EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGACG00000006447 (Gene tree)
Gene ID
-
Gene Symbol
ybx1
Alias
Y-box binding protein 1|hm:zeh0308|nsep1|wu:fb01g10|wu:fb08c05|wu:fb16e10|wu:fj26c09|yb1|zfY1|zgc:85599
Full Name
Y box binding protein 1
Gene Type
protein_coding
Species
Gasterosteus_aculeatus
Status
putative
Strand
Plus strand
Length
4632 bases
Position
chrgroupXII:7879999-7884630
Accession
ZDB-GENE-000629-3
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGACP00000008523CSDPF00313.223.8e-2611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGACT00000008542-1421-ENSGACP00000008523304 (aa)-G3NT55
Gene Model
Click here to download ENSGACG00000006447's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000006447's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGACG00000006447ybx110060.641ENSG00000065978YBX110055.331Homo_sapiens
ENSGACG00000006447ybx110089.320ENSAPOG00000018321ybx110088.997Acanthochromis_polyacanthus
ENSGACG00000006447ybx19462.136ENSAMEG00000000494-8857.627Ailuropoda_melanoleuca
ENSGACG00000006447ybx110083.742ENSACIG00000022321ybx19693.258Amphilophus_citrinellus
ENSGACG00000006447ybx110086.174ENSAOCG00000009122ybx110086.174Amphiprion_ocellaris
ENSGACG00000006447ybx110091.475ENSAPEG00000014606ybx110091.475Amphiprion_percula
ENSGACG00000006447ybx110087.987ENSATEG00000012533ybx110087.662Anabas_testudineus
ENSGACG00000006447ybx19361.056ENSAPLG00000004899YBX19557.239Anas_platyrhynchos
ENSGACG00000006447ybx19255.743ENSANAG00000038455-10047.536Aotus_nancymaae
ENSGACG00000006447ybx110054.658ENSANAG00000031055-10043.413Aotus_nancymaae
ENSGACG00000006447ybx110061.652ENSANAG00000022793YBX110055.652Aotus_nancymaae
ENSGACG00000006447ybx110083.129ENSACLG00000022705ybx19693.137Astatotilapia_calliptera
ENSGACG00000006447ybx110072.256ENSAMXG00000014478ybx110070.303Astyanax_mexicanus
ENSGACG00000006447ybx110060.641ENSBTAG00000017368YBX110055.331Bos_taurus
ENSGACG00000006447ybx110060.641ENSCJAG00000003155YBX110055.331Callithrix_jacchus
ENSGACG00000006447ybx19264.667ENSCAFG00000002541YBX19054.755Canis_familiaris
ENSGACG00000006447ybx110061.846ENSCAFG00000017286-8558.249Canis_familiaris
ENSGACG00000006447ybx110052.870ENSCAFG00020014118-5753.883Canis_lupus_dingo
ENSGACG00000006447ybx110053.644ENSCAFG00020002915YBX110048.415Canis_lupus_dingo
ENSGACG00000006447ybx110053.231ENSCAFG00020024987-8848.485Canis_lupus_dingo
ENSGACG00000006447ybx19264.667ENSCAFG00020024089-10054.857Canis_lupus_dingo
ENSGACG00000006447ybx19264.667ENSCHIG00000014169-10054.755Capra_hircus
ENSGACG00000006447ybx110061.677ENSCHIG00000002879-10056.716Capra_hircus
ENSGACG00000006447ybx110061.610ENSTSYG00000006915-10054.740Carlito_syrichta
ENSGACG00000006447ybx18854.704ENSCAPG00000006287YBX110048.110Cavia_aperea
ENSGACG00000006447ybx19264.333ENSCPOG00000010888Ybx110055.043Cavia_porcellus
