EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000006442 (Gene tree)
Gene ID: -
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 19902 bases
Position: chrgroupXVII:5210996-5230897
Accession: ZDB-GENE-180313-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000008526	R3H	PF01424.22	6.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000008545	-	3009	-	ENSGACP00000008526	1002 (aa)	-	G3NT58

Gene Model

Click here to download ENSGACG00000006442's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000006442's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000006442	r3hdm2	91	38.752	ENSGACG00000014925	r3hdm1	99	38.154

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000006442	r3hdm2	100	66.372	ENSG00000179912	R3HDM2	100	62.661	Homo_sapiens
ENSGACG00000006442	r3hdm2	100	92.323	ENSAPOG00000020341	r3hdm2	95	92.218	Acanthochromis_polyacanthus
ENSGACG00000006442	r3hdm2	61	37.165	ENSAPOG00000021873	-	70	39.692	Acanthochromis_polyacanthus
ENSGACG00000006442	r3hdm2	100	68.695	ENSAMEG00000004812	R3HDM2	95	67.483	Ailuropoda_melanoleuca
ENSGACG00000006442	r3hdm2	99	83.956	ENSACIG00000016146	r3hdm2	98	82.038	Amphilophus_citrinellus
ENSGACG00000006442	r3hdm2	100	93.294	ENSAOCG00000023694	r3hdm2	95	93.294	Amphiprion_ocellaris
ENSGACG00000006442	r3hdm2	100	90.573	ENSAPEG00000008851	r3hdm2	99	89.387	Amphiprion_percula
ENSGACG00000006442	r3hdm2	99	87.563	ENSATEG00000025024	r3hdm2	100	86.560	Anabas_testudineus
ENSGACG00000006442	r3hdm2	99	80.571	ENSAPLG00000004298	R3HDM2	95	62.903	Anas_platyrhynchos
ENSGACG00000006442	r3hdm2	100	62.704	ENSACAG00000006388	R3HDM2	95	60.845	Anolis_carolinensis
ENSGACG00000006442	r3hdm2	100	66.240	ENSANAG00000025397	-	95	65.456	Aotus_nancymaae
ENSGACG00000006442	r3hdm2	100	62.426	ENSANAG00000031310	-	96	61.100	Aotus_nancymaae
ENSGACG00000006442	r3hdm2	100	91.529	ENSACLG00000019106	r3hdm2	95	90.643	Astatotilapia_calliptera
ENSGACG00000006442	r3hdm2	99	68.218	ENSAMXG00000017180	r3hdm2	99	69.307	Astyanax_mexicanus
ENSGACG00000006442	r3hdm2	100	65.779	ENSBTAG00000018361	R3HDM2	95	63.717	Bos_taurus
ENSGACG00000006442	r3hdm2	100	66.207	ENSCJAG00000007365	R3HDM2	95	65.554	Callithrix_jacchus
ENSGACG00000006442	r3hdm2	98	68.876	ENSCAFG00000000215	R3HDM2	95	66.077	Canis_familiaris
ENSGACG00000006442	r3hdm2	100	68.338	ENSCAFG00020023713	R3HDM2	95	68.240	Canis_lupus_dingo
ENSGACG00000006442	r3hdm2	100	68.966	ENSCHIG00000014022	R3HDM2	95	68.173	Capra_hircus
ENSGACG00000006442	r3hdm2	100	65.585	ENSTSYG00000001449	R3HDM2	95	65.388	Carlito_syrichta
ENSGACG00000006442	r3hdm2	100	69.951	ENSCPOG00000009217	R3HDM2	95	68.670	Cavia_porcellus
