EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000006283 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 1249 bases
Position: chrgroupXVI:11995507-11996755
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000008303	zf-C2H2	PF00096.26	1e-21	1	5
ENSGACP00000008303	zf-C2H2	PF00096.26	1e-21	2	5
ENSGACP00000008303	zf-C2H2	PF00096.26	1e-21	3	5
ENSGACP00000008303	zf-C2H2	PF00096.26	1e-21	4	5
ENSGACP00000008303	zf-C2H2	PF00096.26	1e-21	5	5
ENSGACP00000008303	zf-met	PF12874.7	7.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000008322	-	940	-	ENSGACP00000008303	250 (aa)	-	G3NSI5

Gene Model

Click here to download ENSGACG00000006283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000006283's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000006283	-	95	40.201	ENSGACG00000012415	GZF1	100	39.161
ENSGACG00000006283	-	78	43.363	ENSGACG00000005239	-	85	43.363
ENSGACG00000006283	-	75	41.429	ENSGACG00000015729	-	97	40.351
ENSGACG00000006283	-	72	40.698	ENSGACG00000001166	-	100	40.698
ENSGACG00000006283	-	61	35.593	ENSGACG00000001618	-	55	32.192
ENSGACG00000006283	-	73	45.205	ENSGACG00000010384	-	99	45.714
ENSGACG00000006283	-	80	44.853	ENSGACG00000010352	si:ch211-207i20.2	62	46.099
ENSGACG00000006283	-	90	39.437	ENSGACG00000009449	znf526	54	39.437
ENSGACG00000006283	-	89	39.894	ENSGACG00000015674	gfi1aa	51	44.853
ENSGACG00000006283	-	96	50.000	ENSGACG00000001358	-	100	50.000
ENSGACG00000006283	-	71	31.111	ENSGACG00000014840	maza	66	34.821
ENSGACG00000006283	-	88	46.154	ENSGACG00000018415	-	100	46.154
ENSGACG00000006283	-	96	37.791	ENSGACG00000011187	zbtb48	57	43.478
ENSGACG00000006283	-	74	38.824	ENSGACG00000008982	scrt1b	52	38.824
ENSGACG00000006283	-	72	44.792	ENSGACG00000005742	-	53	44.792
ENSGACG00000006283	-	96	44.218	ENSGACG00000012611	-	82	45.255
ENSGACG00000006283	-	92	36.957	ENSGACG00000003258	znf319b	85	37.419
ENSGACG00000006283	-	96	48.673	ENSGACG00000004478	-	100	45.652
ENSGACG00000006283	-	99	43.810	ENSGACG00000018816	-	99	43.810
ENSGACG00000006283	-	96	45.113	ENSGACG00000014395	-	99	45.113
ENSGACG00000006283	-	96	50.000	ENSGACG00000013652	-	97	50.000
ENSGACG00000006283	-	88	44.853	ENSGACG00000013659	-	93	44.853
ENSGACG00000006283	-	95	38.168	ENSGACG00000001371	-	99	38.168
ENSGACG00000006283	-	80	43.750	ENSGACG00000001377	-	95	44.715
ENSGACG00000006283	-	80	38.938	ENSGACG00000008733	znf646	70	38.938
ENSGACG00000006283	-	90	45.070	ENSGACG00000001523	-	99	45.070
ENSGACG00000006283	-	74	48.120	ENSGACG00000013660	-	99	48.120
ENSGACG00000006283	-	95	38.674	ENSGACG00000005553	znf236	98	42.276
ENSGACG00000006283	-	97	41.549	ENSGACG00000019863	-	97	41.549
ENSGACG00000006283	-	98	48.624	ENSGACG00000004761	-	100	48.624
