EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000006142 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3805 bases
Position: chrgroupXVIII:3323762-3327566
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000008138	PAP_RNA-bind	PF04926.15	5.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000008157	-	1434	-	ENSGACP00000008138	478 (aa)	-	G3NS21

Gene Model

Click here to download ENSGACG00000006142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000006142's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000006142	-	99	53.027	ENSGACG00000002718	papolg	64	53.027

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000006142	-	100	53.958	ENSG00000090060	PAPOLA	94	63.158	Homo_sapiens
ENSGACG00000006142	-	100	53.958	ENSAMEG00000014142	PAPOLA	65	54.375	Ailuropoda_melanoleuca
ENSGACG00000006142	-	100	54.470	ENSAPLG00000006645	PAPOLA	65	54.886	Anas_platyrhynchos
ENSGACG00000006142	-	100	54.167	ENSACAG00000013474	PAPOLA	73	54.583	Anolis_carolinensis
ENSGACG00000006142	-	100	54.167	ENSANAG00000018274	PAPOLA	88	54.583	Aotus_nancymaae
ENSGACG00000006142	-	100	50.939	ENSANAG00000027941	-	88	51.357	Aotus_nancymaae
ENSGACG00000006142	-	100	55.208	ENSAMXG00000018141	papola	86	55.208	Astyanax_mexicanus
ENSGACG00000006142	-	100	53.542	ENSBTAG00000004054	PAPOLA	69	53.958	Bos_taurus
ENSGACG00000006142	-	100	54.167	ENSCJAG00000006512	PAPOLA	88	54.583	Callithrix_jacchus
ENSGACG00000006142	-	100	53.958	ENSCAFG00000017783	PAPOLA	64	54.375	Canis_familiaris
ENSGACG00000006142	-	100	53.958	ENSCAFG00020011550	PAPOLA	86	54.375	Canis_lupus_dingo
ENSGACG00000006142	-	100	53.542	ENSCHIG00000025004	-	76	53.958	Capra_hircus
ENSGACG00000006142	-	100	53.958	ENSTSYG00000012384	PAPOLA	69	54.375	Carlito_syrichta
ENSGACG00000006142	-	100	50.000	ENSCPOG00000002648	PAPOLA	68	50.625	Cavia_porcellus
ENSGACG00000006142	-	100	54.167	ENSCCAG00000025120	PAPOLA	87	54.583	Cebus_capucinus
ENSGACG00000006142	-	100	54.167	ENSCATG00000018815	PAPOLA	89	54.583	Cercocebus_atys
ENSGACG00000006142	-	100	53.958	ENSCLAG00000016342	PAPOLA	69	54.375	Chinchilla_lanigera
ENSGACG00000006142	-	100	54.167	ENSCSAG00000010516	PAPOLA	64	54.583	Chlorocebus_sabaeus
ENSGACG00000006142	-	100	54.375	ENSCPBG00000024125	PAPOLA	65	54.792	Chrysemys_picta_bellii
ENSGACG00000006142	-	100	50.313	ENSCANG00000000159	PAPOLA	65	50.313	Colobus_angolensis_palliatus
ENSGACG00000006142	-	100	49.583	ENSCGRG00001000229	-	76	50.000	Cricetulus_griseus_chok1gshd
ENSGACG00000006142	-	100	53.750	ENSCGRG00001022693	-	69	54.167	Cricetulus_griseus_chok1gshd
ENSGACG00000006142	-	99	45.781	ENSCGRG00001002732	-	73	46.203	Cricetulus_griseus_chok1gshd
ENSGACG00000006142	-	100	53.750	ENSCGRG00000003664	-	70	54.167	Cricetulus_griseus_crigri
ENSGACG00000006142	-	100	48.017	ENSCGRG00000000257	-	66	48.017	Cricetulus_griseus_crigri
ENSGACG00000006142	-	100	45.756	ENSCGRG00000001888	-	64	46.170	Cricetulus_griseus_crigri
ENSGACG00000006142	-	100	54.489	ENSCSEG00000001841	-	71	54.489	Cynoglossus_semilaevis
ENSGACG00000006142	-	99	55.115	ENSDARG00000009585	papola	66	55.115	Danio_rerio
ENSGACG00000006142	-	52	52.209	ENSDORG00000013415	-	53	52.209	Dipodomys_ordii
