EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000006878 (Gene tree)
Gene ID: -
Gene Symbol: tra2a
Alias: zgc:64175
Full Name: transformer 2 alpha homolog
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 4932 bases
Position: chrgroupX:9542617-9547548
Accession: ZDB-GENE-040426-1391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000009121	RRM_1	PF00076.22	1e-18	1	1
ENSGACP00000009130	RRM_1	PF00076.22	1e-18	1	1
ENSGACP00000009128	RRM_1	PF00076.22	1.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000009150	-	1094	-	ENSGACP00000009130	285 (aa)	-	G3NUW1
ENSGACT00000009141	-	1295	-	ENSGACP00000009121	291 (aa)	-	G3NUV2
ENSGACT00000009148	-	1603	-	ENSGACP00000009128	303 (aa)	-	G3NUV9

Gene Model

Click here to download ENSGACG00000006878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000006878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000006878	tra2a	51	69.799	ENSGACG00000010109	TRA2B	62	68.156
ENSGACG00000006878	tra2a	59	67.059	ENSGACG00000005986	-	60	63.536
ENSGACG00000006878	tra2a	50	30.675	ENSGACG00000018178	-	58	30.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000006878	tra2a	89	75.581	ENSG00000164548	TRA2A	84	83.439	Homo_sapiens
ENSGACG00000006878	tra2a	90	82.707	ENSAPOG00000017425	tra2a	90	82.707	Acanthochromis_polyacanthus
ENSGACG00000006878	tra2a	85	76.327	ENSAMEG00000003501	TRA2A	74	76.327	Ailuropoda_melanoleuca
ENSGACG00000006878	tra2a	86	78.988	ENSACIG00000001333	tra2a	91	76.265	Amphilophus_citrinellus
ENSGACG00000006878	tra2a	90	82.022	ENSAOCG00000015445	tra2a	90	82.022	Amphiprion_ocellaris
ENSGACG00000006878	tra2a	90	82.022	ENSAPEG00000018557	tra2a	90	82.022	Amphiprion_percula
ENSGACG00000006878	tra2a	90	80.000	ENSATEG00000000671	tra2a	90	79.044	Anabas_testudineus
ENSGACG00000006878	tra2a	85	71.654	ENSAPLG00000013689	TRA2A	90	73.684	Anas_platyrhynchos
ENSGACG00000006878	tra2a	89	74.031	ENSACAG00000013502	TRA2A	90	74.031	Anolis_carolinensis
ENSGACG00000006878	tra2a	51	84.247	ENSANAG00000035184	TRA2A	87	71.429	Aotus_nancymaae
ENSGACG00000006878	tra2a	90	82.222	ENSACLG00000024845	tra2a	90	82.222	Astatotilapia_calliptera
ENSGACG00000006878	tra2a	80	72.532	ENSAMXG00000005553	tra2a	100	76.923	Astyanax_mexicanus
ENSGACG00000006878	tra2a	89	75.194	ENSBTAG00000012622	TRA2A	90	75.194	Bos_taurus
ENSGACG00000006878	tra2a	94	75.185	ENSCJAG00000045802	-	96	74.419	Callithrix_jacchus
ENSGACG00000006878	tra2a	89	75.581	ENSCJAG00000001509	-	90	75.194	Callithrix_jacchus
ENSGACG00000006878	tra2a	89	75.194	ENSCAFG00000002788	TRA2A	91	75.194	Canis_familiaris
ENSGACG00000006878	tra2a	60	80.814	ENSCAFG00020002745	TRA2A	85	76.522	Canis_lupus_dingo
ENSGACG00000006878	tra2a	89	75.581	ENSTSYG00000000388	TRA2A	84	83.439	Carlito_syrichta
ENSGACG00000006878	tra2a	85	64.082	ENSCAPG00000017377	TRA2A	87	63.673	Cavia_aperea
ENSGACG00000006878	tra2a	89	75.581	ENSCPOG00000010739	TRA2A	90	75.194	Cavia_porcellus
ENSGACG00000006878	tra2a	89	75.581	ENSCCAG00000019576	TRA2A	84	83.439	Cebus_capucinus
ENSGACG00000006878	tra2a	89	75.581	ENSCATG00000041219	TRA2A	84	83.439	Cercocebus_atys
ENSGACG00000006878	tra2a	89	75.581	ENSCLAG00000007917	TRA2A	90	75.194	Chinchilla_lanigera
ENSGACG00000006878	tra2a	89	75.581	ENSCSAG00000014051	TRA2A	90	75.194	Chlorocebus_sabaeus
ENSGACG00000006878	tra2a	89	75.194	ENSCHOG00000001130	TRA2A	90	74.806	Choloepus_hoffmanni
