EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000005865 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: si:dkey-85a20.4
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 11149 bases
Position: chrgroupVI:7056360-7067508
Accession: ZDB-GENE-090313-347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000007768	SpoU_methylase	PF00588.19	8.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000007787	-	4676	-	ENSGACP00000007768	1408 (aa)	-	G3NR02

Gene Model

Click here to download ENSGACG00000005865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000005865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000005865	si:dkey-85a20.4	99	45.263	ENSG00000059588	TARBP1	86	45.295	Homo_sapiens
ENSGACG00000005865	si:dkey-85a20.4	99	77.426	ENSAPOG00000016419	si:dkey-85a20.4	86	77.426	Acanthochromis_polyacanthus
ENSGACG00000005865	si:dkey-85a20.4	97	44.188	ENSAMEG00000003359	TARBP1	99	44.300	Ailuropoda_melanoleuca
ENSGACG00000005865	si:dkey-85a20.4	99	76.231	ENSATEG00000020266	si:dkey-85a20.4	86	76.231	Anabas_testudineus
ENSGACG00000005865	si:dkey-85a20.4	97	45.090	ENSAPLG00000007666	TARBP1	100	45.090	Anas_platyrhynchos
ENSGACG00000005865	si:dkey-85a20.4	97	42.909	ENSACAG00000001142	TARBP1	86	42.736	Anolis_carolinensis
ENSGACG00000005865	si:dkey-85a20.4	99	44.413	ENSANAG00000022031	TARBP1	88	44.320	Aotus_nancymaae
ENSGACG00000005865	si:dkey-85a20.4	91	54.102	ENSBTAG00000004517	TARBP1	84	54.102	Bos_taurus
ENSGACG00000005865	si:dkey-85a20.4	99	44.811	ENSCJAG00000018155	TARBP1	86	44.864	Callithrix_jacchus
ENSGACG00000005865	si:dkey-85a20.4	99	44.554	ENSCAFG00000011533	TARBP1	98	44.554	Canis_familiaris
ENSGACG00000005865	si:dkey-85a20.4	99	44.531	ENSCAFG00020027141	TARBP1	85	44.531	Canis_lupus_dingo
ENSGACG00000005865	si:dkey-85a20.4	99	45.377	ENSCHIG00000011437	TARBP1	85	45.326	Capra_hircus
ENSGACG00000005865	si:dkey-85a20.4	93	45.091	ENSTSYG00000010382	TARBP1	96	45.242	Carlito_syrichta
ENSGACG00000005865	si:dkey-85a20.4	91	42.417	ENSCAPG00000010831	TARBP1	99	42.417	Cavia_aperea
ENSGACG00000005865	si:dkey-85a20.4	99	44.933	ENSCPOG00000013995	TARBP1	85	45.166	Cavia_porcellus
ENSGACG00000005865	si:dkey-85a20.4	96	53.257	ENSCCAG00000037278	TARBP1	85	53.257	Cebus_capucinus
ENSGACG00000005865	si:dkey-85a20.4	99	45.231	ENSCATG00000011754	TARBP1	86	45.084	Cercocebus_atys
ENSGACG00000005865	si:dkey-85a20.4	93	44.628	ENSCLAG00000003655	TARBP1	96	44.628	Chinchilla_lanigera
ENSGACG00000005865	si:dkey-85a20.4	92	45.967	ENSCSAG00000010100	TARBP1	100	45.967	Chlorocebus_sabaeus
