryzias_latipes
ENSGACG00000005671RBMS110079.592ENSORLG00000016818RBMS19980.612Oryzias_latipes
ENSGACG00000005671RBMS110079.592ENSORLG00020022335RBMS19980.612Oryzias_latipes_hni
ENSGACG00000005671RBMS19962.274ENSORLG00020018663rbms1a9962.371Oryzias_latipes_hni
ENSGACG00000005671RBMS110080.102ENSORLG00015018208RBMS19981.122Oryzias_latipes_hsok
ENSGACG00000005671RBMS19962.532ENSORLG00015016556rbms1a9962.629Oryzias_latipes_hsok
ENSGACG00000005671RBMS110081.841ENSOMEG00000002394RBMS19981.841Oryzias_melastigma
ENSGACG00000005671RBMS18976.554ENSOGAG00000002900RBMS19576.338Otolemur_garnettii
ENSGACG00000005671RBMS18976.136ENSOARG00000006870RBMS19572.237Ovis_aries
ENSGACG00000005671RBMS18977.273ENSPPAG00000040083RBMS19277.054Pan_paniscus
ENSGACG00000005671RBMS18974.432ENSPPAG00000036520-9374.221Pan_paniscus
ENSGACG00000005671RBMS18976.705ENSPPRG00000005040RBMS19575.921Panthera_pardus
ENSGACG00000005671RBMS18976.705ENSPTIG00000021240RBMS19575.921Panthera_tigris_altaica
ENSGACG00000005671RBMS18977.273ENSPTRG00000052304RBMS19277.054Pan_troglodytes
ENSGACG00000005671RBMS18975.000ENSPTRG00000039358-9969.855Pan_troglodytes
ENSGACG00000005671RBMS18977.273ENSPANG00000001383RBMS19277.054Papio_anubis
ENSGACG00000005671RBMS110076.826ENSPKIG00000001498rbms1a10077.078Paramormyrops_kingsleyae
ENSGACG00000005671RBMS110077.411ENSPKIG00000012818rbms1a10077.157Paramormyrops_kingsleyae
ENSGACG00000005671RBMS19674.674ENSPSIG00000010240RBMS19574.805Pelodiscus_sinensis
ENSGACG00000005671RBMS18682.738ENSPMGG00000006310RBMS19677.937Periophthalmus_magnuspinnatus
ENSGACG00000005671RBMS19961.499ENSPMGG00000004341rbms1a9961.082Periophthalmus_magnuspinnatus
ENSGACG00000005671RBMS19770.617ENSPEMG00000009449Rbms19671.111Peromyscus_maniculatus_bairdii
ENSGACG00000005671RBMS110073.827ENSPCIG00000018405RBMS110073.827Phascolarctos_cinereus
ENSGACG00000005671RBMS19965.633ENSPFOG00000016116rbms1a9965.722Poecilia_formosa
ENSGACG00000005671RBMS110084.557ENSPFOG00000017483RBMS110084.304Poecilia_formosa
ENSGACG00000005671RBMS110084.518ENSPLAG00000000920RBMS110084.010Poecilia_latipinna
ENSGACG00000005671RBMS19965.633ENSPLAG00000013864rbms1a9965.722Poecilia_latipinna
ENSGACG00000005671RBMS110084.557ENSPMEG00000015838RBMS110084.304Poecilia_mexicana
ENSGACG00000005671RBMS19965.633ENSPMEG00000016185rbms1a9965.722Poecilia_mexicana
ENSGACG00000005671RBMS110084.557ENSPREG00000008146RBMS110084.304Poecilia_reticulata
ENSGACG00000005671RBMS19965.633ENSPREG00000020161rbms1a9965.722Poecilia_reticulata
ENSGACG00000005671RBMS18973.641ENSPPYG00000012879-8773.442Pongo_abelii
ENSGACG00000005671RBMS18971.307ENSPCAG00000009673RBMS18771.105Procavia_capensis
ENSGACG00000005671RBMS18976.705ENSPCOG00000027294RBMS19575.921Propithecus_coquereli
ENSGACG00000005671RBMS18965.341ENSPVAG00000010429RBMS18765.156Pteropus_vampyrus
ENSGACG00000005671RBMS110083.291ENSPNYG00000002643RBMS110083.038Pundamilia_nyererei
ENSGACG00000005671RBMS110081.818ENSPNAG00000023479RBMS110081.061Pygocentrus_nattereri
