EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000006300 (Gene tree)
Gene ID: -
Gene Symbol: dhx40
Alias: -
Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 40
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 5272 bases
Position: chrgroupI:3047218-3052489
Accession: ZDB-GENE-080507-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000008342	DEAD	PF00270.29	1.9e-06	1	1
ENSGACP00000008339	DEAD	PF00270.29	2e-06	1	1
ENSGACP00000008342	HA2	PF04408.23	3.1e-17	1	1
ENSGACP00000008339	HA2	PF04408.23	3.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000008361	-	2204	-	ENSGACP00000008342	724 (aa)	-	G3NSM4
ENSGACT00000008358	-	2193	-	ENSGACP00000008339	731 (aa)	-	G3NSM1

Gene Model

Click here to download ENSGACG00000006300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000006300's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000006300	dhx40	91	44.042	ENSGACG00000001768	dhx16	69	44.042
ENSGACG00000006300	dhx40	80	40.609	ENSGACG00000018569	YTHDC2	76	40.609
ENSGACG00000006300	dhx40	76	32.500	ENSGACG00000013085	dhx34	71	40.957
ENSGACG00000006300	dhx40	92	40.473	ENSGACG00000019549	dhx15	91	40.238
ENSGACG00000006300	dhx40	94	41.245	ENSGACG00000003736	dhx8	56	41.245
ENSGACG00000006300	dhx40	90	41.590	ENSGACG00000015776	dhx38	53	40.870
ENSGACG00000006300	dhx40	90	40.752	ENSGACG00000001290	zgc:158828	97	38.612
ENSGACG00000006300	dhx40	86	40.816	ENSGACG00000003927	dhx37	58	40.816
ENSGACG00000006300	dhx40	94	41.823	ENSGACG00000003750	dhx8	60	41.618
ENSGACG00000006300	dhx40	83	38.776	ENSGACG00000010276	dhx36	59	38.776
ENSGACG00000006300	dhx40	90	37.838	ENSGACG00000020229	dhx33	93	37.838
ENSGACG00000006300	dhx40	94	40.202	ENSGACG00000017826	DHX15	85	40.855

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000006300	dhx40	99	65.145	ENSG00000108406	DHX40	99	63.406	Homo_sapiens
ENSGACG00000006300	dhx40	98	88.764	ENSAPOG00000018707	dhx40	97	88.734	Acanthochromis_polyacanthus
ENSGACG00000006300	dhx40	99	65.007	ENSAMEG00000011567	DHX40	92	65.320	Ailuropoda_melanoleuca
ENSGACG00000006300	dhx40	98	88.062	ENSACIG00000020220	dhx40	97	88.039	Amphilophus_citrinellus
ENSGACG00000006300	dhx40	98	88.764	ENSAOCG00000000250	dhx40	97	88.734	Amphiprion_ocellaris
ENSGACG00000006300	dhx40	98	87.921	ENSAPEG00000022898	dhx40	96	87.900	Amphiprion_percula
ENSGACG00000006300	dhx40	98	89.185	ENSATEG00000023287	dhx40	97	89.152	Anabas_testudineus
ENSGACG00000006300	dhx40	91	69.665	ENSAPLG00000013368	DHX40	99	69.665	Anas_platyrhynchos
ENSGACG00000006300	dhx40	99	67.218	ENSACAG00000012418	DHX40	98	67.355	Anolis_carolinensis
ENSGACG00000006300	dhx40	99	65.284	ENSANAG00000019888	DHX40	95	62.649	Aotus_nancymaae
ENSGACG00000006300	dhx40	98	87.079	ENSACLG00000024213	dhx40	97	87.065	Astatotilapia_calliptera
