EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000006175 (Gene tree)
Gene ID: -
Gene Symbol: zmat3
Alias: zmp:0000000878
Full Name: zinc finger%2C matrin-type 3
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3254 bases
Position: chrgroupVIII:6384998-6388251
Accession: ZDB-GENE-130530-881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000008165	zf-met	PF12874.7	6.9e-23	1	3
ENSGACP00000008165	zf-met	PF12874.7	6.9e-23	2	3
ENSGACP00000008165	zf-met	PF12874.7	6.9e-23	3	3
ENSGACP00000008165	zf-C2H2_jaz	PF12171.8	1.9e-20	1	3
ENSGACP00000008165	zf-C2H2_jaz	PF12171.8	1.9e-20	2	3
ENSGACP00000008165	zf-C2H2_jaz	PF12171.8	1.9e-20	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000008184	-	786	-	ENSGACP00000008165	261 (aa)	-	G3NS48

Gene Model

Click here to download ENSGACG00000006175's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000006175's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000006175	zmat3	86	36.154	ENSGACG00000005515	zmat4a	89	33.898

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000006175	zmat3	92	64.919	ENSG00000172667	ZMAT3	85	64.919	Homo_sapiens
ENSGACG00000006175	zmat3	98	86.742	ENSAPOG00000015037	zmat3	94	82.642	Acanthochromis_polyacanthus
ENSGACG00000006175	zmat3	89	66.524	ENSAMEG00000010742	ZMAT3	80	66.524	Ailuropoda_melanoleuca
ENSGACG00000006175	zmat3	100	82.759	ENSACIG00000023037	zmat3	86	82.759	Amphilophus_citrinellus
ENSGACG00000006175	zmat3	98	86.364	ENSAOCG00000017955	zmat3	88	84.291	Amphiprion_ocellaris
ENSGACG00000006175	zmat3	100	85.057	ENSAPEG00000014553	zmat3	92	85.057	Amphiprion_percula
ENSGACG00000006175	zmat3	100	84.291	ENSATEG00000022244	zmat3	94	84.291	Anabas_testudineus
ENSGACG00000006175	zmat3	89	67.241	ENSAPLG00000013292	ZMAT3	80	67.241	Anas_platyrhynchos
ENSGACG00000006175	zmat3	94	63.386	ENSACAG00000005005	ZMAT3	93	60.219	Anolis_carolinensis
ENSGACG00000006175	zmat3	90	61.983	ENSANAG00000035673	ZMAT3	85	62.397	Aotus_nancymaae
ENSGACG00000006175	zmat3	98	86.364	ENSACLG00000026272	zmat3	90	85.057	Astatotilapia_calliptera
ENSGACG00000006175	zmat3	98	67.293	ENSAMXG00000009798	zmat3	72	67.293	Astyanax_mexicanus
ENSGACG00000006175	zmat3	89	66.953	ENSBTAG00000012463	ZMAT3	80	66.953	Bos_taurus
ENSGACG00000006175	zmat3	92	64.257	ENSCJAG00000013399	ZMAT3	85	64.659	Callithrix_jacchus
ENSGACG00000006175	zmat3	89	66.524	ENSCAFG00000011081	ZMAT3	80	66.524	Canis_familiaris
ENSGACG00000006175	zmat3	89	66.524	ENSCAFG00020023107	ZMAT3	80	66.524	Canis_lupus_dingo
ENSGACG00000006175	zmat3	89	66.379	ENSCHIG00000025074	ZMAT3	80	66.379	Capra_hircus
ENSGACG00000006175	zmat3	89	66.810	ENSTSYG00000026546	ZMAT3	80	66.810	Carlito_syrichta