ENSGACG00000006283	-	76	49.138	ENSGACG00000004765	-	99	49.138
ENSGACG00000006283	-	89	39.716	ENSGACG00000003372	zbtb47b	57	40.602
ENSGACG00000006283	-	96	45.536	ENSGACG00000019550	-	92	47.748
ENSGACG00000006283	-	95	34.419	ENSGACG00000016248	-	100	34.419
ENSGACG00000006283	-	73	36.957	ENSGACG00000017935	snai2	52	36.957
ENSGACG00000006283	-	75	46.218	ENSGACG00000010051	-	80	46.218
ENSGACG00000006283	-	96	45.865	ENSGACG00000010393	-	100	45.865
ENSGACG00000006283	-	82	46.400	ENSGACG00000018088	si:dkey-7i4.5	99	46.400
ENSGACG00000006283	-	79	45.122	ENSGACG00000010515	ZNF628	99	45.122
ENSGACG00000006283	-	95	48.872	ENSGACG00000012517	-	100	48.872
ENSGACG00000006283	-	96	48.246	ENSGACG00000004549	-	99	48.246

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000006283	-	77	46.970	ENSACAG00000024956	-	76	46.970	Anolis_carolinensis
ENSGACG00000006283	-	95	46.617	ENSACAG00000008664	-	57	47.368	Anolis_carolinensis
ENSGACG00000006283	-	94	39.850	ENSACAG00000024898	-	98	45.455	Anolis_carolinensis
ENSGACG00000006283	-	96	42.045	ENSAMXG00000010805	-	97	42.045	Astyanax_mexicanus
ENSGACG00000006283	-	72	55.497	ENSAMXG00000035246	-	53	56.906	Astyanax_mexicanus
ENSGACG00000006283	-	95	37.766	ENSAMXG00000038636	-	97	38.710	Astyanax_mexicanus
ENSGACG00000006283	-	96	37.563	ENSAMXG00000042746	-	84	44.697	Astyanax_mexicanus
ENSGACG00000006283	-	96	38.172	ENSAMXG00000025452	-	95	45.865	Astyanax_mexicanus
ENSGACG00000006283	-	95	39.086	ENSAMXG00000036233	-	92	45.865	Astyanax_mexicanus
ENSGACG00000006283	-	95	35.678	ENSAMXG00000032841	-	72	39.850	Astyanax_mexicanus
ENSGACG00000006283	-	95	35.326	ENSAMXG00000034847	-	85	37.097	Astyanax_mexicanus
ENSGACG00000006283	-	96	43.827	ENSAMXG00000034344	-	87	44.444	Astyanax_mexicanus
ENSGACG00000006283	-	78	44.604	ENSAMXG00000038325	-	89	42.657	Astyanax_mexicanus
ENSGACG00000006283	-	99	45.390	ENSAMXG00000042784	-	93	43.750	Astyanax_mexicanus
ENSGACG00000006283	-	96	37.563	ENSAMXG00000038536	-	84	44.697	Astyanax_mexicanus
ENSGACG00000006283	-	71	46.043	ENSBTAG00000038322	-	76	46.043	Bos_taurus
ENSGACG00000006283	-	98	48.837	ENSCPBG00000001526	-	83	48.450	Chrysemys_picta_bellii
ENSGACG00000006283	-	78	43.333	ENSCPBG00000026433	-	52	47.368	Chrysemys_picta_bellii
ENSGACG00000006283	-	70	45.113	ENSCPBG00000008580	-	74	45.113	Chrysemys_picta_bellii
ENSGACG00000006283	-	94	38.182	ENSCSAVG00000010960	-	100	40.708	Ciona_savignyi
ENSGACG00000006283	-	71	45.000	ENSDNOG00000047495	-	78	45.000	Dasypus_novemcinctus
ENSGACG00000006283	-	81	51.304	ENSEBUG00000008306	-	79	51.304	Eptatretus_burgeri
ENSGACG00000006283	-	97	48.913	ENSEBUG00000002075	-	75	49.624	Eptatretus_burgeri
ENSGACG00000006283	-	95	49.242	ENSEBUG00000012919	-	71	49.242	Eptatretus_burgeri