ENSGACG00000006142	-	100	45.208	ENSETEG00000004889	PAPOLA	65	45.625	Echinops_telfairi
ENSGACG00000006142	-	100	54.678	ENSELUG00000018972	papola	65	54.678	Esox_lucius
ENSGACG00000006142	-	100	53.958	ENSFCAG00000006784	PAPOLA	69	54.375	Felis_catus
ENSGACG00000006142	-	100	54.583	ENSFALG00000002547	PAPOLA	62	55.000	Ficedula_albicollis
ENSGACG00000006142	-	100	53.958	ENSFDAG00000010370	PAPOLA	70	54.375	Fukomys_damarensis
ENSGACG00000006142	-	62	58.528	ENSGMOG00000010209	papola	58	58.528	Gadus_morhua
ENSGACG00000006142	-	100	54.583	ENSGALG00000033099	PAPOLA	65	55.000	Gallus_gallus
ENSGACG00000006142	-	100	54.375	ENSGAGG00000020500	PAPOLA	72	54.792	Gopherus_agassizii
ENSGACG00000006142	-	100	53.958	ENSGGOG00000006287	PAPOLA	87	50.830	Gorilla_gorilla
ENSGACG00000006142	-	96	49.028	ENSHGLG00000017457	-	74	49.020	Heterocephalus_glaber_female
ENSGACG00000006142	-	99	45.032	ENSHGLG00000007467	-	66	45.032	Heterocephalus_glaber_female
ENSGACG00000006142	-	100	53.958	ENSHGLG00000007909	-	69	54.375	Heterocephalus_glaber_female
ENSGACG00000006142	-	100	53.862	ENSHGLG00100017273	PAPOLA	69	54.280	Heterocephalus_glaber_male
ENSGACG00000006142	-	100	53.542	ENSIPUG00000005919	papola	65	53.306	Ictalurus_punctatus
ENSGACG00000006142	-	100	54.167	ENSSTOG00000011471	PAPOLA	69	54.583	Ictidomys_tridecemlineatus
ENSGACG00000006142	-	100	54.167	ENSJJAG00000024340	Papola	70	54.583	Jaculus_jaculus
ENSGACG00000006142	-	100	50.622	ENSLACG00000018136	PAPOLA	65	51.037	Latimeria_chalumnae
ENSGACG00000006142	-	100	47.423	ENSLOCG00000008632	papola	67	47.844	Lepisosteus_oculatus
ENSGACG00000006142	-	100	53.958	ENSLAFG00000000946	PAPOLA	65	54.375	Loxodonta_africana
ENSGACG00000006142	-	100	54.167	ENSMFAG00000001792	PAPOLA	88	54.583	Macaca_fascicularis
ENSGACG00000006142	-	100	54.167	ENSMMUG00000018610	PAPOLA	69	54.583	Macaca_mulatta
ENSGACG00000006142	-	100	54.167	ENSMNEG00000043747	PAPOLA	88	54.583	Macaca_nemestrina
ENSGACG00000006142	-	100	54.167	ENSMLEG00000032066	PAPOLA	70	53.333	Mandrillus_leucophaeus
ENSGACG00000006142	-	79	55.526	ENSMGAG00000013228	-	61	56.053	Meleagris_gallopavo
ENSGACG00000006142	-	100	53.958	ENSMAUG00000017178	Papola	69	54.375	Mesocricetus_auratus
ENSGACG00000006142	-	100	54.167	ENSMICG00000010347	PAPOLA	87	54.583	Microcebus_murinus
ENSGACG00000006142	-	100	53.750	ENSMOCG00000021670	Papola	69	54.167	Microtus_ochrogaster
ENSGACG00000006142	-	99	48.632	ENSMODG00000001969	-	65	49.053	Monodelphis_domestica
ENSGACG00000006142	-	100	54.167	ENSMODG00000012887	-	65	54.583	Monodelphis_domestica
ENSGACG00000006142	-	100	53.542	MGP_CAROLIEiJ_G0018093	Papola	69	53.958	Mus_caroli
ENSGACG00000006142	-	100	53.542	ENSMUSG00000021111	Papola	69	53.958	Mus_musculus
ENSGACG00000006142	-	100	53.542	MGP_PahariEiJ_G0029850	Papola	69	53.958	Mus_pahari
ENSGACG00000006142	-	100	53.542	MGP_SPRETEiJ_G0018943	Papola	69	53.958	Mus_spretus
ENSGACG00000006142	-	100	53.750	ENSMPUG00000003054	PAPOLA	65	54.167	Mustela_putorius_furo
ENSGACG00000006142	-	100	53.750	ENSMLUG00000010922	PAPOLA	65	54.167	Myotis_lucifugus
ENSGACG00000006142	-	100	53.958	ENSNGAG00000022172	Papola	69	54.375	Nannospalax_galili
