EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000006636 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 5928 bases
Position: chrgroupXVIII:4780893-4786820
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000008784	RNase_Zc3h12a	PF11977.8	1.7e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000008803	-	939	-	ENSGACP00000008784	313 (aa)	-	G3NTW6

Gene Model

Click here to download ENSGACG00000006636's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000006636's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000006636	-	90	54.576	ENSGACG00000002341	si:dkey-206d17.12	54	54.576
ENSGACG00000006636	-	89	57.639	ENSGACG00000013859	zc3h12a	50	57.639

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000006636	-	91	59.000	ENSG00000163874	ZC3H12A	80	58.952	Homo_sapiens
ENSGACG00000006636	-	90	60.854	ENSAPOG00000001632	-	57	60.854	Acanthochromis_polyacanthus
ENSGACG00000006636	-	99	87.898	ENSAPOG00000005848	-	52	87.898	Acanthochromis_polyacanthus
ENSGACG00000006636	-	99	84.713	ENSACIG00000006790	-	92	74.658	Amphilophus_citrinellus
ENSGACG00000006636	-	89	55.932	ENSACIG00000004135	si:dkey-206d17.12	80	52.609	Amphilophus_citrinellus
ENSGACG00000006636	-	99	87.580	ENSAOCG00000009106	-	52	87.580	Amphiprion_ocellaris
ENSGACG00000006636	-	90	58.784	ENSAOCG00000003866	-	86	56.277	Amphiprion_ocellaris
ENSGACG00000006636	-	70	53.333	ENSAOCG00000014326	-	87	53.333	Amphiprion_ocellaris
ENSGACG00000006636	-	69	53.846	ENSAOCG00000001288	-	85	55.172	Amphiprion_ocellaris
ENSGACG00000006636	-	70	53.333	ENSAPEG00000021795	si:dkey-206d17.12	87	53.333	Amphiprion_percula
ENSGACG00000006636	-	90	58.784	ENSAPEG00000005727	-	93	46.667	Amphiprion_percula
ENSGACG00000006636	-	99	87.580	ENSAPEG00000004229	-	52	87.580	Amphiprion_percula
ENSGACG00000006636	-	69	54.274	ENSAPEG00000022263	-	85	55.603	Amphiprion_percula
ENSGACG00000006636	-	99	83.648	ENSATEG00000013053	-	81	85.973	Anabas_testudineus
ENSGACG00000006636	-	90	57.667	ENSATEG00000002260	-	83	55.932	Anabas_testudineus
ENSGACG00000006636	-	90	55.932	ENSATEG00000006140	si:dkey-206d17.12	86	41.060	Anabas_testudineus
ENSGACG00000006636	-	91	60.884	ENSANAG00000009908	ZC3H12A	80	59.031	Aotus_nancymaae
ENSGACG00000006636	-	99	84.395	ENSACLG00000018534	-	52	84.395	Astatotilapia_calliptera
ENSGACG00000006636	-	89	71.237	ENSAMXG00000030754	-	53	71.237	Astyanax_mexicanus
ENSGACG00000006636	-	69	53.982	ENSAMXG00000029641	si:dkey-206d17.12	75	53.982	Astyanax_mexicanus
ENSGACG00000006636	-	89	61.301	ENSBTAG00000011316	ZC3H12A	50	61.301	Bos_taurus
ENSGACG00000006636	-	91	59.727	ENSCAFG00000003304	ZC3H12A	51	60.204	Canis_familiaris
ENSGACG00000006636	-	91	59.727	ENSCAFG00020008620	ZC3H12A	51	60.204	Canis_lupus_dingo
ENSGACG00000006636	-	89	60.959	ENSCHIG00000021957	ZC3H12A	50	60.959	Capra_hircus
ENSGACG00000006636	-	95	59.744	ENSCAPG00000015365	ZC3H12A	57	59.744	Cavia_aperea
ENSGACG00000006636	-	95	59.425	ENSCPOG00000011081	ZC3H12A	57	59.425	Cavia_porcellus