ENSGACG00000006283	-	95	50.769	ENSEBUG00000011694	-	95	55.752	Eptatretus_burgeri
ENSGACG00000006283	-	96	49.242	ENSEBUG00000011435	-	81	49.242	Eptatretus_burgeri
ENSGACG00000006283	-	92	39.091	ENSEBUG00000014717	-	75	43.443	Eptatretus_burgeri
ENSGACG00000006283	-	81	40.741	ENSEBUG00000015837	-	78	43.939	Eptatretus_burgeri
ENSGACG00000006283	-	97	52.033	ENSEBUG00000005264	-	73	52.033	Eptatretus_burgeri
ENSGACG00000006283	-	88	44.604	ENSEASG00005004469	-	70	44.604	Equus_asinus_asinus
ENSGACG00000006283	-	96	46.154	ENSGMOG00000018506	-	84	46.154	Gadus_morhua
ENSGACG00000006283	-	95	43.396	ENSGALG00000046336	-	97	48.624	Gallus_gallus
ENSGACG00000006283	-	95	47.761	ENSGALG00000044069	-	52	52.632	Gallus_gallus
ENSGACG00000006283	-	96	42.857	ENSGALG00000049609	-	54	49.624	Gallus_gallus
ENSGACG00000006283	-	96	48.598	ENSGALG00000053507	-	78	45.455	Gallus_gallus
ENSGACG00000006283	-	96	44.262	ENSGALG00000054325	-	97	49.138	Gallus_gallus
ENSGACG00000006283	-	85	47.321	ENSGALG00000055127	-	64	47.321	Gallus_gallus
ENSGACG00000006283	-	95	46.212	ENSGAGG00000011366	-	87	46.617	Gopherus_agassizii
ENSGACG00000006283	-	97	50.270	ENSGAGG00000011399	-	83	48.889	Gopherus_agassizii
ENSGACG00000006283	-	97	46.610	ENSGAGG00000018885	-	66	46.617	Gopherus_agassizii
ENSGACG00000006283	-	80	38.356	ENSHCOG00000018201	-	85	38.889	Hippocampus_comes
ENSGACG00000006283	-	95	51.220	ENSIPUG00000021515	-	88	45.614	Ictalurus_punctatus
ENSGACG00000006283	-	95	44.361	ENSIPUG00000015468	-	83	51.220	Ictalurus_punctatus
ENSGACG00000006283	-	68	43.846	ENSJJAG00000023633	Zfp672	92	44.697	Jaculus_jaculus
ENSGACG00000006283	-	87	46.429	ENSLACG00000022211	-	76	48.485	Latimeria_chalumnae
ENSGACG00000006283	-	74	40.769	ENSLACG00000005264	-	97	40.769	Latimeria_chalumnae
ENSGACG00000006283	-	95	36.170	ENSLACG00000009005	-	100	39.706	Latimeria_chalumnae
ENSGACG00000006283	-	97	39.796	ENSLOCG00000017864	-	97	40.741	Lepisosteus_oculatus
ENSGACG00000006283	-	95	39.752	ENSMGAG00000013362	-	99	46.212	Meleagris_gallopavo
ENSGACG00000006283	-	67	45.455	ENSMAUG00000009945	Zfp672	86	45.455	Mesocricetus_auratus
ENSGACG00000006283	-	92	76.064	ENSMMOG00000003923	-	91	76.064	Mola_mola
ENSGACG00000006283	-	99	48.855	ENSMODG00000001880	-	73	48.855	Monodelphis_domestica
ENSGACG00000006283	-	71	43.571	MGP_CAROLIEiJ_G0030502	-	60	47.573	Mus_caroli
ENSGACG00000006283	-	80	44.697	MGP_CAROLIEiJ_G0016391	Zfp672	91	44.697	Mus_caroli
ENSGACG00000006283	-	80	44.697	MGP_SPRETEiJ_G0017233	Zfp672	91	44.697	Mus_spretus
ENSGACG00000006283	-	78	43.571	MGP_SPRETEiJ_G0031613	-	84	43.571	Mus_spretus
ENSGACG00000006283	-	95	48.889	ENSNGAG00000015777	Zim1	59	48.889	Nannospalax_galili
ENSGACG00000006283	-	94	38.043	ENSNBRG00000000708	-	89	41.722	Neolamprologus_brichardi