ENSGACG00000005865	si:dkey-85a20.4	85	49.351	ENSCPBG00000005587	TARBP1	85	48.071	Chrysemys_picta_bellii
ENSGACG00000005865	si:dkey-85a20.4	97	45.435	ENSCANG00000034343	TARBP1	99	45.435	Colobus_angolensis_palliatus
ENSGACG00000005865	si:dkey-85a20.4	99	45.191	ENSCGRG00001016690	Tarbp1	87	45.120	Cricetulus_griseus_chok1gshd
ENSGACG00000005865	si:dkey-85a20.4	99	45.262	ENSCGRG00000016893	Tarbp1	94	45.120	Cricetulus_griseus_crigri
ENSGACG00000005865	si:dkey-85a20.4	99	65.502	ENSCSEG00000005255	si:dkey-85a20.4	86	68.357	Cynoglossus_semilaevis
ENSGACG00000005865	si:dkey-85a20.4	98	59.233	ENSDARG00000079055	si:dkey-85a20.4	99	70.847	Danio_rerio
ENSGACG00000005865	si:dkey-85a20.4	99	45.275	ENSDNOG00000008637	TARBP1	84	45.275	Dasypus_novemcinctus
ENSGACG00000005865	si:dkey-85a20.4	93	46.611	ENSDORG00000007984	Tarbp1	100	46.762	Dipodomys_ordii
ENSGACG00000005865	si:dkey-85a20.4	99	45.339	ENSEASG00005000252	TARBP1	86	45.519	Equus_asinus_asinus
ENSGACG00000005865	si:dkey-85a20.4	99	45.152	ENSECAG00000023673	TARBP1	84	46.835	Equus_caballus
ENSGACG00000005865	si:dkey-85a20.4	98	64.402	ENSELUG00000012193	si:dkey-85a20.4	86	64.331	Esox_lucius
ENSGACG00000005865	si:dkey-85a20.4	99	43.129	ENSFCAG00000014183	TARBP1	85	43.199	Felis_catus
ENSGACG00000005865	si:dkey-85a20.4	93	46.415	ENSFALG00000013565	TARBP1	99	46.386	Ficedula_albicollis
ENSGACG00000005865	si:dkey-85a20.4	91	44.186	ENSFDAG00000001308	TARBP1	99	44.186	Fukomys_damarensis
ENSGACG00000005865	si:dkey-85a20.4	82	76.596	ENSFHEG00000007565	si:dkey-85a20.4	80	76.596	Fundulus_heteroclitus
ENSGACG00000005865	si:dkey-85a20.4	100	64.880	ENSGMOG00000004549	si:dkey-85a20.4	100	64.880	Gadus_morhua
ENSGACG00000005865	si:dkey-85a20.4	92	49.688	ENSGALG00000011000	TARBP1	86	47.714	Gallus_gallus
ENSGACG00000005865	si:dkey-85a20.4	99	71.298	ENSGAFG00000007387	si:dkey-85a20.4	86	71.368	Gambusia_affinis
ENSGACG00000005865	si:dkey-85a20.4	97	46.032	ENSGAGG00000012102	TARBP1	89	45.866	Gopherus_agassizii
ENSGACG00000005865	si:dkey-85a20.4	98	44.181	ENSGGOG00000022879	TARBP1	99	44.238	Gorilla_gorilla
ENSGACG00000005865	si:dkey-85a20.4	99	76.761	ENSHBUG00000008877	si:dkey-85a20.4	86	76.549	Haplochromis_burtoni
ENSGACG00000005865	si:dkey-85a20.4	99	45.056	ENSHGLG00000011592	TARBP1	85	45.291	Heterocephalus_glaber_female
ENSGACG00000005865	si:dkey-85a20.4	99	45.148	ENSHGLG00100015169	TARBP1	94	45.409	Heterocephalus_glaber_male
ENSGACG00000005865	si:dkey-85a20.4	98	56.080	ENSIPUG00000005249	si:dkey-85a20.4	83	56.152	Ictalurus_punctatus
ENSGACG00000005865	si:dkey-85a20.4	96	45.062	ENSSTOG00000032291	TARBP1	96	45.208	Ictidomys_tridecemlineatus
