EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000006645 (Gene tree)
Gene ID: -
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TAR (HIV) RNA binding protein 2
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3807 bases
Position: chrgroupXVII:5508244-5512050
Accession: ZDB-GENE-030131-8085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000008804	dsrm	PF00035.26	2.7e-34	1	2
ENSGACP00000008804	dsrm	PF00035.26	2.7e-34	2	2
ENSGACP00000008804	DND1_DSRM	PF14709.7	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000008823	-	1194	-	ENSGACP00000008804	355 (aa)	-	G3NTY6

Gene Model

Click here to download ENSGACG00000006645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000006645's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000006645	tarbp2	93	42.424	ENSGACG00000004394	prkra	92	41.212

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000006645	tarbp2	100	63.369	ENSG00000139546	TARBP2	100	65.230	Homo_sapiens
ENSGACG00000006645	tarbp2	100	90.141	ENSAPOG00000019892	tarbp2	100	90.704	Acanthochromis_polyacanthus
ENSGACG00000006645	tarbp2	100	64.946	ENSAMEG00000012601	TARBP2	100	64.228	Ailuropoda_melanoleuca
ENSGACG00000006645	tarbp2	100	86.479	ENSACIG00000016780	tarbp2	100	84.123	Amphilophus_citrinellus
ENSGACG00000006645	tarbp2	100	90.141	ENSAOCG00000005201	tarbp2	100	90.704	Amphiprion_ocellaris
ENSGACG00000006645	tarbp2	100	90.141	ENSAPEG00000008376	tarbp2	100	90.704	Amphiprion_percula
ENSGACG00000006645	tarbp2	100	89.859	ENSATEG00000025012	tarbp2	100	90.986	Anabas_testudineus
ENSGACG00000006645	tarbp2	100	68.033	ENSACAG00000001100	TARBP2	100	67.857	Anolis_carolinensis
ENSGACG00000006645	tarbp2	100	64.402	ENSANAG00000034453	TARBP2	94	75.676	Aotus_nancymaae
ENSGACG00000006645	tarbp2	95	86.686	ENSACLG00000018569	tarbp2	95	87.870	Astatotilapia_calliptera
ENSGACG00000006645	tarbp2	100	81.127	ENSAMXG00000016665	tarbp2	100	80.845	Astyanax_mexicanus
ENSGACG00000006645	tarbp2	100	65.217	ENSBTAG00000000435	TARBP2	100	64.499	Bos_taurus
ENSGACG00000006645	tarbp2	100	64.674	ENSCJAG00000018668	TARBP2	100	63.957	Callithrix_jacchus
ENSGACG00000006645	tarbp2	100	66.667	ENSCAFG00000006874	TARBP2	100	63.305	Canis_familiaris
ENSGACG00000006645	tarbp2	100	63.904	ENSCAFG00020020735	TARBP2	100	65.517	Canis_lupus_dingo
ENSGACG00000006645	tarbp2	100	63.564	ENSCHIG00000026017	TARBP2	61	70.044	Capra_hircus
ENSGACG00000006645	tarbp2	100	65.217	ENSTSYG00000035683	TARBP2	94	75.676	Carlito_syrichta
ENSGACG00000006645	tarbp2	63	69.604	ENSCAPG00000008981	TARBP2	100	69.604	Cavia_aperea
ENSGACG00000006645	tarbp2	100	65.135	ENSCPOG00000001009	TARBP2	100	63.859	Cavia_porcellus
ENSGACG00000006645	tarbp2	97	65.922	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSGACG00000006645	tarbp2	100	63.102	ENSCATG00000026344	TARBP2	94	75.676	Cercocebus_atys
ENSGACG00000006645	tarbp2	100	63.904	ENSCLAG00000009175	TARBP2	100	63.415	Chinchilla_lanigera
ENSGACG00000006645	tarbp2	100	63.102	ENSCSAG00000005479	TARBP2	100	63.144	Chlorocebus_sabaeus
ENSGACG00000006645	tarbp2	100	67.945	ENSCPBG00000000654	TARBP2	100	69.883	Chrysemys_picta_bellii