ENSGACG00000006442	r3hdm2	89	66.149	ENSCCAG00000026083	R3HDM2	94	63.606	Cebus_capucinus
ENSGACG00000006442	r3hdm2	100	68.437	ENSCATG00000036929	R3HDM2	95	67.745	Cercocebus_atys
ENSGACG00000006442	r3hdm2	100	69.185	ENSCLAG00000011997	R3HDM2	95	68.597	Chinchilla_lanigera
ENSGACG00000006442	r3hdm2	100	67.875	ENSCSAG00000004911	R3HDM2	95	66.406	Chlorocebus_sabaeus
ENSGACG00000006442	r3hdm2	73	71.903	ENSCHOG00000005636	R3HDM2	84	72.788	Choloepus_hoffmanni
ENSGACG00000006442	r3hdm2	100	66.251	ENSCPBG00000013922	R3HDM2	95	66.059	Chrysemys_picta_bellii
ENSGACG00000006442	r3hdm2	100	68.374	ENSCANG00000043807	R3HDM2	95	67.713	Colobus_angolensis_palliatus
ENSGACG00000006442	r3hdm2	100	66.830	ENSCGRG00001017324	R3hdm2	95	64.865	Cricetulus_griseus_chok1gshd
ENSGACG00000006442	r3hdm2	100	66.830	ENSCGRG00000003862	R3hdm2	95	64.865	Cricetulus_griseus_crigri
ENSGACG00000006442	r3hdm2	100	89.883	ENSCSEG00000010925	r3hdm2	95	89.679	Cynoglossus_semilaevis
ENSGACG00000006442	r3hdm2	100	88.390	ENSCVAG00000009058	r3hdm2	95	88.098	Cyprinodon_variegatus
ENSGACG00000006442	r3hdm2	99	73.035	ENSDARG00000102610	r3hdm2	99	73.439	Danio_rerio
ENSGACG00000006442	r3hdm2	100	66.732	ENSDNOG00000015033	R3HDM2	100	67.410	Dasypus_novemcinctus
ENSGACG00000006442	r3hdm2	100	63.277	ENSDORG00000011462	R3hdm2	99	61.914	Dipodomys_ordii
ENSGACG00000006442	r3hdm2	100	69.057	ENSEASG00005007091	R3HDM2	95	68.664	Equus_asinus_asinus
ENSGACG00000006442	r3hdm2	100	69.231	ENSECAG00000003157	R3HDM2	95	68.468	Equus_caballus
ENSGACG00000006442	r3hdm2	100	81.340	ENSELUG00000015969	r3hdm2	94	80.383	Esox_lucius
ENSGACG00000006442	r3hdm2	100	68.664	ENSFCAG00000000192	R3HDM2	94	68.072	Felis_catus
ENSGACG00000006442	r3hdm2	86	63.303	ENSFALG00000000255	R3HDM2	92	62.529	Ficedula_albicollis
ENSGACG00000006442	r3hdm2	100	68.658	ENSFDAG00000019385	R3HDM2	95	68.168	Fukomys_damarensis
ENSGACG00000006442	r3hdm2	100	88.997	ENSFHEG00000016484	r3hdm2	95	88.780	Fundulus_heteroclitus
ENSGACG00000006442	r3hdm2	100	83.813	ENSGMOG00000007961	r3hdm2	100	84.409	Gadus_morhua
ENSGACG00000006442	r3hdm2	100	65.778	ENSGALG00000043736	R3HDM2	95	64.655	Gallus_gallus
ENSGACG00000006442	r3hdm2	100	90.029	ENSGAFG00000013887	r3hdm2	95	89.932	Gambusia_affinis
ENSGACG00000006442	r3hdm2	100	65.676	ENSGAGG00000017797	R3HDM2	94	65.197	Gopherus_agassizii
ENSGACG00000006442	r3hdm2	100	68.437	ENSGGOG00000015007	R3HDM2	95	67.745	Gorilla_gorilla
ENSGACG00000006442	r3hdm2	94	59.224	ENSHGLG00000010421	-	97	57.411	Heterocephalus_glaber_female
ENSGACG00000006442	r3hdm2	100	68.959	ENSHGLG00000010434	-	95	68.468	Heterocephalus_glaber_female