ENSGACG00000006300	dhx40	85	74.230	ENSAMXG00000002031	dhx40	98	74.230	Astyanax_mexicanus
ENSGACG00000006300	dhx40	99	65.145	ENSBTAG00000017868	DHX40	93	64.883	Bos_taurus
ENSGACG00000006300	dhx40	99	65.145	ENSCJAG00000001554	DHX40	96	61.786	Callithrix_jacchus
ENSGACG00000006300	dhx40	99	64.869	ENSCAFG00000017625	DHX40	92	64.583	Canis_familiaris
ENSGACG00000006300	dhx40	99	65.007	ENSCAFG00020026016	DHX40	83	65.320	Canis_lupus_dingo
ENSGACG00000006300	dhx40	99	65.145	ENSCHIG00000016173	DHX40	93	64.883	Capra_hircus
ENSGACG00000006300	dhx40	99	65.007	ENSTSYG00000034797	DHX40	93	64.746	Carlito_syrichta
ENSGACG00000006300	dhx40	94	56.452	ENSCAPG00000016034	DHX40	96	56.452	Cavia_aperea
ENSGACG00000006300	dhx40	99	65.007	ENSCPOG00000003432	DHX40	99	65.868	Cavia_porcellus
ENSGACG00000006300	dhx40	90	67.114	ENSCCAG00000028712	DHX40	94	67.647	Cebus_capucinus
ENSGACG00000006300	dhx40	99	61.846	ENSCATG00000030038	DHX40	92	62.136	Cercocebus_atys
ENSGACG00000006300	dhx40	99	65.007	ENSCLAG00000012016	DHX40	99	65.868	Chinchilla_lanigera
ENSGACG00000006300	dhx40	88	61.199	ENSCSAG00000005860	DHX40	98	61.526	Chlorocebus_sabaeus
ENSGACG00000006300	dhx40	99	65.007	ENSCHOG00000004423	DHX40	98	64.609	Choloepus_hoffmanni
ENSGACG00000006300	dhx40	99	71.111	ENSCPBG00000006085	DHX40	96	71.170	Chrysemys_picta_bellii
ENSGACG00000006300	dhx40	99	65.145	ENSCANG00000038492	DHX40	95	62.500	Colobus_angolensis_palliatus
ENSGACG00000006300	dhx40	99	64.869	ENSCGRG00001000389	Dhx40	93	64.609	Cricetulus_griseus_chok1gshd
ENSGACG00000006300	dhx40	99	64.869	ENSCGRG00000009491	Dhx40	93	64.609	Cricetulus_griseus_crigri
ENSGACG00000006300	dhx40	100	84.552	ENSCSEG00000002696	dhx40	98	84.552	Cynoglossus_semilaevis
ENSGACG00000006300	dhx40	99	85.892	ENSCVAG00000018991	dhx40	97	86.072	Cyprinodon_variegatus
ENSGACG00000006300	dhx40	99	75.833	ENSDARG00000041586	dhx40	97	75.939	Danio_rerio
ENSGACG00000006300	dhx40	99	65.422	ENSDNOG00000025497	DHX40	92	65.738	Dasypus_novemcinctus
ENSGACG00000006300	dhx40	99	61.997	ENSDORG00000006521	Dhx40	93	61.591	Dipodomys_ordii
ENSGACG00000006300	dhx40	81	56.336	ENSETEG00000018771	DHX40	75	56.336	Echinops_telfairi
ENSGACG00000006300	dhx40	99	65.145	ENSEASG00005002476	DHX40	93	64.883	Equus_asinus_asinus
ENSGACG00000006300	dhx40	99	65.145	ENSECAG00000018606	DHX40	93	64.883	Equus_caballus
ENSGACG00000006300	dhx40	99	61.826	ENSEEUG00000002531	DHX40	93	61.591	Erinaceus_europaeus
ENSGACG00000006300	dhx40	99	81.881	ENSELUG00000008644	dhx40	97	81.780	Esox_lucius
ENSGACG00000006300	dhx40	99	65.145	ENSFCAG00000001409	DHX40	92	65.460	Felis_catus
ENSGACG00000006300	dhx40	99	68.100	ENSFALG00000005587	DHX40	98	68.100	Ficedula_albicollis