ENSGACG00000006447ybx110056.000ENSCCAG00000020730-10051.692Cebus_capucinus
ENSGACG00000006447ybx110056.740ENSCCAG00000025907-10057.367Cebus_capucinus
ENSGACG00000006447ybx19362.706ENSCCAG00000006015-9556.949Cebus_capucinus
ENSGACG00000006447ybx19260.927ENSCCAG00000024381-9756.997Cebus_capucinus
ENSGACG00000006447ybx19457.475ENSCCAG00000024658-8654.296Cebus_capucinus
ENSGACG00000006447ybx110051.335ENSCATG00000033345-10046.356Cercocebus_atys
ENSGACG00000006447ybx110060.641ENSCATG00000016344-10055.331Cercocebus_atys
ENSGACG00000006447ybx18864.460ENSCLAG00000002253YBX110057.732Chinchilla_lanigera
ENSGACG00000006447ybx18162.030ENSCSAG00000001168YBX19754.815Chlorocebus_sabaeus
ENSGACG00000006447ybx110057.143ENSCPBG00000009853-10054.070Chrysemys_picta_bellii
ENSGACG00000006447ybx18864.583ENSCANG00000035622-9857.877Colobus_angolensis_palliatus
ENSGACG00000006447ybx19262.791ENSCANG00000032054-9551.333Colobus_angolensis_palliatus
ENSGACG00000006447ybx19264.667ENSCGRG00001002534Ybx110055.652Cricetulus_griseus_chok1gshd
ENSGACG00000006447ybx18864.808ENSCGRG00000001303-10058.076Cricetulus_griseus_crigri
ENSGACG00000006447ybx110088.487ENSCSEG00000019270ybx110088.487Cynoglossus_semilaevis
ENSGACG00000006447ybx110087.541ENSCVAG00000002318ybx110087.541Cyprinodon_variegatus
ENSGACG00000006447ybx18477.174ENSDARG00000004757ybx110074.154Danio_rerio
ENSGACG00000006447ybx19247.475ENSDNOG00000049716-8540.203Dasypus_novemcinctus
ENSGACG00000006447ybx110052.802ENSDNOG00000036760-10046.647Dasypus_novemcinctus
ENSGACG00000006447ybx16944.255ENSDNOG00000042304-8643.128Dasypus_novemcinctus
ENSGACG00000006447ybx19646.885ENSETEG00000014789-5152.023Echinops_telfairi
ENSGACG00000006447ybx16346.411ENSETEG00000002044-6155.000Echinops_telfairi
ENSGACG00000006447ybx18162.030ENSETEG00000004125-7654.074Echinops_telfairi
ENSGACG00000006447ybx19254.730ENSEASG00005007816-9350.714Equus_asinus_asinus
ENSGACG00000006447ybx110054.519ENSEASG00005001276-10049.280Equus_asinus_asinus
ENSGACG00000006447ybx19155.556ENSEASG00005006426-7348.822Equus_asinus_asinus
ENSGACG00000006447ybx110053.097ENSEASG00005007667-10046.647Equus_asinus_asinus
ENSGACG00000006447ybx110053.936ENSECAG00000023592YBX110048.703Equus_caballus
ENSGACG00000006447ybx19957.440ENSEEUG00000007494-9146.939Erinaceus_europaeus
ENSGACG00000006447ybx16262.312ENSEEUG00000005657-8061.574Erinaceus_europaeus
ENSGACG00000006447ybx110060.641ENSFCAG00000022604-10055.331Felis_catus
ENSGACG00000006447ybx18756.491ENSFALG00000010305YBX19451.916Ficedula_albicollis
ENSGACG00000006447ybx110060.062ENSFDAG00000006047-9156.507Fukomys_damarensis
ENSGACG00000006447ybx18864.460ENSFDAG00000003679YBX110057.732Fukomys_damarensis
ENSGACG00000006447ybx110087.055ENSFHEG00000002081ybx110087.379Fundulus_heteroclitus
ENSGACG00000006447ybx110082.468ENSGMOG00000015216ybx110085.065Gadus_morhua
ENSGACG00000006447ybx110058.187ENSGALG00000004848YBX110054.783Gallus_gallus