ENSGACG00000006175	zmat3	89	65.948	ENSCAPG00000014645	ZMAT3	80	65.948	Cavia_aperea
ENSGACG00000006175	zmat3	89	65.948	ENSCPOG00000003865	ZMAT3	80	65.948	Cavia_porcellus
ENSGACG00000006175	zmat3	92	64.113	ENSCCAG00000036721	ZMAT3	85	64.113	Cebus_capucinus
ENSGACG00000006175	zmat3	99	57.692	ENSCATG00000025137	ZMAT3	87	57.692	Cercocebus_atys
ENSGACG00000006175	zmat3	89	66.810	ENSCLAG00000013464	ZMAT3	80	66.810	Chinchilla_lanigera
ENSGACG00000006175	zmat3	90	65.678	ENSCSAG00000012935	ZMAT3	81	65.678	Chlorocebus_sabaeus
ENSGACG00000006175	zmat3	89	68.103	ENSCHOG00000005591	ZMAT3	80	68.103	Choloepus_hoffmanni
ENSGACG00000006175	zmat3	91	65.272	ENSCPBG00000026917	ZMAT3	83	65.272	Chrysemys_picta_bellii
ENSGACG00000006175	zmat3	92	64.463	ENSCANG00000029476	ZMAT3	81	65.401	Colobus_angolensis_palliatus
ENSGACG00000006175	zmat3	90	65.254	ENSCGRG00001012339	Zmat3	81	65.254	Cricetulus_griseus_chok1gshd
ENSGACG00000006175	zmat3	90	65.254	ENSCGRG00000011491	Zmat3	81	65.254	Cricetulus_griseus_crigri
ENSGACG00000006175	zmat3	95	82.422	ENSCSEG00000019463	zmat3	78	80.591	Cynoglossus_semilaevis
ENSGACG00000006175	zmat3	98	82.890	ENSCVAG00000011847	zmat3	89	79.468	Cyprinodon_variegatus
ENSGACG00000006175	zmat3	89	71.784	ENSDARG00000080021	zmat3	81	69.261	Danio_rerio
ENSGACG00000006175	zmat3	89	66.524	ENSDNOG00000012284	ZMAT3	80	66.524	Dasypus_novemcinctus
ENSGACG00000006175	zmat3	89	66.379	ENSDORG00000011801	Zmat3	80	66.379	Dipodomys_ordii
ENSGACG00000006175	zmat3	67	59.551	ENSETEG00000008883	ZMAT3	75	59.551	Echinops_telfairi
ENSGACG00000006175	zmat3	89	66.810	ENSEASG00005016887	ZMAT3	80	66.810	Equus_asinus_asinus
ENSGACG00000006175	zmat3	89	66.810	ENSECAG00000012784	ZMAT3	80	66.810	Equus_caballus
ENSGACG00000006175	zmat3	89	59.052	ENSEEUG00000001126	ZMAT3	80	59.052	Erinaceus_europaeus
ENSGACG00000006175	zmat3	98	71.863	ENSELUG00000010132	zmat3	70	71.161	Esox_lucius
ENSGACG00000006175	zmat3	89	66.810	ENSFCAG00000014578	ZMAT3	80	66.810	Felis_catus
ENSGACG00000006175	zmat3	89	67.241	ENSFALG00000008403	ZMAT3	80	67.241	Ficedula_albicollis
ENSGACG00000006175	zmat3	89	66.953	ENSFDAG00000013376	ZMAT3	80	66.953	Fukomys_damarensis
ENSGACG00000006175	zmat3	99	83.012	ENSFHEG00000003221	zmat3	92	83.012	Fundulus_heteroclitus
ENSGACG00000006175	zmat3	93	77.366	ENSGMOG00000008558	zmat3	100	77.366	Gadus_morhua
ENSGACG00000006175	zmat3	99	62.069	ENSGALG00000040948	ZMAT3	99	62.069	Gallus_gallus
ENSGACG00000006175	zmat3	61	83.019	ENSGAFG00000010485	zmat3	55	83.019	Gambusia_affinis
ENSGACG00000006175	zmat3	91	62.500	ENSGAGG00000009275	ZMAT3	83	62.500	Gopherus_agassizii
ENSGACG00000006175	zmat3	92	64.919	ENSGGOG00000009975	ZMAT3	85	64.919	Gorilla_gorilla