ENSGACG00000006636	-	91	60.473	ENSCATG00000037700	ZC3H12A	80	58.515	Cercocebus_atys
ENSGACG00000006636	-	91	60.135	ENSCANG00000042287	ZC3H12A	80	58.079	Colobus_angolensis_palliatus
ENSGACG00000006636	-	97	54.938	ENSCSEG00000010073	-	89	45.912	Cynoglossus_semilaevis
ENSGACG00000006636	-	98	81.613	ENSCVAG00000001077	-	82	86.425	Cyprinodon_variegatus
ENSGACG00000006636	-	69	56.769	ENSCVAG00000016808	-	87	58.407	Cyprinodon_variegatus
ENSGACG00000006636	-	91	58.276	ENSDARG00000005271	zc3h12a	78	61.754	Danio_rerio
ENSGACG00000006636	-	98	56.832	ENSDNOG00000035006	ZC3H12A	53	57.862	Dasypus_novemcinctus
ENSGACG00000006636	-	99	45.312	ENSETEG00000018311	ZC3H12A	64	45.597	Echinops_telfairi
ENSGACG00000006636	-	89	60.554	ENSEASG00005012220	ZC3H12A	50	60.554	Equus_asinus_asinus
ENSGACG00000006636	-	81	61.977	ENSEEUG00000005907	ZC3H12A	52	62.500	Erinaceus_europaeus
ENSGACG00000006636	-	91	54.545	ENSFHEG00000001174	si:dkey-206d17.12	50	54.545	Fundulus_heteroclitus
ENSGACG00000006636	-	94	57.980	ENSFHEG00000021225	-	82	47.333	Fundulus_heteroclitus
ENSGACG00000006636	-	99	77.460	ENSFHEG00000011425	-	56	77.460	Fundulus_heteroclitus
ENSGACG00000006636	-	92	53.793	ENSGMOG00000017603	si:dkey-206d17.12	60	53.793	Gadus_morhua
ENSGACG00000006636	-	94	53.311	ENSGMOG00000007388	-	55	53.642	Gadus_morhua
ENSGACG00000006636	-	99	61.736	ENSGMOG00000014437	-	99	61.736	Gadus_morhua
ENSGACG00000006636	-	99	80.818	ENSGAFG00000009523	-	56	80.818	Gambusia_affinis
ENSGACG00000006636	-	92	53.199	ENSGAFG00000019001	si:dkey-206d17.12	54	53.199	Gambusia_affinis
ENSGACG00000006636	-	99	84.395	ENSHBUG00000021584	-	85	84.163	Haplochromis_burtoni
ENSGACG00000006636	-	96	51.118	ENSHCOG00000004255	si:dkey-206d17.12	91	49.138	Hippocampus_comes
ENSGACG00000006636	-	91	59.790	ENSHCOG00000008878	-	58	46.452	Hippocampus_comes
ENSGACG00000006636	-	91	73.427	ENSIPUG00000011663	-	53	73.427	Ictalurus_punctatus
ENSGACG00000006636	-	69	52.511	ENSKMAG00000002156	ZC3H12A	83	52.511	Kryptolebias_marmoratus
ENSGACG00000006636	-	69	55.603	ENSKMAG00000013285	-	86	56.957	Kryptolebias_marmoratus
ENSGACG00000006636	-	99	82.857	ENSKMAG00000014401	-	60	82.857	Kryptolebias_marmoratus
ENSGACG00000006636	-	90	59.259	ENSLBEG00000012554	-	87	46.452	Labrus_bergylta
ENSGACG00000006636	-	99	78.571	ENSLBEG00000012121	-	92	60.248	Labrus_bergylta
ENSGACG00000006636	-	96	71.382	ENSLOCG00000017000	-	59	71.617	Lepisosteus_oculatus
ENSGACG00000006636	-	91	60.473	ENSMFAG00000032647	ZC3H12A	80	58.515	Macaca_fascicularis
ENSGACG00000006636	-	91	60.473	ENSMNEG00000040453	ZC3H12A	80	58.515	Macaca_nemestrina
ENSGACG00000006636	-	91	60.473	ENSMLEG00000034570	ZC3H12A	80	58.515	Mandrillus_leucophaeus
ENSGACG00000006636	-	89	56.954	ENSMAMG00000021794	-	96	46.795	Mastacembelus_armatus
ENSGACG00000006636	-	94	86.195	ENSMAMG00000004463	-	84	84.615	Mastacembelus_armatus
ENSGACG00000006636	-	91	57.627	ENSMZEG00005019137	-	92	45.912	Maylandia_zebra