ENSGACG00000006300	dhx40	99	65.007	ENSFDAG00000017214	DHX40	99	65.868	Fukomys_damarensis
ENSGACG00000006300	dhx40	98	85.674	ENSFHEG00000001190	dhx40	97	85.675	Fundulus_heteroclitus
ENSGACG00000006300	dhx40	99	80.699	ENSGMOG00000001188	dhx40	99	80.699	Gadus_morhua
ENSGACG00000006300	dhx40	86	68.590	ENSGALG00000005126	DHX40	99	68.581	Gallus_gallus
ENSGACG00000006300	dhx40	98	86.096	ENSGAFG00000014480	dhx40	97	86.092	Gambusia_affinis
ENSGACG00000006300	dhx40	99	70.556	ENSGAGG00000024012	DHX40	96	70.613	Gopherus_agassizii
ENSGACG00000006300	dhx40	53	62.532	ENSGGOG00000042982	-	99	62.532	Gorilla_gorilla
ENSGACG00000006300	dhx40	98	87.360	ENSHBUG00000022398	dhx40	97	87.344	Haplochromis_burtoni
ENSGACG00000006300	dhx40	99	65.049	ENSHGLG00000006600	DHX40	99	65.868	Heterocephalus_glaber_female
ENSGACG00000006300	dhx40	87	57.460	ENSHGLG00000006411	-	89	57.460	Heterocephalus_glaber_female
ENSGACG00000006300	dhx40	87	57.460	ENSHGLG00100009091	-	88	57.460	Heterocephalus_glaber_male
ENSGACG00000006300	dhx40	99	65.049	ENSHGLG00100009935	-	99	65.868	Heterocephalus_glaber_male
ENSGACG00000006300	dhx40	99	86.011	ENSHCOG00000012913	dhx40	96	85.814	Hippocampus_comes
ENSGACG00000006300	dhx40	99	76.316	ENSIPUG00000015673	dhx40	98	75.967	Ictalurus_punctatus
ENSGACG00000006300	dhx40	99	60.996	ENSSTOG00000016219	DHX40	99	65.868	Ictidomys_tridecemlineatus
ENSGACG00000006300	dhx40	99	61.826	ENSJJAG00000010433	Dhx40	93	61.591	Jaculus_jaculus
ENSGACG00000006300	dhx40	98	87.640	ENSKMAG00000003505	dhx40	97	87.622	Kryptolebias_marmoratus
ENSGACG00000006300	dhx40	100	87.845	ENSLBEG00000018707	dhx40	99	87.845	Labrus_bergylta
ENSGACG00000006300	dhx40	99	72.276	ENSLACG00000008892	DHX40	96	72.576	Latimeria_chalumnae
ENSGACG00000006300	dhx40	99	72.802	ENSLOCG00000003916	dhx40	99	72.490	Lepisosteus_oculatus
ENSGACG00000006300	dhx40	99	64.869	ENSLAFG00000000087	DHX40	93	64.609	Loxodonta_africana
ENSGACG00000006300	dhx40	99	65.284	ENSMFAG00000041526	DHX40	95	62.649	Macaca_fascicularis
ENSGACG00000006300	dhx40	99	60.719	ENSMNEG00000043921	DHX40	92	61.003	Macaca_nemestrina
ENSGACG00000006300	dhx40	99	65.284	ENSMLEG00000043033	DHX40	95	62.649	Mandrillus_leucophaeus
ENSGACG00000006300	dhx40	98	89.326	ENSMAMG00000001985	dhx40	97	89.291	Mastacembelus_armatus
ENSGACG00000006300	dhx40	98	87.079	ENSMZEG00005013826	dhx40	97	87.065	Maylandia_zebra
ENSGACG00000006300	dhx40	88	68.446	ENSMGAG00000007238	DHX40	99	68.545	Meleagris_gallopavo
ENSGACG00000006300	dhx40	88	66.500	ENSMAUG00000014047	Dhx40	89	66.500	Mesocricetus_auratus
ENSGACG00000006300	dhx40	99	65.145	ENSMICG00000027647	DHX40	96	61.912	Microcebus_murinus
ENSGACG00000006300	dhx40	99	64.592	ENSMOCG00000022697	Dhx40	93	64.335	Microtus_ochrogaster