ENSGACG00000006175	zmat3	98	86.364	ENSHBUG00000004401	zmat3	89	84.825	Haplochromis_burtoni
ENSGACG00000006175	zmat3	89	66.810	ENSHGLG00000011523	ZMAT3	80	66.810	Heterocephalus_glaber_female
ENSGACG00000006175	zmat3	89	66.810	ENSHGLG00100012235	ZMAT3	80	66.810	Heterocephalus_glaber_male
ENSGACG00000006175	zmat3	100	75.573	ENSHCOG00000010624	zmat3	78	75.573	Hippocampus_comes
ENSGACG00000006175	zmat3	98	63.273	ENSIPUG00000003043	zmat3	84	68.670	Ictalurus_punctatus
ENSGACG00000006175	zmat3	89	66.810	ENSSTOG00000028436	ZMAT3	80	66.810	Ictidomys_tridecemlineatus
ENSGACG00000006175	zmat3	95	64.062	ENSJJAG00000004288	Zmat3	87	64.062	Jaculus_jaculus
ENSGACG00000006175	zmat3	98	84.411	ENSKMAG00000008962	zmat3	93	81.673	Kryptolebias_marmoratus
ENSGACG00000006175	zmat3	100	81.887	ENSLBEG00000001993	zmat3	94	81.887	Labrus_bergylta
ENSGACG00000006175	zmat3	99	56.877	ENSLACG00000015780	ZMAT3	67	60.484	Latimeria_chalumnae
ENSGACG00000006175	zmat3	94	68.504	ENSLOCG00000001108	zmat3	68	68.504	Lepisosteus_oculatus
ENSGACG00000006175	zmat3	89	67.949	ENSLAFG00000000897	ZMAT3	80	67.949	Loxodonta_africana
ENSGACG00000006175	zmat3	90	65.678	ENSMFAG00000021292	ZMAT3	81	65.678	Macaca_fascicularis
ENSGACG00000006175	zmat3	90	65.401	ENSMMUG00000003216	ZMAT3	81	65.401	Macaca_mulatta
ENSGACG00000006175	zmat3	90	65.401	ENSMNEG00000036725	ZMAT3	81	65.401	Macaca_nemestrina
ENSGACG00000006175	zmat3	90	65.678	ENSMLEG00000026279	ZMAT3	81	65.678	Mandrillus_leucophaeus
ENSGACG00000006175	zmat3	100	85.448	ENSMAMG00000012349	zmat3	84	85.441	Mastacembelus_armatus
ENSGACG00000006175	zmat3	98	86.364	ENSMZEG00005015427	zmat3	82	87.755	Maylandia_zebra
ENSGACG00000006175	zmat3	89	66.810	ENSMGAG00000009873	ZMAT3	80	66.810	Meleagris_gallopavo
ENSGACG00000006175	zmat3	89	65.948	ENSMAUG00000001986	Zmat3	80	65.948	Mesocricetus_auratus
ENSGACG00000006175	zmat3	89	66.379	ENSMICG00000049501	ZMAT3	80	66.379	Microcebus_murinus
ENSGACG00000006175	zmat3	89	66.810	ENSMOCG00000018844	Zmat3	80	66.810	Microtus_ochrogaster
ENSGACG00000006175	zmat3	100	85.824	ENSMMOG00000001603	zmat3	81	85.824	Mola_mola
ENSGACG00000006175	zmat3	91	60.484	ENSMODG00000021308	ZMAT3	83	60.484	Monodelphis_domestica
ENSGACG00000006175	zmat3	99	84.496	ENSMALG00000019683	zmat3	89	84.496	Monopterus_albus
ENSGACG00000006175	zmat3	89	66.094	MGP_CAROLIEiJ_G0024914	Zmat3	80	66.094	Mus_caroli
ENSGACG00000006175	zmat3	89	66.094	ENSMUSG00000027663	Zmat3	80	66.094	Mus_musculus
ENSGACG00000006175	zmat3	89	64.957	MGP_PahariEiJ_G0026359	Zmat3	80	64.957	Mus_pahari
ENSGACG00000006175	zmat3	89	66.094	MGP_SPRETEiJ_G0025848	Zmat3	80	66.094	Mus_spretus
ENSGACG00000006175	zmat3	89	66.810	ENSMPUG00000017206	ZMAT3	80	66.810	Mustela_putorius_furo