ENSGACG00000006283	-	57	43.373	ENSNBRG00000007276	-	63	43.373	Neolamprologus_brichardi
ENSGACG00000006283	-	77	66.176	ENSORLG00020001922	-	91	66.359	Oryzias_latipes_hni
ENSGACG00000006283	-	63	85.075	ENSOMEG00000001598	-	63	86.179	Oryzias_melastigma
ENSGACG00000006283	-	57	51.136	ENSPSIG00000006790	-	91	48.421	Pelodiscus_sinensis
ENSGACG00000006283	-	95	48.905	ENSPSIG00000004502	-	52	48.905	Pelodiscus_sinensis
ENSGACG00000006283	-	88	44.361	ENSPSIG00000010328	-	58	44.361	Pelodiscus_sinensis
ENSGACG00000006283	-	95	49.091	ENSPSIG00000013021	-	75	49.091	Pelodiscus_sinensis
ENSGACG00000006283	-	99	49.533	ENSPSIG00000005603	-	65	50.000	Pelodiscus_sinensis
ENSGACG00000006283	-	94	59.358	ENSPSIG00000000672	-	89	59.358	Pelodiscus_sinensis
ENSGACG00000006283	-	96	43.609	ENSPSIG00000003152	-	78	43.243	Pelodiscus_sinensis
ENSGACG00000006283	-	95	46.610	ENSPSIG00000015459	-	70	46.610	Pelodiscus_sinensis
ENSGACG00000006283	-	100	46.617	ENSPSIG00000010248	-	65	48.120	Pelodiscus_sinensis
ENSGACG00000006283	-	96	34.025	ENSPSIG00000005672	-	57	41.429	Pelodiscus_sinensis
ENSGACG00000006283	-	93	45.455	ENSPSIG00000012650	-	75	45.455	Pelodiscus_sinensis
ENSGACG00000006283	-	96	42.953	ENSPSIG00000006586	-	99	47.664	Pelodiscus_sinensis
ENSGACG00000006283	-	95	46.617	ENSPSIG00000016380	-	68	45.045	Pelodiscus_sinensis
ENSGACG00000006283	-	76	44.118	ENSPREG00000002642	-	91	44.118	Poecilia_reticulata
ENSGACG00000006283	-	68	45.045	ENSPNYG00000015486	-	50	45.045	Pundamilia_nyererei
ENSGACG00000006283	-	96	39.394	ENSPNAG00000018395	-	58	45.113	Pygocentrus_nattereri
ENSGACG00000006283	-	85	38.764	ENSPNAG00000000088	-	89	42.012	Pygocentrus_nattereri
ENSGACG00000006283	-	80	45.455	ENSRNOG00000002713	Zfp672	91	45.455	Rattus_norvegicus
ENSGACG00000006283	-	95	47.015	ENSSHAG00000018106	-	74	47.015	Sarcophilus_harrisii
ENSGACG00000006283	-	98	39.560	ENSSFOG00015019818	-	73	47.059	Scleropages_formosus
ENSGACG00000006283	-	95	39.259	ENSSMAG00000004252	-	85	39.259	Scophthalmus_maximus
ENSGACG00000006283	-	95	48.872	ENSSPUG00000004366	-	58	51.376	Sphenodon_punctatus
ENSGACG00000006283	-	94	42.424	ENSSPUG00000010016	-	86	44.545	Sphenodon_punctatus
ENSGACG00000006283	-	71	92.727	ENSSPAG00000021653	-	79	92.727	Stegastes_partitus
ENSGACG00000006283	-	70	50.000	ENSTGUG00000018351	-	99	50.000	Taeniopygia_guttata
ENSGACG00000006283	-	99	48.120	ENSTGUG00000015210	-	99	46.970	Taeniopygia_guttata
ENSGACG00000006283	-	97	44.615	ENSTRUG00000022066	-	88	44.615	Takifugu_rubripes
ENSGACG00000006283	-	99	37.427	ENSXETG00000031192	-	94	43.056	Xenopus_tropicalis
ENSGACG00000006283	-	70	50.376	ENSXCOG00000006553	-	85	50.376	Xiphophorus_couchianus
ENSGACG00000006283	-	74	36.552	ENSXMAG00000026680	-	86	38.400	Xiphophorus_maculatus