ENSGACG00000006300	dhx40	98	84.831	ENSMMOG00000005353	dhx40	96	84.701	Mola_mola
ENSGACG00000006300	dhx40	99	66.528	ENSMODG00000014468	DHX40	94	66.436	Monodelphis_domestica
ENSGACG00000006300	dhx40	99	87.275	ENSMALG00000012529	dhx40	97	87.204	Monopterus_albus
ENSGACG00000006300	dhx40	99	65.007	MGP_CAROLIEiJ_G0016920	Dhx40	99	65.269	Mus_caroli
ENSGACG00000006300	dhx40	99	65.145	ENSMUSG00000018425	Dhx40	99	65.269	Mus_musculus
ENSGACG00000006300	dhx40	99	64.869	MGP_PahariEiJ_G0018050	Dhx40	99	65.269	Mus_pahari
ENSGACG00000006300	dhx40	99	65.145	MGP_SPRETEiJ_G0017766	Dhx40	99	65.269	Mus_spretus
ENSGACG00000006300	dhx40	99	65.145	ENSMPUG00000015213	DHX40	92	65.460	Mustela_putorius_furo
ENSGACG00000006300	dhx40	99	65.055	ENSMLUG00000003644	DHX40	92	65.369	Myotis_lucifugus
ENSGACG00000006300	dhx40	99	64.869	ENSNGAG00000014507	Dhx40	93	64.609	Nannospalax_galili
ENSGACG00000006300	dhx40	98	86.517	ENSNBRG00000018144	dhx40	97	86.509	Neolamprologus_brichardi
ENSGACG00000006300	dhx40	76	66.667	ENSMEUG00000002887	-	86	66.667	Notamacropus_eugenii
ENSGACG00000006300	dhx40	99	64.730	ENSODEG00000013635	DHX40	99	65.868	Octodon_degus
ENSGACG00000006300	dhx40	99	87.673	ENSONIG00000005195	dhx40	99	87.535	Oreochromis_niloticus
ENSGACG00000006300	dhx40	99	71.706	ENSOANG00000008516	DHX40	96	72.006	Ornithorhynchus_anatinus
ENSGACG00000006300	dhx40	99	86.307	ENSORLG00000014185	dhx40	98	86.657	Oryzias_latipes
ENSGACG00000006300	dhx40	99	85.754	ENSORLG00015016235	dhx40	98	86.096	Oryzias_latipes_hsok
ENSGACG00000006300	dhx40	99	85.477	ENSOMEG00000006570	dhx40	99	85.396	Oryzias_melastigma
ENSGACG00000006300	dhx40	99	65.422	ENSOGAG00000007790	DHX40	93	65.158	Otolemur_garnettii
ENSGACG00000006300	dhx40	99	65.145	ENSOARG00000012632	DHX40	93	64.883	Ovis_aries
ENSGACG00000006300	dhx40	99	64.869	ENSPPAG00000032782	DHX40	95	62.202	Pan_paniscus
ENSGACG00000006300	dhx40	99	65.145	ENSPPRG00000010073	DHX40	92	65.460	Panthera_pardus
ENSGACG00000006300	dhx40	99	65.007	ENSPTIG00000006557	DHX40	92	65.320	Panthera_tigris_altaica
ENSGACG00000006300	dhx40	99	65.284	ENSPANG00000022266	DHX40	95	62.649	Papio_anubis
ENSGACG00000006300	dhx40	99	75.795	ENSPKIG00000013016	dhx40	97	75.485	Paramormyrops_kingsleyae
ENSGACG00000006300	dhx40	99	70.417	ENSPSIG00000010463	DHX40	90	70.474	Pelodiscus_sinensis
ENSGACG00000006300	dhx40	99	84.979	ENSPMGG00000015257	dhx40	97	84.840	Periophthalmus_magnuspinnatus
ENSGACG00000006300	dhx40	99	65.145	ENSPEMG00000013338	Dhx40	99	65.868	Peromyscus_maniculatus_bairdii
ENSGACG00000006300	dhx40	99	66.713	ENSPCIG00000021874	DHX40	93	66.713	Phascolarctos_cinereus
ENSGACG00000006300	dhx40	98	86.376	ENSPFOG00000006579	dhx40	97	86.370	Poecilia_formosa
ENSGACG00000006300	dhx40	98	86.376	ENSPLAG00000007062	dhx40	97	86.370	Poecilia_latipinna