ENSGACG00000006142	-	100	51.329	ENSNLEG00000000625	PAPOLA	71	51.738	Nomascus_leucogenys
ENSGACG00000006142	-	100	51.458	ENSOPRG00000007625	PAPOLA	66	51.875	Ochotona_princeps
ENSGACG00000006142	-	99	58.985	ENSONIG00000001062	-	96	58.985	Oreochromis_niloticus
ENSGACG00000006142	-	100	54.375	ENSOANG00000013812	PAPOLA	69	54.792	Ornithorhynchus_anatinus
ENSGACG00000006142	-	100	53.958	ENSOCUG00000011531	PAPOLA	65	54.375	Oryctolagus_cuniculus
ENSGACG00000006142	-	100	54.167	ENSOGAG00000004611	PAPOLA	65	54.583	Otolemur_garnettii
ENSGACG00000006142	-	100	53.542	ENSOARG00000016579	-	65	53.958	Ovis_aries
ENSGACG00000006142	-	100	53.958	ENSPPAG00000030505	PAPOLA	88	52.282	Pan_paniscus
ENSGACG00000006142	-	100	53.958	ENSPPRG00000008616	PAPOLA	67	54.375	Panthera_pardus
ENSGACG00000006142	-	100	53.958	ENSPTIG00000018852	PAPOLA	67	54.375	Panthera_tigris_altaica
ENSGACG00000006142	-	100	53.958	ENSPTRG00000006704	PAPOLA	69	52.282	Pan_troglodytes
ENSGACG00000006142	-	100	54.167	ENSPANG00000025582	PAPOLA	88	54.583	Papio_anubis
ENSGACG00000006142	-	100	55.625	ENSPKIG00000014471	papola	69	55.625	Paramormyrops_kingsleyae
ENSGACG00000006142	-	100	54.167	ENSPSIG00000014157	PAPOLA	56	54.583	Pelodiscus_sinensis
ENSGACG00000006142	-	100	53.750	ENSPEMG00000000043	Papola	69	54.167	Peromyscus_maniculatus_bairdii
ENSGACG00000006142	-	100	54.375	ENSPCIG00000013234	PAPOLA	70	54.792	Phascolarctos_cinereus
ENSGACG00000006142	-	100	52.708	ENSPPYG00000006128	PAPOLA	64	53.125	Pongo_abelii
ENSGACG00000006142	-	87	55.288	ENSPCAG00000004199	PAPOLA	63	55.769	Procavia_capensis
ENSGACG00000006142	-	100	51.458	ENSPCOG00000022117	PAPOLA	86	51.458	Propithecus_coquereli
ENSGACG00000006142	-	100	53.750	ENSPVAG00000013925	PAPOLA	65	54.167	Pteropus_vampyrus
ENSGACG00000006142	-	100	55.417	ENSPNAG00000010467	papola	68	55.417	Pygocentrus_nattereri
ENSGACG00000006142	-	100	53.542	ENSRNOG00000004827	Papola	65	53.958	Rattus_norvegicus
ENSGACG00000006142	-	100	54.167	ENSRBIG00000038490	PAPOLA	89	54.583	Rhinopithecus_bieti
ENSGACG00000006142	-	100	54.167	ENSRROG00000025545	PAPOLA	66	54.583	Rhinopithecus_roxellana
ENSGACG00000006142	-	100	54.167	ENSSBOG00000024061	PAPOLA	88	54.583	Saimiri_boliviensis_boliviensis
ENSGACG00000006142	-	100	54.375	ENSSHAG00000015211	PAPOLA	65	54.792	Sarcophilus_harrisii
ENSGACG00000006142	-	100	54.583	ENSSFOG00015004431	papola	87	54.583	Scleropages_formosus
ENSGACG00000006142	-	100	60.707	ENSSDUG00000018247	-	71	60.915	Seriola_dumerili
ENSGACG00000006142	-	100	53.750	ENSSPUG00000005835	PAPOLA	65	54.167	Sphenodon_punctatus
ENSGACG00000006142	-	100	53.958	ENSSSCG00000002505	-	69	54.375	Sus_scrofa
ENSGACG00000006142	-	100	54.583	ENSTGUG00000012687	PAPOLA	65	55.000	Taeniopygia_guttata
ENSGACG00000006142	-	100	46.667	ENSTTRG00000005717	PAPOLA	65	47.083	Tursiops_truncatus
ENSGACG00000006142	-	84	57.606	ENSUAMG00000025737	PAPOLA	93	58.105	Ursus_americanus
ENSGACG00000006142	-	100	54.167	ENSVPAG00000006464	PAPOLA	65	54.583	Vicugna_pacos
ENSGACG00000006142	-	100	53.958	ENSVVUG00000028340	PAPOLA	69	54.375	Vulpes_vulpes
ENSGACG00000006142	-	100	53.958	ENSXETG00000013949	papola	66	54.375	Xenopus_tropicalis