EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000006084 (Gene tree)
Gene ID: -
Gene Symbol: srsf6a
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: serine/arginine-rich splicing factor 6a
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3843 bases
Position: chrgroupXII:7547483-7551325
Accession: ZDB-GENE-040426-2824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000008087	RRM_1	PF00076.22	1.1e-31	1	2
ENSGACP00000008087	RRM_1	PF00076.22	1.1e-31	2	2
ENSGACP00000008092	RRM_1	PF00076.22	1.2e-31	1	2
ENSGACP00000008092	RRM_1	PF00076.22	1.2e-31	2	2
ENSGACP00000008077	RRM_1	PF00076.22	1.5e-31	1	2
ENSGACP00000008077	RRM_1	PF00076.22	1.5e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000008096	-	1442	-	ENSGACP00000008077	394 (aa)	-	G3NRW0
ENSGACT00000008111	-	1121	-	ENSGACP00000008092	366 (aa)	-	G3NRX5
ENSGACT00000008106	-	1115	-	ENSGACP00000008087	350 (aa)	-	G3NRX0

Gene Model

Click here to download ENSGACG00000006084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000006084's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000006084	srsf6a	52	61.878	ENSGACG00000011761	srsf5a	69	65.143
ENSGACG00000006084	srsf6a	66	35.887	ENSGACG00000020621	srsf1b	65	42.771
ENSGACG00000006084	srsf6a	52	36.842	ENSGACG00000016921	srsf9	74	41.885
ENSGACG00000006084	srsf6a	51	73.514	ENSGACG00000002389	srsf4	55	73.370
ENSGACG00000006084	srsf6a	51	48.750	ENSGACG00000007834	srsf5b	83	57.576

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000006084	srsf6a	53	83.871	ENSG00000124193	SRSF6	98	61.194	Homo_sapiens
ENSGACG00000006084	srsf6a	61	62.037	ENSAMEG00000003710	SRSF6	87	51.183	Ailuropoda_melanoleuca
ENSGACG00000006084	srsf6a	94	70.435	ENSACIG00000023658	-	91	71.429	Amphilophus_citrinellus
ENSGACG00000006084	srsf6a	100	60.969	ENSACIG00000020091	-	95	81.395	Amphilophus_citrinellus
ENSGACG00000006084	srsf6a	51	77.228	ENSAOCG00000004309	-	97	58.974	Amphiprion_ocellaris
ENSGACG00000006084	srsf6a	93	74.545	ENSAPEG00000013086	-	93	73.352	Amphiprion_percula
ENSGACG00000006084	srsf6a	63	75.000	ENSAPEG00000020746	-	66	80.645	Amphiprion_percula
ENSGACG00000006084	srsf6a	53	81.522	ENSATEG00000007255	-	72	77.660	Anabas_testudineus
ENSGACG00000006084	srsf6a	53	83.243	ENSACAG00000002061	SRSF6	86	60.947	Anolis_carolinensis
ENSGACG00000006084	srsf6a	53	83.871	ENSANAG00000024080	SRSF6	98	61.194	Aotus_nancymaae
ENSGACG00000006084	srsf6a	53	85.484	ENSAMXG00000042692	-	96	85.926	Astyanax_mexicanus
ENSGACG00000006084	srsf6a	53	89.247	ENSAMXG00000003101	-	91	65.634	Astyanax_mexicanus
ENSGACG00000006084	srsf6a	53	83.871	ENSBTAG00000008527	SRSF6	98	61.940	Bos_taurus