ENSGACG00000006300	dhx40	98	86.236	ENSPMEG00000008446	dhx40	97	86.231	Poecilia_mexicana
ENSGACG00000006300	dhx40	99	86.445	ENSPREG00000005584	dhx40	97	86.509	Poecilia_reticulata
ENSGACG00000006300	dhx40	99	61.826	ENSPPYG00000008812	DHX40	91	62.117	Pongo_abelii
ENSGACG00000006300	dhx40	77	65.724	ENSPCAG00000006468	DHX40	76	65.724	Procavia_capensis
ENSGACG00000006300	dhx40	79	60.281	ENSPCOG00000008219	DHX40	85	60.000	Propithecus_coquereli
ENSGACG00000006300	dhx40	98	86.517	ENSPNYG00000013343	dhx40	97	86.509	Pundamilia_nyererei
ENSGACG00000006300	dhx40	99	72.299	ENSPNAG00000024815	dhx40	98	72.099	Pygocentrus_nattereri
ENSGACG00000006300	dhx40	99	65.145	ENSRNOG00000004549	Dhx40	93	64.883	Rattus_norvegicus
ENSGACG00000006300	dhx40	99	65.284	ENSSBOG00000024911	DHX40	95	62.649	Saimiri_boliviensis_boliviensis
ENSGACG00000006300	dhx40	99	67.268	ENSSHAG00000016859	DHX40	93	67.270	Sarcophilus_harrisii
ENSGACG00000006300	dhx40	100	75.967	ENSSFOG00015003020	dhx40	97	76.177	Scleropages_formosus
ENSGACG00000006300	dhx40	99	89.930	ENSSMAG00000001178	dhx40	97	90.028	Scophthalmus_maximus
ENSGACG00000006300	dhx40	98	90.871	ENSSDUG00000012511	dhx40	97	90.821	Seriola_dumerili
ENSGACG00000006300	dhx40	98	90.590	ENSSLDG00000010146	dhx40	97	90.542	Seriola_lalandi_dorsalis
ENSGACG00000006300	dhx40	86	65.942	ENSSARG00000009800	DHX40	79	66.504	Sorex_araneus
ENSGACG00000006300	dhx40	99	70.195	ENSSPUG00000016309	DHX40	96	70.195	Sphenodon_punctatus
ENSGACG00000006300	dhx40	98	88.343	ENSSPAG00000015901	dhx40	97	88.317	Stegastes_partitus
ENSGACG00000006300	dhx40	99	65.145	ENSSSCG00000017665	DHX40	93	64.883	Sus_scrofa
ENSGACG00000006300	dhx40	99	69.167	ENSTGUG00000007512	DHX40	98	69.220	Taeniopygia_guttata
ENSGACG00000006300	dhx40	100	81.077	ENSTRUG00000010369	dhx40	98	81.077	Takifugu_rubripes
ENSGACG00000006300	dhx40	99	80.556	ENSTNIG00000004503	dhx40	99	80.389	Tetraodon_nigroviridis
ENSGACG00000006300	dhx40	99	64.730	ENSTBEG00000014980	DHX40	93	64.472	Tupaia_belangeri
ENSGACG00000006300	dhx40	99	61.442	ENSTTRG00000017203	DHX40	93	61.126	Tursiops_truncatus
ENSGACG00000006300	dhx40	99	65.594	ENSUAMG00000009734	DHX40	98	65.915	Ursus_americanus
ENSGACG00000006300	dhx40	99	65.007	ENSUMAG00000022721	DHX40	92	65.320	Ursus_maritimus
ENSGACG00000006300	dhx40	99	65.007	ENSVPAG00000009355	DHX40	97	64.746	Vicugna_pacos
ENSGACG00000006300	dhx40	99	65.007	ENSVVUG00000013502	DHX40	83	65.320	Vulpes_vulpes
ENSGACG00000006300	dhx40	99	64.820	ENSXETG00000010939	dhx40	98	65.000	Xenopus_tropicalis
ENSGACG00000006300	dhx40	98	86.037	ENSXCOG00000001822	dhx40	96	86.037	Xiphophorus_couchianus
ENSGACG00000006300	dhx40	98	86.096	ENSXMAG00000012466	dhx40	97	86.092	Xiphophorus_maculatus