ENSGACG00000006636	-	99	84.395	ENSMZEG00005015555	-	52	84.395	Maylandia_zebra
ENSGACG00000006636	-	69	52.609	ENSMZEG00005023410	ZC3H12A	78	52.609	Maylandia_zebra
ENSGACG00000006636	-	91	60.943	ENSMGAG00000003371	ZC3H12A	51	60.943	Meleagris_gallopavo
ENSGACG00000006636	-	96	52.548	ENSMMOG00000013604	si:dkey-206d17.12	55	52.548	Mola_mola
ENSGACG00000006636	-	90	58.725	ENSMMOG00000005728	-	86	46.000	Mola_mola
ENSGACG00000006636	-	94	82.550	ENSMMOG00000014855	-	86	80.631	Mola_mola
ENSGACG00000006636	-	89	58.076	ENSMMOG00000000727	zc3h12a	84	44.218	Mola_mola
ENSGACG00000006636	-	99	59.133	ENSMODG00000017794	ZC3H12A	50	59.502	Monodelphis_domestica
ENSGACG00000006636	-	99	83.591	ENSMALG00000018908	-	58	83.591	Monopterus_albus
ENSGACG00000006636	-	89	61.986	MGP_SPRETEiJ_G0027441	Zc3h12a	83	58.974	Mus_spretus
ENSGACG00000006636	-	91	60.606	ENSMPUG00000014758	ZC3H12A	51	60.606	Mustela_putorius_furo
ENSGACG00000006636	-	90	54.983	ENSNBRG00000012175	-	92	46.835	Neolamprologus_brichardi
ENSGACG00000006636	-	99	85.577	ENSNBRG00000010961	-	83	86.111	Neolamprologus_brichardi
ENSGACG00000006636	-	96	40.909	ENSMEUG00000003389	ZC3H12A	55	40.909	Notamacropus_eugenii
ENSGACG00000006636	-	89	61.224	ENSODEG00000005643	ZC3H12A	52	58.991	Octodon_degus
ENSGACG00000006636	-	89	57.288	ENSONIG00000016235	zc3h12a	52	57.288	Oreochromis_niloticus
ENSGACG00000006636	-	90	55.705	ENSONIG00000013685	si:dkey-206d17.12	53	55.892	Oreochromis_niloticus
ENSGACG00000006636	-	95	60.191	ENSOANG00000002060	ZC3H12A	52	60.191	Ornithorhynchus_anatinus
ENSGACG00000006636	-	96	59.365	ENSOCUG00000010856	ZC3H12A	80	59.365	Oryctolagus_cuniculus
ENSGACG00000006636	-	69	55.507	ENSORLG00000009473	ZC3H12A	84	55.507	Oryzias_latipes
ENSGACG00000006636	-	99	80.635	ENSORLG00000015280	-	58	80.635	Oryzias_latipes
ENSGACG00000006636	-	94	57.190	ENSORLG00020016107	-	53	57.190	Oryzias_latipes_hni
ENSGACG00000006636	-	99	80.192	ENSORLG00020008580	-	51	80.317	Oryzias_latipes_hni
ENSGACG00000006636	-	94	57.516	ENSORLG00015007634	ZC3H12A	53	57.516	Oryzias_latipes_hsok
ENSGACG00000006636	-	99	80.511	ENSORLG00015003680	-	51	80.635	Oryzias_latipes_hsok
ENSGACG00000006636	-	94	57.468	ENSOMEG00000005602	si:dkey-206d17.12	52	57.468	Oryzias_melastigma
ENSGACG00000006636	-	94	84.459	ENSOMEG00000011669	-	58	81.587	Oryzias_melastigma
ENSGACG00000006636	-	90	60.204	ENSOARG00000019760	ZC3H12A	67	60.204	Ovis_aries
ENSGACG00000006636	-	91	59.333	ENSPPAG00000041054	ZC3H12A	80	59.389	Pan_paniscus
ENSGACG00000006636	-	91	60.135	ENSPTIG00000012943	ZC3H12A	81	58.009	Panthera_tigris_altaica
ENSGACG00000006636	-	91	59.333	ENSPTRG00000000544	ZC3H12A	80	59.389	Pan_troglodytes
ENSGACG00000006636	-	91	60.473	ENSPANG00000011821	ZC3H12A	80	58.515	Papio_anubis
ENSGACG00000006636	-	91	71.972	ENSPKIG00000019720	-	74	69.778	Paramormyrops_kingsleyae
ENSGACG00000006636	-	94	60.656	ENSPSIG00000009198	ZC3H12A	53	60.656	Pelodiscus_sinensis