ENSGACG00000006175	zmat3	89	65.532	ENSMLUG00000013074	ZMAT3	80	65.532	Myotis_lucifugus
ENSGACG00000006175	zmat3	99	62.452	ENSNGAG00000023602	Zmat3	88	62.452	Nannospalax_galili
ENSGACG00000006175	zmat3	98	84.825	ENSNBRG00000020886	zmat3	89	84.825	Neolamprologus_brichardi
ENSGACG00000006175	zmat3	92	64.659	ENSNLEG00000005658	ZMAT3	85	64.659	Nomascus_leucogenys
ENSGACG00000006175	zmat3	89	63.948	ENSMEUG00000015724	ZMAT3	79	63.948	Notamacropus_eugenii
ENSGACG00000006175	zmat3	97	62.992	ENSODEG00000003313	ZMAT3	80	66.379	Octodon_degus
ENSGACG00000006175	zmat3	99	85.714	ENSONIG00000008388	zmat3	89	85.714	Oreochromis_niloticus
ENSGACG00000006175	zmat3	62	61.310	ENSOANG00000009901	ZMAT3	63	61.310	Ornithorhynchus_anatinus
ENSGACG00000006175	zmat3	89	67.241	ENSOCUG00000004658	ZMAT3	85	64.516	Oryctolagus_cuniculus
ENSGACG00000006175	zmat3	95	82.745	ENSORLG00000011575	zmat3	56	78.623	Oryzias_latipes
ENSGACG00000006175	zmat3	95	82.353	ENSORLG00020005858	zmat3	56	78.261	Oryzias_latipes_hni
ENSGACG00000006175	zmat3	95	83.137	ENSORLG00015003707	zmat3	56	78.986	Oryzias_latipes_hsok
ENSGACG00000006175	zmat3	95	81.961	ENSOMEG00000011303	zmat3	77	82.988	Oryzias_melastigma
ENSGACG00000006175	zmat3	89	65.665	ENSOGAG00000003252	ZMAT3	80	65.665	Otolemur_garnettii
ENSGACG00000006175	zmat3	89	66.094	ENSOARG00000020713	ZMAT3	80	66.094	Ovis_aries
ENSGACG00000006175	zmat3	92	64.919	ENSPPAG00000035483	ZMAT3	85	64.919	Pan_paniscus
ENSGACG00000006175	zmat3	89	66.953	ENSPPRG00000004407	ZMAT3	80	66.953	Panthera_pardus
ENSGACG00000006175	zmat3	89	66.953	ENSPTIG00000009929	ZMAT3	80	66.953	Panthera_tigris_altaica
ENSGACG00000006175	zmat3	92	64.659	ENSPTRG00000015641	ZMAT3	85	64.659	Pan_troglodytes
ENSGACG00000006175	zmat3	99	62.452	ENSPANG00000023167	ZMAT3	89	62.452	Papio_anubis
ENSGACG00000006175	zmat3	93	68.548	ENSPKIG00000023370	zmat3	70	67.717	Paramormyrops_kingsleyae
ENSGACG00000006175	zmat3	95	62.400	ENSPSIG00000014839	ZMAT3	84	62.400	Pelodiscus_sinensis
ENSGACG00000006175	zmat3	94	75.610	ENSPMGG00000023924	zmat3	90	75.610	Periophthalmus_magnuspinnatus
ENSGACG00000006175	zmat3	89	65.086	ENSPEMG00000019154	Zmat3	80	65.086	Peromyscus_maniculatus_bairdii
ENSGACG00000006175	zmat3	98	84.030	ENSPFOG00000019206	zmat3	69	83.650	Poecilia_formosa
ENSGACG00000006175	zmat3	94	85.714	ENSPLAG00000022572	zmat3	85	85.714	Poecilia_latipinna
ENSGACG00000006175	zmat3	95	74.699	ENSPMEG00000004131	-	89	72.973	Poecilia_mexicana
ENSGACG00000006175	zmat3	100	81.992	ENSPREG00000022632	zmat3	94	81.992	Poecilia_reticulata
ENSGACG00000006175	zmat3	92	64.659	ENSPPYG00000014315	ZMAT3	85	64.659	Pongo_abelii