ENSGACG00000006447ybx110087.702ENSGAFG00000019142ybx110087.379Gambusia_affinis
ENSGACG00000006447ybx19262.046ENSGAGG00000022893-7657.912Gopherus_agassizii
ENSGACG00000006447ybx19363.192ENSGGOG00000023581-8756.229Gorilla_gorilla
ENSGACG00000006447ybx110060.641ENSGGOG00000004758YBX110055.331Gorilla_gorilla
ENSGACG00000006447ybx110087.055ENSHBUG00000010038ybx110086.731Haplochromis_burtoni
ENSGACG00000006447ybx110052.907ENSHGLG00000017026-10048.094Heterocephalus_glaber_female
ENSGACG00000006447ybx110060.350ENSHGLG00000019595YBX110055.043Heterocephalus_glaber_female
ENSGACG00000006447ybx19456.610ENSHGLG00000010998-8350.877Heterocephalus_glaber_female
ENSGACG00000006447ybx19255.298ENSHGLG00000007474-6053.023Heterocephalus_glaber_female
ENSGACG00000006447ybx19953.459ENSHGLG00100015095-9950.462Heterocephalus_glaber_male
ENSGACG00000006447ybx110052.500ENSHGLG00100015192-5456.983Heterocephalus_glaber_male
ENSGACG00000006447ybx18865.141ENSHGLG00100013939-10057.639Heterocephalus_glaber_male
ENSGACG00000006447ybx110081.759ENSHCOG00000017322ybx110083.062Hippocampus_comes
ENSGACG00000006447ybx110069.578ENSIPUG00000021584ybx19686.441Ictalurus_punctatus
ENSGACG00000006447ybx18864.583ENSSTOG00000000116YBX19357.877Ictidomys_tridecemlineatus
ENSGACG00000006447ybx19151.014ENSJJAG00000002819-9146.644Jaculus_jaculus
ENSGACG00000006447ybx110088.487ENSKMAG00000013012ybx110088.487Kryptolebias_marmoratus
ENSGACG00000006447ybx110087.622ENSLBEG00000005509ybx110088.925Labrus_bergylta
ENSGACG00000006447ybx110063.492ENSLACG00000018135YBX110061.398Latimeria_chalumnae
ENSGACG00000006447ybx110072.866ENSLOCG00000002530ybx110067.988Lepisosteus_oculatus
ENSGACG00000006447ybx17956.809ENSLAFG00000031170-10050.752Loxodonta_africana
ENSGACG00000006447ybx110057.831ENSLAFG00000007597YBX110055.301Loxodonta_africana
ENSGACG00000006447ybx110060.641ENSMFAG00000040529-10055.331Macaca_fascicularis
ENSGACG00000006447ybx110059.587ENSMMUG00000013136-10054.985Macaca_mulatta
ENSGACG00000006447ybx110054.573ENSMMUG00000041539-6463.462Macaca_mulatta
ENSGACG00000006447ybx110060.641ENSMNEG00000044209-10055.043Macaca_nemestrina
ENSGACG00000006447ybx19354.730ENSMNEG00000041744-8654.386Macaca_nemestrina
ENSGACG00000006447ybx19459.000ENSMNEG00000029948-9452.759Macaca_nemestrina
ENSGACG00000006447ybx18864.808ENSMLEG00000012973YBX110058.076Mandrillus_leucophaeus
ENSGACG00000006447ybx19950.779ENSMLEG00000040651-9542.508Mandrillus_leucophaeus
ENSGACG00000006447ybx110083.436ENSMAMG00000018242ybx110082.209Mastacembelus_armatus
ENSGACG00000006447ybx110088.852ENSMZEG00005020438ybx110088.852Maylandia_zebra
ENSGACG00000006447ybx18864.685ENSMGAG00000006879YBX110056.655Meleagris_gallopavo
ENSGACG00000006447ybx19263.176ENSMICG00000046432-10051.576Microcebus_murinus
ENSGACG00000006447ybx110060.641ENSMICG00000014984-10055.460Microcebus_murinus