ENSGACG00000005671RBMS19770.909ENSPNAG00000010225rbms1a9870.649Pygocentrus_nattereri
ENSGACG00000005671RBMS18875.862ENSRNOG00000008482Rbms19072.329Rattus_norvegicus
ENSGACG00000005671RBMS110070.546ENSRBIG00000044262RBMS110071.021Rhinopithecus_bieti
ENSGACG00000005671RBMS110070.784ENSRROG00000043108RBMS110071.259Rhinopithecus_roxellana
ENSGACG00000005671RBMS18977.273ENSSBOG00000034705RBMS19577.054Saimiri_boliviensis_boliviensis
ENSGACG00000005671RBMS18977.557ENSSHAG00000012271RBMS110072.174Sarcophilus_harrisii
ENSGACG00000005671RBMS110078.734ENSSFOG00015022929rbms110078.481Scleropages_formosus
ENSGACG00000005671RBMS18976.724ENSSFOG00015014493rbms1a9576.791Scleropages_formosus
ENSGACG00000005671RBMS110087.056ENSSMAG00000012152RBMS19687.563Scophthalmus_maximus
ENSGACG00000005671RBMS18867.442ENSSMAG00000012722rbms1a9567.442Scophthalmus_maximus
ENSGACG00000005671RBMS110088.608ENSSDUG00000018803RBMS110088.354Seriola_dumerili
ENSGACG00000005671RBMS19965.891ENSSDUG00000020602rbms1a9965.979Seriola_dumerili
ENSGACG00000005671RBMS110088.861ENSSLDG00000016556RBMS110088.608Seriola_lalandi_dorsalis
ENSGACG00000005671RBMS19965.891ENSSLDG00000009495rbms1a9965.979Seriola_lalandi_dorsalis
ENSGACG00000005671RBMS18953.276ENSSARG00000011085RBMS18753.125Sorex_araneus
ENSGACG00000005671RBMS18977.557ENSSPUG00000017163RBMS19477.337Sphenodon_punctatus
ENSGACG00000005671RBMS19966.150ENSSPAG00000005371rbms1a9966.237Stegastes_partitus
ENSGACG00000005671RBMS110089.114ENSSPAG00000000059RBMS110088.861Stegastes_partitus
ENSGACG00000005671RBMS19772.165ENSSSCG00000015888RBMS110073.086Sus_scrofa
ENSGACG00000005671RBMS18976.989ENSTGUG00000006606RBMS18776.771Taeniopygia_guttata
ENSGACG00000005671RBMS110082.872ENSTRUG00000005466-10083.375Takifugu_rubripes
ENSGACG00000005671RBMS19963.590ENSTRUG00000017155rbms1a9963.683Takifugu_rubripes
ENSGACG00000005671RBMS18865.507ENSTNIG00000009477rbms1a9963.158Tetraodon_nigroviridis
ENSGACG00000005671RBMS19485.286ENSTNIG00000016496RBMS19787.356Tetraodon_nigroviridis
ENSGACG00000005671RBMS18968.466ENSTBEG00000016156RBMS19368.272Tupaia_belangeri
ENSGACG00000005671RBMS18976.420ENSTTRG00000011058RBMS19376.204Tursiops_truncatus
ENSGACG00000005671RBMS18976.420ENSUAMG00000022331RBMS18776.204Ursus_americanus
ENSGACG00000005671RBMS18976.420ENSUMAG00000008605RBMS19176.204Ursus_maritimus
ENSGACG00000005671RBMS18379.817ENSVPAG00000002716RBMS18779.573Vicugna_pacos
ENSGACG00000005671RBMS18976.136ENSVVUG00000018682RBMS19575.921Vulpes_vulpes
ENSGACG00000005671RBMS19669.895ENSXETG00000016204rbms110069.895Xenopus_tropicalis
ENSGACG00000005671RBMS19962.791ENSXCOG00000001659rbms1a9962.887Xiphophorus_couchianus
ENSGACG00000005671RBMS18985.673ENSXCOG00000000211RBMS19585.920Xiphophorus_couchianus
ENSGACG00000005671RBMS110083.291ENSXMAG00000011405RBMS110083.038Xiphophorus_maculatus
ENSGACG00000005671RBMS19965.375ENSXMAG00000001802rbms1a9965.464Xiphophorus_maculatus

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