ENSGACG00000006084	srsf6a	53	83.871	ENSCJAG00000048403	SRSF6	98	61.194	Callithrix_jacchus
ENSGACG00000006084	srsf6a	61	76.744	ENSCAFG00000009289	SRSF6	98	61.940	Canis_familiaris
ENSGACG00000006084	srsf6a	61	76.744	ENSCAFG00020013559	SRSF6	98	61.940	Canis_lupus_dingo
ENSGACG00000006084	srsf6a	53	83.871	ENSCHIG00000015890	-	98	61.940	Capra_hircus
ENSGACG00000006084	srsf6a	53	82.796	ENSCHIG00000009148	-	87	58.580	Capra_hircus
ENSGACG00000006084	srsf6a	53	61.828	ENSTSYG00000026476	SRSF6	85	46.313	Carlito_syrichta
ENSGACG00000006084	srsf6a	53	77.419	ENSCPOG00000011761	SRSF6	98	61.194	Cavia_porcellus
ENSGACG00000006084	srsf6a	53	82.796	ENSCCAG00000026018	-	98	61.194	Cebus_capucinus
ENSGACG00000006084	srsf6a	53	73.262	ENSCCAG00000018540	-	61	74.054	Cebus_capucinus
ENSGACG00000006084	srsf6a	53	83.871	ENSCATG00000030794	SRSF6	98	61.194	Cercocebus_atys
ENSGACG00000006084	srsf6a	53	83.871	ENSCLAG00000010247	SRSF6	98	61.194	Chinchilla_lanigera
ENSGACG00000006084	srsf6a	53	83.871	ENSCSAG00000014022	SRSF6	87	59.226	Chlorocebus_sabaeus
ENSGACG00000006084	srsf6a	53	83.422	ENSCPBG00000018200	SRSF6	87	63.422	Chrysemys_picta_bellii
ENSGACG00000006084	srsf6a	53	82.796	ENSCANG00000037774	-	87	58.631	Colobus_angolensis_palliatus
ENSGACG00000006084	srsf6a	53	61.828	ENSCANG00000042529	-	85	46.291	Colobus_angolensis_palliatus
ENSGACG00000006084	srsf6a	53	83.871	ENSCGRG00001022339	Srsf6	98	61.194	Cricetulus_griseus_chok1gshd
ENSGACG00000006084	srsf6a	67	78.022	ENSCSEG00000019782	SRSF6	90	59.846	Cynoglossus_semilaevis
ENSGACG00000006084	srsf6a	53	87.166	ENSDARG00000016783	srsf6b	91	91.860	Danio_rerio
ENSGACG00000006084	srsf6a	53	77.297	ENSDARG00000013729	srsf6a	92	61.905	Danio_rerio
ENSGACG00000006084	srsf6a	53	83.871	ENSDNOG00000008410	SRSF6	99	57.735	Dasypus_novemcinctus
ENSGACG00000006084	srsf6a	53	83.871	ENSDORG00000028378	Srsf6	98	61.194	Dipodomys_ordii
ENSGACG00000006084	srsf6a	53	80.108	ENSETEG00000006221	SRSF6	87	57.988	Echinops_telfairi
ENSGACG00000006084	srsf6a	53	83.871	ENSEASG00005023429	SRSF6	87	59.467	Equus_asinus_asinus
ENSGACG00000006084	srsf6a	53	83.871	ENSECAG00000023932	SRSF6	87	59.467	Equus_caballus
ENSGACG00000006084	srsf6a	51	85.484	ENSELUG00000024182	SRSF6	90	86.179	Esox_lucius
ENSGACG00000006084	srsf6a	52	87.978	ENSELUG00000013506	SRSF6	74	90.361	Esox_lucius
ENSGACG00000006084	srsf6a	61	76.744	ENSFCAG00000032814	SRSF6	87	59.347	Felis_catus
ENSGACG00000006084	srsf6a	53	61.828	ENSFDAG00000012191	SRSF6	86	45.133	Fukomys_damarensis
ENSGACG00000006084	srsf6a	95	75.556	ENSFHEG00000023065	srsf6a	93	65.537	Fundulus_heteroclitus