ENSGACG00000006447ybx110057.273ENSMICG00000038133-8754.483Microcebus_murinus
ENSGACG00000006447ybx19060.000ENSMOCG00000004348-8651.460Microtus_ochrogaster
ENSGACG00000006447ybx19963.578ENSMOCG00000010734-9957.282Microtus_ochrogaster
ENSGACG00000006447ybx110052.038ENSMOCG00000002864-8949.829Microtus_ochrogaster
ENSGACG00000006447ybx19581.587ENSMMOG00000014235ybx19095.349Mola_mola
ENSGACG00000006447ybx110062.539ENSMODG00000017214YBX110056.881Monodelphis_domestica
ENSGACG00000006447ybx110081.877ENSMALG00000001192ybx110081.672Monopterus_albus
ENSGACG00000006447ybx19265.000MGP_CAROLIEiJ_G0026396Ybx110059.366Mus_caroli
ENSGACG00000006447ybx19264.667ENSMUSG00000028639Ybx110055.652Mus_musculus
ENSGACG00000006447ybx19264.667MGP_PahariEiJ_G0028725Ybx110055.652Mus_pahari
ENSGACG00000006447ybx19264.667MGP_SPRETEiJ_G0027373Ybx110055.652Mus_spretus
ENSGACG00000006447ybx19059.524ENSMPUG00000013922-10049.008Mustela_putorius_furo
ENSGACG00000006447ybx110054.489ENSMLUG00000029452-10048.318Myotis_lucifugus
ENSGACG00000006447ybx17958.687ENSMLUG00000024638-10045.289Myotis_lucifugus
ENSGACG00000006447ybx110088.852ENSNBRG00000003194ybx110088.852Neolamprologus_brichardi
ENSGACG00000006447ybx19955.589ENSNLEG00000006575-9647.619Nomascus_leucogenys
ENSGACG00000006447ybx110060.641ENSNLEG00000012324YBX110055.331Nomascus_leucogenys
ENSGACG00000006447ybx18860.976ENSOPRG00000008050YBX19954.296Ochotona_princeps
ENSGACG00000006447ybx110052.819ENSODEG00000004098-10043.895Octodon_degus
ENSGACG00000006447ybx110054.114ENSODEG00000005696-10048.089Octodon_degus
ENSGACG00000006447ybx110055.455ENSODEG00000001517-10050.152Octodon_degus
ENSGACG00000006447ybx19854.601ENSODEG00000007841-9549.849Octodon_degus
ENSGACG00000006447ybx110048.810ENSODEG00000005030-6057.075Octodon_degus
ENSGACG00000006447ybx110089.180ENSONIG00000002062ybx110089.180Oreochromis_niloticus
ENSGACG00000006447ybx18960.577ENSOANG00000011725YBX19852.848Ornithorhynchus_anatinus
ENSGACG00000006447ybx18262.172ENSOCUG00000028047-10054.982Oryctolagus_cuniculus
ENSGACG00000006447ybx17960.232ENSOCUG00000024588-8452.852Oryctolagus_cuniculus
ENSGACG00000006447ybx17958.015ENSOCUG00000021258-8351.321Oryctolagus_cuniculus
ENSGACG00000006447ybx110053.106ENSOCUG00000026608-10048.171Oryctolagus_cuniculus
ENSGACG00000006447ybx110085.806ENSORLG00000004225ybx110085.484Oryzias_latipes
ENSGACG00000006447ybx110085.806ENSORLG00020016155ybx110085.484Oryzias_latipes_hni
ENSGACG00000006447ybx110085.484ENSORLG00015008023ybx110085.161Oryzias_latipes_hsok
ENSGACG00000006447ybx110086.731ENSOMEG00000004798ybx110086.408Oryzias_melastigma
ENSGACG00000006447ybx19253.979ENSOGAG00000030653-9547.872Otolemur_garnettii
ENSGACG00000006447ybx17660.084ENSOGAG00000032929-5180.165Otolemur_garnettii
ENSGACG00000006447ybx18842.321ENSOGAG00000024681-6043.689Otolemur_garnettii
ENSGACG00000006447ybx19256.610ENSOGAG00000014939-8551.678Otolemur_garnettii