ENSGACG00000006175	zmat3	89	66.667	ENSPCAG00000008585	ZMAT3	81	66.667	Procavia_capensis
ENSGACG00000006175	zmat3	89	66.379	ENSPCOG00000022835	ZMAT3	80	66.379	Propithecus_coquereli
ENSGACG00000006175	zmat3	91	66.527	ENSPVAG00000004489	ZMAT3	81	66.527	Pteropus_vampyrus
ENSGACG00000006175	zmat3	98	84.825	ENSPNYG00000014350	zmat3	89	84.825	Pundamilia_nyererei
ENSGACG00000006175	zmat3	98	66.917	ENSPNAG00000015664	zmat3	72	66.917	Pygocentrus_nattereri
ENSGACG00000006175	zmat3	89	65.948	ENSRNOG00000010119	Zmat3	80	65.948	Rattus_norvegicus
ENSGACG00000006175	zmat3	92	65.145	ENSRBIG00000029622	ZMAT3	81	66.102	Rhinopithecus_bieti
ENSGACG00000006175	zmat3	92	64.876	ENSRROG00000038345	ZMAT3	81	65.823	Rhinopithecus_roxellana
ENSGACG00000006175	zmat3	92	64.919	ENSSBOG00000033332	ZMAT3	85	65.323	Saimiri_boliviensis_boliviensis
ENSGACG00000006175	zmat3	92	63.374	ENSSHAG00000016154	ZMAT3	82	63.374	Sarcophilus_harrisii
ENSGACG00000006175	zmat3	93	70.968	ENSSFOG00015006984	zmat3	84	70.000	Scleropages_formosus
ENSGACG00000006175	zmat3	98	84.091	ENSSMAG00000019540	-	58	84.091	Scophthalmus_maximus
ENSGACG00000006175	zmat3	100	84.470	ENSSDUG00000016188	zmat3	80	84.470	Seriola_dumerili
ENSGACG00000006175	zmat3	100	86.567	ENSSLDG00000018611	zmat3	80	84.470	Seriola_lalandi_dorsalis
ENSGACG00000006175	zmat3	60	63.057	ENSSARG00000004901	ZMAT3	70	63.462	Sorex_araneus
ENSGACG00000006175	zmat3	89	65.948	ENSSPUG00000014753	ZMAT3	81	65.948	Sphenodon_punctatus
ENSGACG00000006175	zmat3	98	86.381	ENSSPAG00000011062	zmat3	79	86.381	Stegastes_partitus
ENSGACG00000006175	zmat3	89	67.241	ENSSSCG00000033860	ZMAT3	80	67.241	Sus_scrofa
ENSGACG00000006175	zmat3	89	67.241	ENSTGUG00000010765	-	80	67.241	Taeniopygia_guttata
ENSGACG00000006175	zmat3	91	86.920	ENSTRUG00000004788	zmat3	96	79.412	Takifugu_rubripes
ENSGACG00000006175	zmat3	100	83.712	ENSTNIG00000006781	zmat3	93	83.712	Tetraodon_nigroviridis
ENSGACG00000006175	zmat3	74	71.154	ENSTBEG00000012359	ZMAT3	97	71.154	Tupaia_belangeri
ENSGACG00000006175	zmat3	89	63.090	ENSTTRG00000004923	ZMAT3	80	63.090	Tursiops_truncatus
ENSGACG00000006175	zmat3	89	65.665	ENSUAMG00000007623	ZMAT3	80	65.665	Ursus_americanus
ENSGACG00000006175	zmat3	89	65.948	ENSUMAG00000007847	ZMAT3	80	65.948	Ursus_maritimus
ENSGACG00000006175	zmat3	89	65.665	ENSVPAG00000006611	ZMAT3	80	65.665	Vicugna_pacos
ENSGACG00000006175	zmat3	89	66.524	ENSVVUG00000004729	ZMAT3	80	66.524	Vulpes_vulpes
ENSGACG00000006175	zmat3	99	55.805	ENSXETG00000007251	zmat3	90	55.805	Xenopus_tropicalis
ENSGACG00000006175	zmat3	98	84.047	ENSXCOG00000008397	zmat3	91	84.047	Xiphophorus_couchianus
ENSGACG00000006175	zmat3	98	83.650	ENSXMAG00000015188	zmat3	55	83.650	Xiphophorus_maculatus