ENSGACG00000006084	srsf6a	52	85.792	ENSGMOG00000014458	srsf6a	93	67.045	Gadus_morhua
ENSGACG00000006084	srsf6a	67	59.322	ENSGMOG00000006105	srsf6a	62	78.488	Gadus_morhua
ENSGACG00000006084	srsf6a	53	83.957	ENSGALG00000000990	SRSF6	98	61.940	Gallus_gallus
ENSGACG00000006084	srsf6a	53	83.422	ENSGAGG00000003238	SRSF6	87	63.422	Gopherus_agassizii
ENSGACG00000006084	srsf6a	53	83.871	ENSGGOG00000009808	SRSF6	98	61.194	Gorilla_gorilla
ENSGACG00000006084	srsf6a	68	77.731	ENSHBUG00000006386	-	58	84.530	Haplochromis_burtoni
ENSGACG00000006084	srsf6a	55	67.179	ENSHGLG00000007701	-	57	68.362	Heterocephalus_glaber_female
ENSGACG00000006084	srsf6a	53	83.871	ENSHGLG00000007348	SRSF6	98	61.194	Heterocephalus_glaber_female
ENSGACG00000006084	srsf6a	53	61.828	ENSHGLG00100005043	SRSF6	86	46.313	Heterocephalus_glaber_male
ENSGACG00000006084	srsf6a	63	85.405	ENSHCOG00000002740	srsf6a	94	67.147	Hippocampus_comes
ENSGACG00000006084	srsf6a	53	83.333	ENSIPUG00000004776	-	81	86.740	Ictalurus_punctatus
ENSGACG00000006084	srsf6a	51	81.461	ENSIPUG00000016856	SRSF6	90	63.333	Ictalurus_punctatus
ENSGACG00000006084	srsf6a	53	83.871	ENSSTOG00000010866	SRSF6	98	61.194	Ictidomys_tridecemlineatus
ENSGACG00000006084	srsf6a	100	76.623	ENSKMAG00000011934	srsf6a	100	68.313	Kryptolebias_marmoratus
ENSGACG00000006084	srsf6a	93	70.554	ENSLBEG00000007356	srsf6a	95	72.805	Labrus_bergylta
ENSGACG00000006084	srsf6a	100	65.819	ENSLACG00000005466	SRSF6	88	61.012	Latimeria_chalumnae
ENSGACG00000006084	srsf6a	53	83.871	ENSMFAG00000036925	SRSF6	98	61.194	Macaca_fascicularis
ENSGACG00000006084	srsf6a	53	83.871	ENSMMUG00000006742	SRSF6	98	61.194	Macaca_mulatta
ENSGACG00000006084	srsf6a	51	83.333	ENSMNEG00000038270	-	87	58.631	Macaca_nemestrina
ENSGACG00000006084	srsf6a	53	83.333	ENSMNEG00000027392	-	98	60.448	Macaca_nemestrina
ENSGACG00000006084	srsf6a	62	88.649	ENSMAMG00000017161	srsf6a	93	77.874	Mastacembelus_armatus
ENSGACG00000006084	srsf6a	72	65.672	ENSMZEG00005020658	-	95	59.366	Maylandia_zebra
ENSGACG00000006084	srsf6a	92	59.403	ENSMZEG00005008032	-	57	84.530	Maylandia_zebra
ENSGACG00000006084	srsf6a	53	83.333	ENSMICG00000008537	SRSF6	98	61.194	Microcebus_murinus
ENSGACG00000006084	srsf6a	53	83.871	ENSMODG00000003107	SRSF6	88	61.607	Monodelphis_domestica
ENSGACG00000006084	srsf6a	74	77.465	ENSMALG00000003702	srsf6a	74	83.146	Monopterus_albus
ENSGACG00000006084	srsf6a	53	83.871	MGP_CAROLIEiJ_G0024606	Srsf6	98	61.194	Mus_caroli
ENSGACG00000006084	srsf6a	53	83.871	ENSMUSG00000016921	Srsf6	98	61.194	Mus_musculus
ENSGACG00000006084	srsf6a	53	83.871	MGP_PahariEiJ_G0026050	Srsf6	98	61.194	Mus_pahari