ENSGACG00000006447ybx18864.931ENSOARG00000020447YBX17958.219Ovis_aries
ENSGACG00000006447ybx19944.444ENSPPAG00000032491-9538.650Pan_paniscus
ENSGACG00000006447ybx110057.910ENSPPAG00000028526-10050.292Pan_paniscus
ENSGACG00000006447ybx110060.641ENSPPAG00000030580-10055.331Pan_paniscus
ENSGACG00000006447ybx110060.641ENSPPRG00000014539-10055.331Panthera_pardus
ENSGACG00000006447ybx18864.460ENSPTIG00000011422YBX18357.732Panthera_tigris_altaica
ENSGACG00000006447ybx19560.645ENSPTRG00000047244-9257.627Pan_troglodytes
ENSGACG00000006447ybx19262.207ENSPTRG00000046217-10050.852Pan_troglodytes
ENSGACG00000006447ybx17662.651ENSPTRG00000006456-6263.594Pan_troglodytes
ENSGACG00000006447ybx110059.215ENSPTRG00000045241-10055.015Pan_troglodytes
ENSGACG00000006447ybx110058.507ENSPTRG00000043077-10050.000Pan_troglodytes
ENSGACG00000006447ybx19262.207ENSPTRG00000052534-10050.852Pan_troglodytes
ENSGACG00000006447ybx110060.641ENSPANG00000013156-10055.331Papio_anubis
ENSGACG00000006447ybx19247.387ENSPANG00000007698-10041.716Papio_anubis
ENSGACG00000006447ybx19264.667ENSPANG00000016576-9558.923Papio_anubis
ENSGACG00000006447ybx19161.356ENSPANG00000005177-5071.515Papio_anubis
ENSGACG00000006447ybx110063.253ENSPKIG00000013063ybx18358.929Paramormyrops_kingsleyae
ENSGACG00000006447ybx110063.881ENSPKIG00000012488ybx18162.537Paramormyrops_kingsleyae
ENSGACG00000006447ybx18862.543ENSPSIG00000011017-10057.534Pelodiscus_sinensis
ENSGACG00000006447ybx18945.055ENSPSIG00000009540-5761.654Pelodiscus_sinensis
ENSGACG00000006447ybx110075.455ENSPMGG00000007209ybx19788.636Periophthalmus_magnuspinnatus
ENSGACG00000006447ybx19554.341ENSPEMG00000011569-8849.832Peromyscus_maniculatus_bairdii
ENSGACG00000006447ybx110053.936ENSPCIG00000009151YBX110048.991Phascolarctos_cinereus
ENSGACG00000006447ybx110076.161ENSPFOG00000011441ybx110080.122Poecilia_formosa
ENSGACG00000006447ybx110087.379ENSPLAG00000017662ybx110087.055Poecilia_latipinna
ENSGACG00000006447ybx110087.379ENSPMEG00000015332ybx110087.055Poecilia_mexicana
ENSGACG00000006447ybx110089.180ENSPREG00000017082ybx110089.180Poecilia_reticulata
ENSGACG00000006447ybx110057.143ENSPPYG00000001466YBX110051.873Pongo_abelii
ENSGACG00000006447ybx110054.227ENSPCAG00000008397YBX110048.286Procavia_capensis
ENSGACG00000006447ybx110055.357ENSPCOG00000025273-10052.616Propithecus_coquereli
ENSGACG00000006447ybx19262.081ENSPCOG00000025488-8953.667Propithecus_coquereli
ENSGACG00000006447ybx19459.532ENSPCOG00000025486-9056.849Propithecus_coquereli
ENSGACG00000006447ybx110049.536ENSPCOG00000019145-10042.988Propithecus_coquereli
ENSGACG00000006447ybx110060.423ENSPCOG00000021167-10056.973Propithecus_coquereli
ENSGACG00000006447ybx19159.150ENSPCOG00000022604-8352.492Propithecus_coquereli
ENSGACG00000006447ybx110054.094ENSPCOG00000023362-10051.156Propithecus_coquereli