ENSGACG00000006645	tarbp2	100	63.102	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSGACG00000006645	tarbp2	100	63.102	ENSCGRG00001011856	TARBP2	100	63.215	Cricetulus_griseus_chok1gshd
ENSGACG00000006645	tarbp2	100	63.102	ENSCGRG00000009088	TARBP2	100	63.673	Cricetulus_griseus_crigri
ENSGACG00000006645	tarbp2	100	86.479	ENSCSEG00000010631	tarbp2	100	87.042	Cynoglossus_semilaevis
ENSGACG00000006645	tarbp2	100	87.042	ENSCVAG00000009832	tarbp2	100	86.761	Cyprinodon_variegatus
ENSGACG00000006645	tarbp2	100	78.431	ENSDARG00000070471	tarbp2	100	78.431	Danio_rerio
ENSGACG00000006645	tarbp2	100	65.489	ENSDNOG00000002144	TARBP2	100	64.674	Dasypus_novemcinctus
ENSGACG00000006645	tarbp2	62	69.955	ENSDORG00000001390	Tarbp2	91	69.955	Dipodomys_ordii
ENSGACG00000006645	tarbp2	84	79.592	ENSETEG00000002458	TARBP2	77	77.215	Echinops_telfairi
ENSGACG00000006645	tarbp2	95	55.621	ENSEBUG00000002377	tarbp2	98	55.325	Eptatretus_burgeri
ENSGACG00000006645	tarbp2	100	63.757	ENSEASG00005010030	TARBP2	100	63.957	Equus_asinus_asinus
ENSGACG00000006645	tarbp2	100	66.387	ENSECAG00000011695	TARBP2	94	75.676	Equus_caballus
ENSGACG00000006645	tarbp2	85	61.783	ENSEEUG00000001128	-	78	75.949	Erinaceus_europaeus
ENSGACG00000006645	tarbp2	100	81.513	ENSELUG00000010642	tarbp2	100	82.353	Esox_lucius
ENSGACG00000006645	tarbp2	100	64.946	ENSFCAG00000007757	TARBP2	100	64.228	Felis_catus
ENSGACG00000006645	tarbp2	100	63.588	ENSFDAG00000011932	TARBP2	100	64.777	Fukomys_damarensis
ENSGACG00000006645	tarbp2	94	88.024	ENSFHEG00000016118	tarbp2	100	87.425	Fundulus_heteroclitus
ENSGACG00000006645	tarbp2	100	83.944	ENSGMOG00000001290	tarbp2	100	84.225	Gadus_morhua
ENSGACG00000006645	tarbp2	62	71.946	ENSGALG00000038939	-	83	71.946	Gallus_gallus
ENSGACG00000006645	tarbp2	100	86.761	ENSGAFG00000013341	tarbp2	100	86.479	Gambusia_affinis
ENSGACG00000006645	tarbp2	100	67.945	ENSGAGG00000021169	TARBP2	100	67.769	Gopherus_agassizii
ENSGACG00000006645	tarbp2	97	64.835	ENSGGOG00000012637	TARBP2	81	85.938	Gorilla_gorilla
ENSGACG00000006645	tarbp2	100	87.042	ENSHBUG00000018639	tarbp2	100	88.169	Haplochromis_burtoni
ENSGACG00000006645	tarbp2	100	64.865	ENSHGLG00000001284	TARBP2	100	63.957	Heterocephalus_glaber_female
ENSGACG00000006645	tarbp2	100	64.865	ENSHGLG00100011274	TARBP2	100	63.957	Heterocephalus_glaber_male
ENSGACG00000006645	tarbp2	100	83.473	ENSHCOG00000001027	tarbp2	100	82.254	Hippocampus_comes
ENSGACG00000006645	tarbp2	100	79.330	ENSIPUG00000023701	tarbp2	100	79.050	Ictalurus_punctatus
ENSGACG00000006645	tarbp2	97	67.318	ENSSTOG00000003678	TARBP2	100	65.041	Ictidomys_tridecemlineatus
ENSGACG00000006645	tarbp2	100	89.014	ENSKMAG00000012142	tarbp2	100	88.732	Kryptolebias_marmoratus
ENSGACG00000006645	tarbp2	100	88.858	ENSLBEG00000015027	tarbp2	100	88.187	Labrus_bergylta
ENSGACG00000006645	tarbp2	73	91.228	ENSLACG00000007087	TARBP2	76	91.228	Latimeria_chalumnae
ENSGACG00000006645	tarbp2	100	78.310	ENSLOCG00000005711	tarbp2	100	77.465	Lepisosteus_oculatus
ENSGACG00000006645	tarbp2	73	61.852	ENSLAFG00000002620	TARBP2	95	61.481	Loxodonta_africana
ENSGACG00000006645	tarbp2	100	63.102	ENSMFAG00000013567	TARBP2	94	75.676	Macaca_fascicularis
ENSGACG00000006645	tarbp2	100	63.369	ENSMMUG00000018492	TARBP2	100	63.415	Macaca_mulatta