ENSGACG00000005865	si:dkey-85a20.4	99	41.661	ENSJJAG00000017840	Tarbp1	94	41.894	Jaculus_jaculus
ENSGACG00000005865	si:dkey-85a20.4	85	67.960	ENSKMAG00000017546	si:dkey-85a20.4	81	67.906	Kryptolebias_marmoratus
ENSGACG00000005865	si:dkey-85a20.4	80	77.291	ENSLBEG00000012132	si:dkey-85a20.4	80	77.291	Labrus_bergylta
ENSGACG00000005865	si:dkey-85a20.4	99	45.933	ENSLACG00000004337	TARBP1	85	45.863	Latimeria_chalumnae
ENSGACG00000005865	si:dkey-85a20.4	99	56.286	ENSLOCG00000016214	si:dkey-85a20.4	85	56.214	Lepisosteus_oculatus
ENSGACG00000005865	si:dkey-85a20.4	99	45.403	ENSLAFG00000011394	TARBP1	88	45.583	Loxodonta_africana
ENSGACG00000005865	si:dkey-85a20.4	99	43.938	ENSMFAG00000041068	TARBP1	87	43.719	Macaca_fascicularis
ENSGACG00000005865	si:dkey-85a20.4	99	43.868	ENSMMUG00000021703	TARBP1	86	43.649	Macaca_mulatta
ENSGACG00000005865	si:dkey-85a20.4	99	45.263	ENSMNEG00000045002	TARBP1	86	45.046	Macaca_nemestrina
ENSGACG00000005865	si:dkey-85a20.4	97	45.336	ENSMLEG00000044182	TARBP1	100	45.336	Mandrillus_leucophaeus
ENSGACG00000005865	si:dkey-85a20.4	99	76.079	ENSMAMG00000021760	si:dkey-85a20.4	87	76.079	Mastacembelus_armatus
ENSGACG00000005865	si:dkey-85a20.4	99	76.761	ENSMZEG00005005751	si:dkey-85a20.4	86	76.549	Maylandia_zebra
ENSGACG00000005865	si:dkey-85a20.4	99	45.145	ENSMAUG00000020968	Tarbp1	87	45.074	Mesocricetus_auratus
ENSGACG00000005865	si:dkey-85a20.4	99	40.028	ENSMICG00000015280	TARBP1	84	40.028	Microcebus_murinus
ENSGACG00000005865	si:dkey-85a20.4	99	44.273	ENSMOCG00000004128	Tarbp1	87	44.202	Microtus_ochrogaster
ENSGACG00000005865	si:dkey-85a20.4	98	72.325	ENSMMOG00000007795	si:dkey-85a20.4	85	72.357	Mola_mola
ENSGACG00000005865	si:dkey-85a20.4	99	44.170	ENSMODG00000008504	TARBP1	84	44.170	Monodelphis_domestica
ENSGACG00000005865	si:dkey-85a20.4	98	75.144	ENSMALG00000002916	si:dkey-85a20.4	85	75.216	Monopterus_albus
ENSGACG00000005865	si:dkey-85a20.4	99	44.319	MGP_CAROLIEiJ_G0031729	Tarbp1	78	60.153	Mus_caroli
ENSGACG00000005865	si:dkey-85a20.4	99	44.569	ENSMUSG00000090290	Tarbp1	88	44.476	Mus_musculus
ENSGACG00000005865	si:dkey-85a20.4	99	45.011	MGP_PahariEiJ_G0023326	Tarbp1	87	44.940	Mus_pahari
ENSGACG00000005865	si:dkey-85a20.4	99	44.825	MGP_SPRETEiJ_G0032846	Tarbp1	88	44.755	Mus_spretus
ENSGACG00000005865	si:dkey-85a20.4	89	45.212	ENSMPUG00000002802	TARBP1	99	45.133	Mustela_putorius_furo
ENSGACG00000005865	si:dkey-85a20.4	96	43.092	ENSMLUG00000002414	TARBP1	99	43.214	Myotis_lucifugus
ENSGACG00000005865	si:dkey-85a20.4	99	45.238	ENSNLEG00000002518	TARBP1	86	45.168	Nomascus_leucogenys