ENSGACG00000006442	r3hdm2	98	58.300	ENSHGLG00100018871	-	96	57.186	Heterocephalus_glaber_male
ENSGACG00000006442	r3hdm2	100	68.861	ENSHGLG00100004183	-	95	68.369	Heterocephalus_glaber_male
ENSGACG00000006442	r3hdm2	100	87.052	ENSHCOG00000001142	r3hdm2	92	88.083	Hippocampus_comes
ENSGACG00000006442	r3hdm2	100	76.323	ENSIPUG00000023873	r3hdm2	95	75.553	Ictalurus_punctatus
ENSGACG00000006442	r3hdm2	100	61.886	ENSSTOG00000013424	R3HDM2	94	60.447	Ictidomys_tridecemlineatus
ENSGACG00000006442	r3hdm2	100	68.473	ENSJJAG00000010001	R3hdm2	95	67.485	Jaculus_jaculus
ENSGACG00000006442	r3hdm2	100	90.936	ENSKMAG00000012695	r3hdm2	93	90.838	Kryptolebias_marmoratus
ENSGACG00000006442	r3hdm2	100	90.750	ENSLBEG00000013115	r3hdm2	92	90.838	Labrus_bergylta
ENSGACG00000006442	r3hdm2	99	66.963	ENSLACG00000019064	r3hdm2	100	64.862	Latimeria_chalumnae
ENSGACG00000006442	r3hdm2	100	74.336	ENSLOCG00000005976	r3hdm2	95	72.861	Lepisosteus_oculatus
ENSGACG00000006442	r3hdm2	100	69.003	ENSLAFG00000006510	R3HDM2	95	67.087	Loxodonta_africana
ENSGACG00000006442	r3hdm2	100	68.431	ENSMFAG00000036385	R3HDM2	95	67.483	Macaca_fascicularis
ENSGACG00000006442	r3hdm2	100	69.216	ENSMMUG00000021789	R3HDM2	95	68.266	Macaca_mulatta
ENSGACG00000006442	r3hdm2	100	68.400	ENSMNEG00000025314	R3HDM2	95	67.417	Macaca_nemestrina
ENSGACG00000006442	r3hdm2	100	68.535	ENSMLEG00000028915	R3HDM2	95	67.843	Mandrillus_leucophaeus
ENSGACG00000006442	r3hdm2	100	91.748	ENSMAMG00000009793	r3hdm2	95	91.059	Mastacembelus_armatus
ENSGACG00000006442	r3hdm2	100	91.529	ENSMZEG00005007319	r3hdm2	95	90.643	Maylandia_zebra
ENSGACG00000006442	r3hdm2	100	65.916	ENSMICG00000012389	R3HDM2	95	64.976	Microcebus_murinus
ENSGACG00000006442	r3hdm2	100	67.321	ENSMOCG00000014425	R3hdm2	95	66.373	Microtus_ochrogaster
ENSGACG00000006442	r3hdm2	100	84.059	ENSMMOG00000007448	r3hdm2	99	82.656	Mola_mola
ENSGACG00000006442	r3hdm2	90	87.884	ENSMALG00000010211	r3hdm2	98	86.799	Monopterus_albus
ENSGACG00000006442	r3hdm2	100	67.812	MGP_CAROLIEiJ_G0015896	R3hdm2	95	66.536	Mus_caroli
ENSGACG00000006442	r3hdm2	100	68.173	ENSMUSG00000025404	R3hdm2	95	66.797	Mus_musculus
ENSGACG00000006442	r3hdm2	100	67.882	MGP_PahariEiJ_G0031189	R3hdm2	95	66.601	Mus_pahari
ENSGACG00000006442	r3hdm2	100	68.039	MGP_SPRETEiJ_G0016722	R3hdm2	95	66.667	Mus_spretus
ENSGACG00000006442	r3hdm2	98	68.952	ENSMPUG00000001818	R3HDM2	91	68.543	Mustela_putorius_furo
ENSGACG00000006442	r3hdm2	100	68.996	ENSMLUG00000004980	R3HDM2	95	68.504	Myotis_lucifugus
ENSGACG00000006442	r3hdm2	100	68.639	ENSNGAG00000018800	R3hdm2	95	67.976	Nannospalax_galili
ENSGACG00000006442	r3hdm2	99	84.068	ENSNBRG00000004483	r3hdm2	100	82.766	Neolamprologus_brichardi