ENSGACG00000006645	tarbp2	100	63.102	ENSMNEG00000036477	TARBP2	94	75.676	Macaca_nemestrina
ENSGACG00000006645	tarbp2	100	63.102	ENSMLEG00000029583	TARBP2	94	75.676	Mandrillus_leucophaeus
ENSGACG00000006645	tarbp2	95	90.671	ENSMAMG00000010272	tarbp2	97	89.826	Mastacembelus_armatus
ENSGACG00000006645	tarbp2	100	87.324	ENSMZEG00005006895	tarbp2	100	88.451	Maylandia_zebra
ENSGACG00000006645	tarbp2	100	63.102	ENSMAUG00000019805	Tarbp2	100	62.943	Mesocricetus_auratus
ENSGACG00000006645	tarbp2	94	66.289	ENSMICG00000027441	TARBP2	94	75.676	Microcebus_murinus
ENSGACG00000006645	tarbp2	100	64.850	ENSMOCG00000003691	Tarbp2	100	63.488	Microtus_ochrogaster
ENSGACG00000006645	tarbp2	94	85.882	ENSMMOG00000010374	tarbp2	100	87.725	Mola_mola
ENSGACG00000006645	tarbp2	100	88.169	ENSMALG00000009773	tarbp2	100	89.577	Monopterus_albus
ENSGACG00000006645	tarbp2	100	64.578	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSGACG00000006645	tarbp2	100	64.578	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSGACG00000006645	tarbp2	100	64.033	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSGACG00000006645	tarbp2	100	64.578	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSGACG00000006645	tarbp2	100	64.595	ENSMPUG00000005944	TARBP2	100	64.033	Mustela_putorius_furo
ENSGACG00000006645	tarbp2	100	64.946	ENSMLUG00000010035	TARBP2	100	64.499	Myotis_lucifugus
ENSGACG00000006645	tarbp2	100	63.369	ENSNLEG00000017690	TARBP2	94	75.676	Nomascus_leucogenys
ENSGACG00000006645	tarbp2	100	66.479	ENSMEUG00000001916	TARBP2	100	64.225	Notamacropus_eugenii
ENSGACG00000006645	tarbp2	63	70.925	ENSOPRG00000011397	TARBP2	100	70.925	Ochotona_princeps
ENSGACG00000006645	tarbp2	61	68.103	ENSODEG00000013413	TARBP2	100	67.401	Octodon_degus
ENSGACG00000006645	tarbp2	95	82.682	ENSONIG00000005115	tarbp2	96	83.799	Oreochromis_niloticus
ENSGACG00000006645	tarbp2	100	66.307	ENSOCUG00000005700	TARBP2	100	65.041	Oryctolagus_cuniculus
ENSGACG00000006645	tarbp2	100	87.042	ENSORLG00000005209	tarbp2	100	87.324	Oryzias_latipes
ENSGACG00000006645	tarbp2	100	86.761	ENSORLG00020017755	tarbp2	100	87.042	Oryzias_latipes_hni
ENSGACG00000006645	tarbp2	100	87.042	ENSORLG00015013237	tarbp2	100	87.324	Oryzias_latipes_hsok
ENSGACG00000006645	tarbp2	100	87.887	ENSOMEG00000018860	tarbp2	100	87.606	Oryzias_melastigma
ENSGACG00000006645	tarbp2	100	62.240	ENSOGAG00000001744	TARBP2	100	63.957	Otolemur_garnettii
ENSGACG00000006645	tarbp2	100	64.946	ENSOARG00000016437	TARBP2	100	64.228	Ovis_aries
ENSGACG00000006645	tarbp2	100	63.369	ENSPPAG00000030429	TARBP2	94	75.676	Pan_paniscus
ENSGACG00000006645	tarbp2	100	64.946	ENSPPRG00000000189	TARBP2	100	64.228	Panthera_pardus
ENSGACG00000006645	tarbp2	100	66.944	ENSPTIG00000007859	TARBP2	100	66.667	Panthera_tigris_altaica
ENSGACG00000006645	tarbp2	100	63.369	ENSPTRG00000005020	TARBP2	94	75.676	Pan_troglodytes
ENSGACG00000006645	tarbp2	100	63.102	ENSPANG00000010689	TARBP2	94	75.676	Papio_anubis
ENSGACG00000006645	tarbp2	100	78.830	ENSPKIG00000002455	tarbp2	100	77.654	Paramormyrops_kingsleyae
ENSGACG00000006645	tarbp2	100	87.042	ENSPMGG00000006497	tarbp2	100	86.761	Periophthalmus_magnuspinnatus
ENSGACG00000006645	tarbp2	100	63.488	ENSPEMG00000014285	Tarbp2	100	62.398	Peromyscus_maniculatus_bairdii