ENSGACG00000005865	si:dkey-85a20.4	61	53.191	ENSMEUG00000011370	-	53	53.191	Notamacropus_eugenii
ENSGACG00000005865	si:dkey-85a20.4	79	52.745	ENSOPRG00000013822	TARBP1	68	52.579	Ochotona_princeps
ENSGACG00000005865	si:dkey-85a20.4	99	44.366	ENSODEG00000005238	TARBP1	88	44.629	Octodon_degus
ENSGACG00000005865	si:dkey-85a20.4	99	76.777	ENSONIG00000009789	si:dkey-85a20.4	100	76.777	Oreochromis_niloticus
ENSGACG00000005865	si:dkey-85a20.4	99	44.940	ENSOCUG00000017418	TARBP1	85	44.915	Oryctolagus_cuniculus
ENSGACG00000005865	si:dkey-85a20.4	99	68.028	ENSORLG00000010529	si:dkey-85a20.4	86	68.169	Oryzias_latipes
ENSGACG00000005865	si:dkey-85a20.4	99	68.099	ENSORLG00020019264	si:dkey-85a20.4	86	68.239	Oryzias_latipes_hni
ENSGACG00000005865	si:dkey-85a20.4	99	67.817	ENSORLG00015003276	si:dkey-85a20.4	86	67.958	Oryzias_latipes_hsok
ENSGACG00000005865	si:dkey-85a20.4	99	43.199	ENSOGAG00000002379	TARBP1	86	43.199	Otolemur_garnettii
ENSGACG00000005865	si:dkey-85a20.4	99	45.526	ENSOARG00000003434	TARBP1	92	45.506	Ovis_aries
ENSGACG00000005865	si:dkey-85a20.4	97	45.743	ENSPPAG00000028097	TARBP1	99	45.794	Pan_paniscus
ENSGACG00000005865	si:dkey-85a20.4	97	43.350	ENSPPRG00000013561	TARBP1	88	43.601	Panthera_pardus
ENSGACG00000005865	si:dkey-85a20.4	95	44.672	ENSPTIG00000009281	TARBP1	99	44.672	Panthera_tigris_altaica
ENSGACG00000005865	si:dkey-85a20.4	99	45.474	ENSPTRG00000002124	TARBP1	86	45.378	Pan_troglodytes
ENSGACG00000005865	si:dkey-85a20.4	99	45.193	ENSPANG00000021933	TARBP1	86	45.046	Papio_anubis
ENSGACG00000005865	si:dkey-85a20.4	99	59.972	ENSPKIG00000016716	si:dkey-85a20.4	85	59.831	Paramormyrops_kingsleyae
ENSGACG00000005865	si:dkey-85a20.4	91	46.160	ENSPSIG00000010699	TARBP1	99	46.237	Pelodiscus_sinensis
ENSGACG00000005865	si:dkey-85a20.4	99	44.571	ENSPEMG00000006888	Tarbp1	92	44.571	Peromyscus_maniculatus_bairdii
ENSGACG00000005865	si:dkey-85a20.4	89	66.502	ENSPCIG00000029710	TARBP1	83	66.502	Phascolarctos_cinereus
ENSGACG00000005865	si:dkey-85a20.4	99	70.204	ENSPFOG00000013020	si:dkey-85a20.4	99	70.204	Poecilia_formosa
ENSGACG00000005865	si:dkey-85a20.4	99	70.613	ENSPLAG00000006044	si:dkey-85a20.4	86	70.754	Poecilia_latipinna
ENSGACG00000005865	si:dkey-85a20.4	99	70.472	ENSPMEG00000017857	si:dkey-85a20.4	86	70.613	Poecilia_mexicana
ENSGACG00000005865	si:dkey-85a20.4	99	70.190	ENSPREG00000022753	si:dkey-85a20.4	86	70.331	Poecilia_reticulata
ENSGACG00000005865	si:dkey-85a20.4	92	44.794	ENSPPYG00000000102	TARBP1	85	44.861	Pongo_abelii
ENSGACG00000005865	si:dkey-85a20.4	85	51.550	ENSPCAG00000004808	TARBP1	74	51.550	Procavia_capensis