ENSGACG00000006878	tra2a	89	71.923	ENSCPBG00000022466	TRA2A	90	73.462	Chrysemys_picta_bellii
ENSGACG00000006878	tra2a	89	75.581	ENSCANG00000031292	TRA2A	84	83.439	Colobus_angolensis_palliatus
ENSGACG00000006878	tra2a	89	76.172	ENSCGRG00001019980	Tra2a	90	76.172	Cricetulus_griseus_chok1gshd
ENSGACG00000006878	tra2a	85	77.778	ENSCGRG00000006087	Tra2a	89	77.778	Cricetulus_griseus_crigri
ENSGACG00000006878	tra2a	90	71.533	ENSCSEG00000012193	tra2a	98	76.923	Cynoglossus_semilaevis
ENSGACG00000006878	tra2a	90	70.504	ENSDARG00000007863	tra2a	99	82.178	Danio_rerio
ENSGACG00000006878	tra2a	89	74.419	ENSDNOG00000039446	TRA2A	90	75.581	Dasypus_novemcinctus
ENSGACG00000006878	tra2a	89	75.391	ENSDORG00000009361	Tra2a	90	75.391	Dipodomys_ordii
ENSGACG00000006878	tra2a	55	85.535	ENSETEG00000007250	TRA2A	63	80.874	Echinops_telfairi
ENSGACG00000006878	tra2a	89	75.194	ENSEASG00005022002	TRA2A	90	75.194	Equus_asinus_asinus
ENSGACG00000006878	tra2a	89	75.194	ENSECAG00000011508	TRA2A	90	75.194	Equus_caballus
ENSGACG00000006878	tra2a	89	75.194	ENSEEUG00000015674	TRA2A	90	75.194	Erinaceus_europaeus
ENSGACG00000006878	tra2a	80	77.824	ENSELUG00000005846	tra2a	91	69.492	Esox_lucius
ENSGACG00000006878	tra2a	89	75.194	ENSFCAG00000005361	TRA2A	90	75.194	Felis_catus
ENSGACG00000006878	tra2a	85	74.694	ENSFALG00000009605	TRA2A	89	74.286	Ficedula_albicollis
ENSGACG00000006878	tra2a	89	75.581	ENSFDAG00000004949	TRA2A	90	75.194	Fukomys_damarensis
ENSGACG00000006878	tra2a	90	74.275	ENSGMOG00000013740	tra2a	91	74.275	Gadus_morhua
ENSGACG00000006878	tra2a	90	70.412	ENSGALG00000010973	TRA2A	90	72.308	Gallus_gallus
ENSGACG00000006878	tra2a	89	71.538	ENSGAGG00000005793	TRA2A	90	73.077	Gopherus_agassizii
ENSGACG00000006878	tra2a	89	75.581	ENSGGOG00000009053	TRA2A	84	83.439	Gorilla_gorilla
ENSGACG00000006878	tra2a	90	81.481	ENSHBUG00000018234	tra2a	90	81.481	Haplochromis_burtoni
ENSGACG00000006878	tra2a	89	75.581	ENSHGLG00000012168	TRA2A	90	75.194	Heterocephalus_glaber_female
ENSGACG00000006878	tra2a	89	75.581	ENSHGLG00100014577	TRA2A	90	75.194	Heterocephalus_glaber_male
ENSGACG00000006878	tra2a	65	64.583	ENSHCOG00000006314	tra2a	80	63.750	Hippocampus_comes
ENSGACG00000006878	tra2a	67	59.694	ENSHCOG00000006320	tra2a	96	59.794	Hippocampus_comes
ENSGACG00000006878	tra2a	89	75.581	ENSSTOG00000012073	TRA2A	90	75.194	Ictidomys_tridecemlineatus
ENSGACG00000006878	tra2a	89	75.391	ENSJJAG00000022787	Tra2a	90	75.391	Jaculus_jaculus
ENSGACG00000006878	tra2a	86	78.327	ENSLBEG00000005297	tra2a	88	77.947	Labrus_bergylta
ENSGACG00000006878	tra2a	90	74.525	ENSLACG00000014765	TRA2A	90	74.525	Latimeria_chalumnae
ENSGACG00000006878	tra2a	90	79.771	ENSLOCG00000011615	-	90	80.153	Lepisosteus_oculatus
ENSGACG00000006878	tra2a	89	75.969	ENSLAFG00000006598	TRA2A	90	75.581	Loxodonta_africana
ENSGACG00000006878	tra2a	89	75.581	ENSMFAG00000043211	TRA2A	84	83.439	Macaca_fascicularis
ENSGACG00000006878	tra2a	89	75.581	ENSMMUG00000006286	TRA2A	82	84.247	Macaca_mulatta
ENSGACG00000006878	tra2a	89	75.581	ENSMNEG00000040670	TRA2A	84	83.439	Macaca_nemestrina
ENSGACG00000006878	tra2a	89	75.581	ENSMLEG00000032154	TRA2A	84	83.439	Mandrillus_leucophaeus
ENSGACG00000006878	tra2a	80	83.475	ENSMAMG00000008575	tra2a	91	83.544	Mastacembelus_armatus
ENSGACG00000006878	tra2a	90	82.222	ENSMZEG00005009142	tra2a	90	82.222	Maylandia_zebra