ENSGACG00000006442	r3hdm2	100	68.701	ENSNLEG00000017351	R3HDM2	95	67.910	Nomascus_leucogenys
ENSGACG00000006442	r3hdm2	100	59.449	ENSMEUG00000008588	R3HDM2	95	58.505	Notamacropus_eugenii
ENSGACG00000006442	r3hdm2	100	59.803	ENSOPRG00000013670	R3HDM2	94	57.364	Ochotona_princeps
ENSGACG00000006442	r3hdm2	100	87.686	ENSONIG00000005075	r3hdm2	95	86.792	Oreochromis_niloticus
ENSGACG00000006442	r3hdm2	100	68.689	ENSOCUG00000013258	R3HDM2	95	68.004	Oryctolagus_cuniculus
ENSGACG00000006442	r3hdm2	100	88.281	ENSORLG00000005502	r3hdm2	95	88.184	Oryzias_latipes
ENSGACG00000006442	r3hdm2	100	88.184	ENSORLG00020017069	r3hdm2	95	88.086	Oryzias_latipes_hni
ENSGACG00000006442	r3hdm2	100	88.184	ENSORLG00015012735	r3hdm2	95	88.086	Oryzias_latipes_hsok
ENSGACG00000006442	r3hdm2	99	81.000	ENSOMEG00000018079	r3hdm2	93	80.581	Oryzias_melastigma
ENSGACG00000006442	r3hdm2	100	65.914	ENSOGAG00000012055	R3HDM2	95	65.358	Otolemur_garnettii
ENSGACG00000006442	r3hdm2	96	58.299	ENSOGAG00000027966	-	90	55.637	Otolemur_garnettii
ENSGACG00000006442	r3hdm2	100	65.551	ENSOARG00000006929	R3HDM2	95	63.690	Ovis_aries
ENSGACG00000006442	r3hdm2	100	68.633	ENSPPAG00000034395	R3HDM2	95	67.941	Pan_paniscus
ENSGACG00000006442	r3hdm2	100	65.619	ENSPPRG00000009240	R3HDM2	95	65.230	Panthera_pardus
ENSGACG00000006442	r3hdm2	100	65.619	ENSPTIG00000008752	R3HDM2	95	65.230	Panthera_tigris_altaica
ENSGACG00000006442	r3hdm2	100	68.529	ENSPTRG00000046457	R3HDM2	95	67.581	Pan_troglodytes
ENSGACG00000006442	r3hdm2	99	66.305	ENSPANG00000024002	R3HDM2	97	65.619	Papio_anubis
ENSGACG00000006442	r3hdm2	100	80.990	ENSPKIG00000003171	r3hdm2	95	79.307	Paramormyrops_kingsleyae
ENSGACG00000006442	r3hdm2	99	83.082	ENSPMGG00000007061	r3hdm2	99	81.351	Periophthalmus_magnuspinnatus
ENSGACG00000006442	r3hdm2	100	67.685	ENSPEMG00000015964	R3hdm2	95	66.897	Peromyscus_maniculatus_bairdii
ENSGACG00000006442	r3hdm2	100	64.961	ENSPCIG00000023841	R3HDM2	100	61.224	Phascolarctos_cinereus
ENSGACG00000006442	r3hdm2	99	81.043	ENSPFOG00000006077	r3hdm2	98	80.875	Poecilia_formosa
ENSGACG00000006442	r3hdm2	100	88.098	ENSPLAG00000002971	r3hdm2	95	87.122	Poecilia_latipinna
ENSGACG00000006442	r3hdm2	100	88.098	ENSPMEG00000005330	r3hdm2	95	87.122	Poecilia_mexicana
ENSGACG00000006442	r3hdm2	100	89.268	ENSPREG00000008424	r3hdm2	95	89.366	Poecilia_reticulata
ENSGACG00000006442	r3hdm2	98	61.178	ENSPPYG00000004685	R3HDM2	77	59.920	Pongo_abelii
ENSGACG00000006442	r3hdm2	92	80.935	ENSPCAG00000014642	R3HDM2	92	82.014	Procavia_capensis
ENSGACG00000006442	r3hdm2	100	66.143	ENSPCOG00000013201	R3HDM2	95	65.880	Propithecus_coquereli