ENSGACG00000006084	srsf6a	53	83.871	MGP_SPRETEiJ_G0025528	Srsf6	98	61.194	Mus_spretus
ENSGACG00000006084	srsf6a	53	83.871	ENSMPUG00000017692	SRSF6	64	84.783	Mustela_putorius_furo
ENSGACG00000006084	srsf6a	53	56.338	ENSMLUG00000016618	SRSF6	87	45.257	Myotis_lucifugus
ENSGACG00000006084	srsf6a	53	83.871	ENSNGAG00000017560	Srsf6	98	61.194	Nannospalax_galili
ENSGACG00000006084	srsf6a	72	70.635	ENSNBRG00000014709	-	58	84.530	Neolamprologus_brichardi
ENSGACG00000006084	srsf6a	66	87.978	ENSNBRG00000001846	-	90	73.851	Neolamprologus_brichardi
ENSGACG00000006084	srsf6a	53	83.871	ENSNLEG00000006524	SRSF6	98	61.194	Nomascus_leucogenys
ENSGACG00000006084	srsf6a	53	83.871	ENSMEUG00000014615	SRSF6	98	60.651	Notamacropus_eugenii
ENSGACG00000006084	srsf6a	53	83.243	ENSONIG00000020247	-	96	54.522	Oreochromis_niloticus
ENSGACG00000006084	srsf6a	52	93.443	ENSONIG00000001925	-	100	66.111	Oreochromis_niloticus
ENSGACG00000006084	srsf6a	52	49.451	ENSOCUG00000023999	-	70	52.542	Oryctolagus_cuniculus
ENSGACG00000006084	srsf6a	61	58.039	ENSOCUG00000009785	-	63	66.842	Oryctolagus_cuniculus
ENSGACG00000006084	srsf6a	58	79.775	ENSORLG00000003530	srsf6a	94	60.574	Oryzias_latipes
ENSGACG00000006084	srsf6a	58	79.213	ENSORLG00015009410	srsf6a	94	60.313	Oryzias_latipes_hsok
ENSGACG00000006084	srsf6a	53	72.581	ENSOMEG00000006001	srsf6a	93	64.211	Oryzias_melastigma
ENSGACG00000006084	srsf6a	53	83.333	ENSOGAG00000014468	SRSF6	96	58.028	Otolemur_garnettii
ENSGACG00000006084	srsf6a	53	80.108	ENSOARG00000003117	SRSF6	87	57.988	Ovis_aries
ENSGACG00000006084	srsf6a	53	83.333	ENSPPAG00000034327	-	87	58.929	Pan_paniscus
ENSGACG00000006084	srsf6a	91	56.250	ENSPPAG00000043131	-	97	52.976	Pan_paniscus
ENSGACG00000006084	srsf6a	61	76.744	ENSPPRG00000008917	SRSF6	87	59.347	Panthera_pardus
ENSGACG00000006084	srsf6a	53	78.378	ENSPTIG00000021305	-	64	57.468	Panthera_tigris_altaica
ENSGACG00000006084	srsf6a	91	56.250	ENSPTRG00000046274	-	97	52.976	Pan_troglodytes
ENSGACG00000006084	srsf6a	53	83.871	ENSPTRG00000044686	-	98	61.194	Pan_troglodytes
ENSGACG00000006084	srsf6a	53	83.871	ENSPANG00000035224	SRSF6	98	61.194	Papio_anubis
ENSGACG00000006084	srsf6a	96	79.221	ENSPKIG00000018463	-	81	90.244	Paramormyrops_kingsleyae
ENSGACG00000006084	srsf6a	51	70.652	ENSPKIG00000015703	-	98	65.753	Paramormyrops_kingsleyae
ENSGACG00000006084	srsf6a	95	73.913	ENSPMGG00000014963	srsf6a	71	89.730	Periophthalmus_magnuspinnatus
ENSGACG00000006084	srsf6a	53	83.871	ENSPCIG00000003820	SRSF6	98	61.194	Phascolarctos_cinereus
ENSGACG00000006084	srsf6a	53	89.655	ENSPFOG00000006437	srsf6a	100	68.558	Poecilia_formosa