ENSGACG00000006645	tarbp2	93	60.606	ENSPMAG00000000105	tarbp2	99	60.000	Petromyzon_marinus
ENSGACG00000006645	tarbp2	100	66.761	ENSPCIG00000006672	TARBP2	92	64.225	Phascolarctos_cinereus
ENSGACG00000006645	tarbp2	100	88.169	ENSPFOG00000007586	tarbp2	100	87.887	Poecilia_formosa
ENSGACG00000006645	tarbp2	100	87.606	ENSPLAG00000017659	tarbp2	100	87.324	Poecilia_latipinna
ENSGACG00000006645	tarbp2	100	88.169	ENSPMEG00000007775	tarbp2	100	87.887	Poecilia_mexicana
ENSGACG00000006645	tarbp2	100	87.606	ENSPREG00000007815	tarbp2	100	87.324	Poecilia_reticulata
ENSGACG00000006645	tarbp2	97	64.368	ENSPPYG00000004583	TARBP2	97	64.080	Pongo_abelii
ENSGACG00000006645	tarbp2	62	70.852	ENSPCAG00000005352	TARBP2	60	70.852	Procavia_capensis
ENSGACG00000006645	tarbp2	100	64.674	ENSPCOG00000013102	TARBP2	94	75.676	Propithecus_coquereli
ENSGACG00000006645	tarbp2	100	64.402	ENSPVAG00000012286	TARBP2	82	77.215	Pteropus_vampyrus
ENSGACG00000006645	tarbp2	100	87.042	ENSPNYG00000014125	tarbp2	100	88.169	Pundamilia_nyererei
ENSGACG00000006645	tarbp2	100	80.563	ENSPNAG00000011128	tarbp2	100	80.845	Pygocentrus_nattereri
ENSGACG00000006645	tarbp2	100	64.033	ENSRNOG00000042355	Tarbp2	100	62.670	Rattus_norvegicus
ENSGACG00000006645	tarbp2	100	63.859	ENSRBIG00000027150	TARBP2	94	75.676	Rhinopithecus_bieti
ENSGACG00000006645	tarbp2	100	63.859	ENSRROG00000044783	TARBP2	94	75.676	Rhinopithecus_roxellana
ENSGACG00000006645	tarbp2	100	64.402	ENSSBOG00000027305	TARBP2	94	75.676	Saimiri_boliviensis_boliviensis
ENSGACG00000006645	tarbp2	96	67.232	ENSSHAG00000007064	TARBP2	100	68.563	Sarcophilus_harrisii
ENSGACG00000006645	tarbp2	100	79.778	ENSSFOG00015010784	tarbp2	100	79.167	Scleropages_formosus
ENSGACG00000006645	tarbp2	100	86.704	ENSSMAG00000012769	tarbp2	100	88.366	Scophthalmus_maximus
ENSGACG00000006645	tarbp2	100	89.859	ENSSDUG00000018818	tarbp2	100	90.986	Seriola_dumerili
ENSGACG00000006645	tarbp2	100	90.141	ENSSLDG00000001835	tarbp2	100	91.268	Seriola_lalandi_dorsalis
ENSGACG00000006645	tarbp2	74	66.502	ENSSARG00000001010	TARBP2	73	66.502	Sorex_araneus
ENSGACG00000006645	tarbp2	66	70.130	ENSSPUG00000005895	TARBP2	73	69.620	Sphenodon_punctatus
ENSGACG00000006645	tarbp2	100	90.704	ENSSPAG00000022797	tarbp2	100	90.704	Stegastes_partitus
ENSGACG00000006645	tarbp2	100	64.171	ENSSSCG00000000276	TARBP2	100	66.092	Sus_scrofa
ENSGACG00000006645	tarbp2	72	54.380	ENSTGUG00000017031	TARBP2	70	80.328	Taeniopygia_guttata
ENSGACG00000006645	tarbp2	100	89.296	ENSTRUG00000014379	tarbp2	100	89.014	Takifugu_rubripes
ENSGACG00000006645	tarbp2	100	89.296	ENSTNIG00000007065	tarbp2	100	89.014	Tetraodon_nigroviridis
ENSGACG00000006645	tarbp2	100	65.217	ENSTTRG00000017177	TARBP2	100	64.674	Tursiops_truncatus
ENSGACG00000006645	tarbp2	100	64.439	ENSUAMG00000009011	TARBP2	100	64.499	Ursus_americanus
ENSGACG00000006645	tarbp2	100	63.904	ENSUMAG00000010461	TARBP2	100	63.957	Ursus_maritimus
ENSGACG00000006645	tarbp2	100	63.904	ENSVVUG00000028150	TARBP2	100	65.517	Vulpes_vulpes
ENSGACG00000006645	tarbp2	97	71.098	ENSXETG00000012644	tarbp2	97	68.661	Xenopus_tropicalis
ENSGACG00000006645	tarbp2	100	88.169	ENSXMAG00000017836	tarbp2	100	87.887	Xiphophorus_maculatus