ENSGACG00000006636	-	98	53.605	ENSPMGG00000004114	zc3h12a	56	53.605	Periophthalmus_magnuspinnatus
ENSGACG00000006636	-	91	55.442	ENSPMGG00000009790	-	53	56.081	Periophthalmus_magnuspinnatus
ENSGACG00000006636	-	99	81.013	ENSPFOG00000004135	-	56	81.013	Poecilia_formosa
ENSGACG00000006636	-	99	80.892	ENSPLAG00000001211	-	56	80.892	Poecilia_latipinna
ENSGACG00000006636	-	88	55.282	ENSPMEG00000011188	si:dkey-206d17.12	53	54.828	Poecilia_mexicana
ENSGACG00000006636	-	70	84.305	ENSPMEG00000009279	-	89	84.305	Poecilia_mexicana
ENSGACG00000006636	-	99	80.952	ENSPREG00000020369	-	53	80.952	Poecilia_reticulata
ENSGACG00000006636	-	90	59.184	ENSPREG00000001607	-	73	57.333	Poecilia_reticulata
ENSGACG00000006636	-	99	84.395	ENSPNYG00000010663	-	52	84.395	Pundamilia_nyererei
ENSGACG00000006636	-	90	70.764	ENSPNAG00000012124	-	52	70.764	Pygocentrus_nattereri
ENSGACG00000006636	-	91	60.473	ENSRBIG00000042237	ZC3H12A	52	60.473	Rhinopithecus_bieti
ENSGACG00000006636	-	91	60.473	ENSRROG00000037444	ZC3H12A	80	58.515	Rhinopithecus_roxellana
ENSGACG00000006636	-	73	65.546	ENSSFOG00015005925	zc3h12a	57	62.209	Scleropages_formosus
ENSGACG00000006636	-	94	56.962	ENSSMAG00000005140	zc3h12a	51	56.962	Scophthalmus_maximus
ENSGACG00000006636	-	99	83.901	ENSSMAG00000017632	-	56	83.901	Scophthalmus_maximus
ENSGACG00000006636	-	100	84.424	ENSSDUG00000010581	-	90	82.482	Seriola_dumerili
ENSGACG00000006636	-	66	70.874	ENSSDUG00000013237	-	89	49.645	Seriola_dumerili
ENSGACG00000006636	-	100	84.424	ENSSLDG00000022022	-	54	84.424	Seriola_lalandi_dorsalis
ENSGACG00000006636	-	68	53.509	ENSSLDG00000009317	si:dkey-206d17.12	83	53.509	Seriola_lalandi_dorsalis
ENSGACG00000006636	-	92	57.191	ENSSPAG00000020938	si:dkey-206d17.12	53	57.191	Stegastes_partitus
ENSGACG00000006636	-	99	86.624	ENSSPAG00000022537	-	52	86.624	Stegastes_partitus
ENSGACG00000006636	-	95	58.900	ENSSSCG00000037815	ZC3H12A	52	59.283	Sus_scrofa
ENSGACG00000006636	-	92	52.492	ENSTRUG00000010565	si:dkey-206d17.12	51	52.492	Takifugu_rubripes
ENSGACG00000006636	-	91	55.479	ENSTNIG00000001274	si:dkey-206d17.12	55	55.743	Tetraodon_nigroviridis
ENSGACG00000006636	-	66	69.903	ENSTNIG00000014519	-	87	55.459	Tetraodon_nigroviridis
ENSGACG00000006636	-	98	58.176	ENSTTRG00000008591	ZC3H12A	52	58.176	Tursiops_truncatus
ENSGACG00000006636	-	91	60.473	ENSUMAG00000001122	ZC3H12A	51	60.943	Ursus_maritimus
ENSGACG00000006636	-	91	60.204	ENSVVUG00000023171	ZC3H12A	51	60.204	Vulpes_vulpes
ENSGACG00000006636	-	96	58.252	ENSXETG00000011465	zc3h12a	55	58.252	Xenopus_tropicalis
ENSGACG00000006636	-	99	81.329	ENSXCOG00000001538	-	89	81.818	Xiphophorus_couchianus
ENSGACG00000006636	-	89	57.338	ENSXCOG00000008984	zc3h12a	87	47.183	Xiphophorus_couchianus
ENSGACG00000006636	-	90	58.844	ENSXMAG00000014715	-	83	57.269	Xiphophorus_maculatus
ENSGACG00000006636	-	99	81.329	ENSXMAG00000005023	-	89	81.818	Xiphophorus_maculatus
ENSGACG00000006636	-	92	53.821	ENSXMAG00000025043	si:dkey-206d17.12	54	53.821	Xiphophorus_maculatus