ENSGACG00000006084	srsf6a	95	72.500	ENSPLAG00000009243	srsf6a	80	88.976	Poecilia_latipinna
ENSGACG00000006084	srsf6a	63	67.213	ENSPMEG00000006056	SRSF6	89	64.574	Poecilia_mexicana
ENSGACG00000006084	srsf6a	95	74.359	ENSPMEG00000006042	SRSF6	93	71.751	Poecilia_mexicana
ENSGACG00000006084	srsf6a	53	83.871	ENSPPYG00000011019	SRSF6	87	59.226	Pongo_abelii
ENSGACG00000006084	srsf6a	53	81.183	ENSPCAG00000010954	SRSF6	91	57.396	Procavia_capensis
ENSGACG00000006084	srsf6a	53	83.333	ENSPCOG00000026364	SRSF6	98	61.194	Propithecus_coquereli
ENSGACG00000006084	srsf6a	53	83.333	ENSPVAG00000015232	SRSF6	54	84.239	Pteropus_vampyrus
ENSGACG00000006084	srsf6a	53	83.243	ENSPNYG00000004944	-	58	84.530	Pundamilia_nyererei
ENSGACG00000006084	srsf6a	63	87.978	ENSPNYG00000011272	-	89	73.088	Pundamilia_nyererei
ENSGACG00000006084	srsf6a	53	83.871	ENSRNOG00000006380	Srsf6	88	58.929	Rattus_norvegicus
ENSGACG00000006084	srsf6a	53	82.796	ENSRBIG00000041414	SRSF6	62	90.000	Rhinopithecus_bieti
ENSGACG00000006084	srsf6a	53	83.871	ENSRROG00000029989	SRSF6	98	61.194	Rhinopithecus_roxellana
ENSGACG00000006084	srsf6a	52	69.399	ENSSBOG00000034078	-	54	71.839	Saimiri_boliviensis_boliviensis
ENSGACG00000006084	srsf6a	53	82.796	ENSSBOG00000033708	-	98	61.194	Saimiri_boliviensis_boliviensis
ENSGACG00000006084	srsf6a	53	83.871	ENSSHAG00000012805	SRSF6	88	61.607	Sarcophilus_harrisii
ENSGACG00000006084	srsf6a	95	67.236	ENSSFOG00015019681	-	93	67.222	Scleropages_formosus
ENSGACG00000006084	srsf6a	52	87.432	ENSSFOG00015015169	SRSF6	93	66.763	Scleropages_formosus
ENSGACG00000006084	srsf6a	53	80.978	ENSSMAG00000017447	-	55	82.065	Scophthalmus_maximus
ENSGACG00000006084	srsf6a	70	76.271	ENSSMAG00000014819	-	84	64.706	Scophthalmus_maximus
ENSGACG00000006084	srsf6a	63	88.649	ENSSDUG00000016097	srsf6a	93	76.149	Seriola_dumerili
ENSGACG00000006084	srsf6a	95	61.377	ENSSLDG00000022841	srsf6a	94	76.149	Seriola_lalandi_dorsalis
ENSGACG00000006084	srsf6a	53	84.865	ENSSPUG00000004967	SRSF6	98	61.940	Sphenodon_punctatus
ENSGACG00000006084	srsf6a	84	79.630	ENSSPAG00000002362	srsf6a	86	89.894	Stegastes_partitus
ENSGACG00000006084	srsf6a	53	83.871	ENSSSCG00000007362	SRSF6	98	58.912	Sus_scrofa
ENSGACG00000006084	srsf6a	53	83.784	ENSTGUG00000003455	SRSF6	96	61.408	Taeniopygia_guttata
ENSGACG00000006084	srsf6a	100	71.765	ENSTNIG00000001692	srsf6a	94	67.335	Tetraodon_nigroviridis
ENSGACG00000006084	srsf6a	61	76.744	ENSUAMG00000003559	SRSF6	98	61.940	Ursus_americanus
ENSGACG00000006084	srsf6a	95	72.958	ENSXMAG00000021849	srsf6a	93	72.599	Xiphophorus_maculatus