ENSGACG00000006447ybx19557.000ENSPCOG00000022587-8953.979Propithecus_coquereli
ENSGACG00000006447ybx19064.726ENSPCOG00000009057-9758.108Propithecus_coquereli
ENSGACG00000006447ybx110059.184ENSPVAG00000005504YBX110053.890Pteropus_vampyrus
ENSGACG00000006447ybx110088.852ENSPNYG00000010076ybx110088.852Pundamilia_nyererei
ENSGACG00000006447ybx110073.926ENSPNAG00000028799ybx110072.866Pygocentrus_nattereri
ENSGACG00000006447ybx19263.333ENSRNOG00000032902Ybx1-ps310054.493Rattus_norvegicus
ENSGACG00000006447ybx19265.789ENSRNOG00000023786Ybx110054.728Rattus_norvegicus
ENSGACG00000006447ybx19362.791ENSRBIG00000029840-9657.576Rhinopithecus_bieti
ENSGACG00000006447ybx110061.610ENSRBIG00000035792-10055.657Rhinopithecus_bieti
ENSGACG00000006447ybx19362.791ENSRROG00000034332-9657.239Rhinopithecus_roxellana
ENSGACG00000006447ybx19962.500ENSRROG00000006964-10055.000Rhinopithecus_roxellana
ENSGACG00000006447ybx18864.808ENSRROG00000032663YBX18358.076Rhinopithecus_roxellana
ENSGACG00000006447ybx19257.840ENSSBOG00000027517-5568.485Saimiri_boliviensis_boliviensis
ENSGACG00000006447ybx110057.798ENSSBOG00000027723-10053.333Saimiri_boliviensis_boliviensis
ENSGACG00000006447ybx19363.245ENSSBOG00000028808-7258.219Saimiri_boliviensis_boliviensis
ENSGACG00000006447ybx18963.793ENSSHAG00000014452YBX19157.483Sarcophilus_harrisii
ENSGACG00000006447ybx110063.914ENSSFOG00015008173ybx110070.695Scleropages_formosus
ENSGACG00000006447ybx110088.925ENSSMAG00000011351ybx110089.577Scophthalmus_maximus
ENSGACG00000006447ybx110089.216ENSSDUG00000020859ybx110089.869Seriola_dumerili
ENSGACG00000006447ybx110089.216ENSSLDG00000024354ybx110089.869Seriola_lalandi_dorsalis
ENSGACG00000006447ybx19955.346ENSSARG00000012628-9051.084Sorex_araneus
ENSGACG00000006447ybx18162.030ENSSARG00000007896-7654.815Sorex_araneus
ENSGACG00000006447ybx19262.136ENSSPUG00000009200YBX18356.436Sphenodon_punctatus
ENSGACG00000006447ybx110083.030ENSSPAG00000020399ybx110095.833Stegastes_partitus
ENSGACG00000006447ybx19264.667ENSSSCG00000028485-8952.896Sus_scrofa
ENSGACG00000006447ybx110058.065ENSTGUG00000017262YBX110055.394Taeniopygia_guttata
ENSGACG00000006447ybx110082.410ENSTRUG00000024170ybx110080.782Takifugu_rubripes
ENSGACG00000006447ybx110084.691ENSTNIG00000011989ybx110080.456Tetraodon_nigroviridis
ENSGACG00000006447ybx15260.355ENSTBEG00000015642-8050.000Tupaia_belangeri
ENSGACG00000006447ybx110056.647ENSTTRG00000001353-10050.571Tursiops_truncatus
ENSGACG00000006447ybx110053.936ENSUAMG00000015447YBX110048.415Ursus_americanus
ENSGACG00000006447ybx18861.888ENSVPAG00000000068-5373.750Vicugna_pacos
ENSGACG00000006447ybx110061.963ENSXETG00000013436ybx110055.015Xenopus_tropicalis
ENSGACG00000006447ybx110076.721ENSXCOG00000003395ybx110095.652Xiphophorus_couchianus
ENSGACG00000006447ybx110087.379ENSXMAG00000018674ybx110087.055Xiphophorus_maculatus

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