ENSGACG00000005865	si:dkey-85a20.4	99	43.191	ENSPCOG00000005666	TARBP1	85	43.191	Propithecus_coquereli
ENSGACG00000005865	si:dkey-85a20.4	99	39.353	ENSPVAG00000014798	TARBP1	85	39.498	Pteropus_vampyrus
ENSGACG00000005865	si:dkey-85a20.4	99	72.663	ENSPNYG00000019135	si:dkey-85a20.4	85	72.450	Pundamilia_nyererei
ENSGACG00000005865	si:dkey-85a20.4	99	43.411	ENSRNOG00000053574	Tarbp1	87	43.270	Rattus_norvegicus
ENSGACG00000005865	si:dkey-85a20.4	99	42.072	ENSRBIG00000043362	TARBP1	94	42.565	Rhinopithecus_bieti
ENSGACG00000005865	si:dkey-85a20.4	99	45.116	ENSRROG00000029527	TARBP1	90	45.116	Rhinopithecus_roxellana
ENSGACG00000005865	si:dkey-85a20.4	97	44.823	ENSSBOG00000034503	TARBP1	97	45.007	Saimiri_boliviensis_boliviensis
ENSGACG00000005865	si:dkey-85a20.4	96	43.764	ENSSHAG00000000013	TARBP1	99	43.764	Sarcophilus_harrisii
ENSGACG00000005865	si:dkey-85a20.4	98	59.286	ENSSFOG00015002660	si:dkey-85a20.4	97	61.045	Scleropages_formosus
ENSGACG00000005865	si:dkey-85a20.4	99	77.143	ENSSMAG00000007081	si:dkey-85a20.4	85	77.219	Scophthalmus_maximus
ENSGACG00000005865	si:dkey-85a20.4	99	75.423	ENSSDUG00000023566	si:dkey-85a20.4	86	75.704	Seriola_dumerili
ENSGACG00000005865	si:dkey-85a20.4	99	78.814	ENSSLDG00000020200	si:dkey-85a20.4	86	78.884	Seriola_lalandi_dorsalis
ENSGACG00000005865	si:dkey-85a20.4	87	57.011	ENSSARG00000012207	TARBP1	76	57.011	Sorex_araneus
ENSGACG00000005865	si:dkey-85a20.4	99	44.097	ENSSPUG00000015364	TARBP1	86	44.097	Sphenodon_punctatus
ENSGACG00000005865	si:dkey-85a20.4	99	78.200	ENSSPAG00000007213	si:dkey-85a20.4	86	78.200	Stegastes_partitus
ENSGACG00000005865	si:dkey-85a20.4	99	44.996	ENSSSCG00000010160	TARBP1	85	45.714	Sus_scrofa
ENSGACG00000005865	si:dkey-85a20.4	93	45.173	ENSTGUG00000010214	TARBP1	99	45.173	Taeniopygia_guttata
ENSGACG00000005865	si:dkey-85a20.4	97	71.604	ENSTNIG00000016586	si:dkey-85a20.4	100	71.604	Tetraodon_nigroviridis
ENSGACG00000005865	si:dkey-85a20.4	90	42.298	ENSTTRG00000008707	TARBP1	81	42.771	Tursiops_truncatus
ENSGACG00000005865	si:dkey-85a20.4	94	43.884	ENSUMAG00000006730	TARBP1	99	44.000	Ursus_maritimus
ENSGACG00000005865	si:dkey-85a20.4	76	74.194	ENSVPAG00000007665	TARBP1	74	74.194	Vicugna_pacos
ENSGACG00000005865	si:dkey-85a20.4	98	44.405	ENSVVUG00000007460	TARBP1	98	45.896	Vulpes_vulpes
ENSGACG00000005865	si:dkey-85a20.4	96	42.567	ENSXETG00000016224	tarbp1	99	42.888	Xenopus_tropicalis
ENSGACG00000005865	si:dkey-85a20.4	93	72.832	ENSXCOG00000011779	si:dkey-85a20.4	97	72.543	Xiphophorus_couchianus
ENSGACG00000005865	si:dkey-85a20.4	75	69.533	ENSXMAG00000009600	si:dkey-85a20.4	100	69.720	Xiphophorus_maculatus