ENSGACG00000006442	r3hdm2	100	69.125	ENSPVAG00000003967	R3HDM2	95	67.349	Pteropus_vampyrus
ENSGACG00000006442	r3hdm2	99	82.934	ENSPNYG00000013479	r3hdm2	100	81.737	Pundamilia_nyererei
ENSGACG00000006442	r3hdm2	100	78.227	ENSPNAG00000017473	r3hdm2	95	79.267	Pygocentrus_nattereri
ENSGACG00000006442	r3hdm2	100	67.255	ENSRNOG00000007801	R3hdm2	95	66.080	Rattus_norvegicus
ENSGACG00000006442	r3hdm2	100	64.370	ENSRBIG00000037403	R3HDM2	95	63.592	Rhinopithecus_bieti
ENSGACG00000006442	r3hdm2	100	69.390	ENSRROG00000022271	R3HDM2	95	67.812	Rhinopithecus_roxellana
ENSGACG00000006442	r3hdm2	100	66.207	ENSSBOG00000023547	R3HDM2	95	65.554	Saimiri_boliviensis_boliviensis
ENSGACG00000006442	r3hdm2	100	65.053	ENSSHAG00000003511	R3HDM2	95	65.588	Sarcophilus_harrisii
ENSGACG00000006442	r3hdm2	99	76.412	ENSSFOG00015011219	r3hdm2	99	75.322	Scleropages_formosus
ENSGACG00000006442	r3hdm2	100	90.069	ENSSMAG00000012073	r3hdm2	95	91.061	Scophthalmus_maximus
ENSGACG00000006442	r3hdm2	100	90.546	ENSSDUG00000019269	r3hdm2	95	89.561	Seriola_dumerili
ENSGACG00000006442	r3hdm2	100	92.383	ENSSLDG00000005252	r3hdm2	95	92.473	Seriola_lalandi_dorsalis
ENSGACG00000006442	r3hdm2	90	62.301	ENSSARG00000003958	R3HDM2	89	60.885	Sorex_araneus
ENSGACG00000006442	r3hdm2	100	61.090	ENSSPUG00000014132	R3HDM2	95	59.810	Sphenodon_punctatus
ENSGACG00000006442	r3hdm2	100	90.282	ENSSPAG00000022594	r3hdm2	95	89.397	Stegastes_partitus
ENSGACG00000006442	r3hdm2	100	65.779	ENSSSCG00000026498	R3HDM2	100	68.111	Sus_scrofa
ENSGACG00000006442	r3hdm2	72	66.171	ENSTGUG00000015881	R3HDM2	93	65.265	Taeniopygia_guttata
ENSGACG00000006442	r3hdm2	100	81.244	ENSTRUG00000015075	r3hdm2	99	80.138	Takifugu_rubripes
ENSGACG00000006442	r3hdm2	92	97.443	ENSTNIG00000007057	r3hdm2	99	81.262	Tetraodon_nigroviridis
ENSGACG00000006442	r3hdm2	82	68.683	ENSTBEG00000015967	R3HDM2	74	68.327	Tupaia_belangeri
ENSGACG00000006442	r3hdm2	100	59.131	ENSTTRG00000013082	R3HDM2	90	66.286	Tursiops_truncatus
ENSGACG00000006442	r3hdm2	100	67.815	ENSUAMG00000020913	R3HDM2	95	66.438	Ursus_americanus
ENSGACG00000006442	r3hdm2	96	67.692	ENSUMAG00000019179	R3HDM2	98	64.184	Ursus_maritimus
ENSGACG00000006442	r3hdm2	94	81.940	ENSVPAG00000008656	R3HDM2	88	83.929	Vicugna_pacos
ENSGACG00000006442	r3hdm2	98	68.775	ENSVVUG00000018014	R3HDM2	92	68.268	Vulpes_vulpes
ENSGACG00000006442	r3hdm2	100	64.251	ENSXETG00000017153	r3hdm2	95	61.816	Xenopus_tropicalis
ENSGACG00000006442	r3hdm2	92	81.110	ENSXCOG00000013882	r3hdm2	100	80.043	Xiphophorus_couchianus
ENSGACG00000006442	r3hdm2	100	89.659	ENSXMAG00000017978	r3hdm2	95	89.756	Xiphophorus_maculatus