ENSGACG00000006878	tra2a	89	69.231	ENSMGAG00000010514	TRA2A	89	73.684	Meleagris_gallopavo
ENSGACG00000006878	tra2a	89	75.969	ENSMICG00000043639	-	84	83.439	Microcebus_murinus
ENSGACG00000006878	tra2a	100	65.035	ENSMICG00000036849	-	88	63.281	Microcebus_murinus
ENSGACG00000006878	tra2a	69	68.844	ENSMOCG00000006467	-	97	70.352	Microtus_ochrogaster
ENSGACG00000006878	tra2a	64	77.596	ENSMOCG00000010249	-	88	73.077	Microtus_ochrogaster
ENSGACG00000006878	tra2a	88	76.863	ENSMMOG00000020174	tra2a	83	76.423	Mola_mola
ENSGACG00000006878	tra2a	89	74.806	ENSMODG00000000807	TRA2A	90	74.419	Monodelphis_domestica
ENSGACG00000006878	tra2a	86	75.954	ENSMALG00000020875	tra2a	90	75.273	Monopterus_albus
ENSGACG00000006878	tra2a	89	76.172	ENSMUSG00000029817	Tra2a	90	76.172	Mus_musculus
ENSGACG00000006878	tra2a	89	76.562	MGP_PahariEiJ_G0022115	Tra2a	90	76.562	Mus_pahari
ENSGACG00000006878	tra2a	89	76.172	MGP_SPRETEiJ_G0029368	Tra2a	90	76.172	Mus_spretus
ENSGACG00000006878	tra2a	89	77.519	ENSMPUG00000013480	TRA2A	90	75.194	Mustela_putorius_furo
ENSGACG00000006878	tra2a	89	74.806	ENSMLUG00000013972	TRA2A	90	75.969	Myotis_lucifugus
ENSGACG00000006878	tra2a	89	75.391	ENSNGAG00000023805	Tra2a	90	75.391	Nannospalax_galili
ENSGACG00000006878	tra2a	55	84.615	ENSNBRG00000005992	tra2a	73	84.615	Neolamprologus_brichardi
ENSGACG00000006878	tra2a	65	60.428	ENSNLEG00000029659	-	88	63.694	Nomascus_leucogenys
ENSGACG00000006878	tra2a	89	75.581	ENSNLEG00000014794	TRA2A	84	83.439	Nomascus_leucogenys
ENSGACG00000006878	tra2a	89	73.930	ENSMEUG00000001202	TRA2A	90	73.930	Notamacropus_eugenii
ENSGACG00000006878	tra2a	89	76.744	ENSOPRG00000007606	TRA2A	90	74.031	Ochotona_princeps
ENSGACG00000006878	tra2a	89	75.581	ENSODEG00000008335	TRA2A	90	75.194	Octodon_degus
ENSGACG00000006878	tra2a	90	81.111	ENSONIG00000004503	tra2a	90	81.111	Oreochromis_niloticus
ENSGACG00000006878	tra2a	89	72.481	ENSOANG00000014202	TRA2A	90	71.705	Ornithorhynchus_anatinus
ENSGACG00000006878	tra2a	89	77.519	ENSOCUG00000024139	TRA2A	90	74.806	Oryctolagus_cuniculus
ENSGACG00000006878	tra2a	89	60.465	ENSORLG00000022191	tra2a	90	60.465	Oryzias_latipes
ENSGACG00000006878	tra2a	89	60.078	ENSORLG00020003490	tra2a	90	60.078	Oryzias_latipes_hni
ENSGACG00000006878	tra2a	89	60.078	ENSORLG00015015485	tra2a	90	60.078	Oryzias_latipes_hsok
ENSGACG00000006878	tra2a	89	63.035	ENSOMEG00000017864	tra2a	89	62.353	Oryzias_melastigma
ENSGACG00000006878	tra2a	85	77.143	ENSOGAG00000009733	TRA2A	85	76.735	Otolemur_garnettii
ENSGACG00000006878	tra2a	89	74.031	ENSOARG00000013147	TRA2A	90	75.581	Ovis_aries
ENSGACG00000006878	tra2a	89	73.047	ENSOARG00000002323	-	89	73.047	Ovis_aries
ENSGACG00000006878	tra2a	89	75.581	ENSPPAG00000034382	TRA2A	84	83.439	Pan_paniscus
ENSGACG00000006878	tra2a	89	75.194	ENSPPRG00000015216	TRA2A	90	75.194	Panthera_pardus
ENSGACG00000006878	tra2a	89	75.194	ENSPTIG00000021114	TRA2A	90	75.194	Panthera_tigris_altaica
ENSGACG00000006878	tra2a	89	75.581	ENSPTRG00000046098	-	90	75.194	Pan_troglodytes
ENSGACG00000006878	tra2a	91	75.862	ENSPTRG00000018988	TRA2A	84	83.439	Pan_troglodytes
ENSGACG00000006878	tra2a	89	75.581	ENSPANG00000014541	TRA2A	90	75.194	Papio_anubis
ENSGACG00000006878	tra2a	90	78.409	ENSPKIG00000012298	tra2a	90	78.409	Paramormyrops_kingsleyae
ENSGACG00000006878	tra2a	88	73.622	ENSPSIG00000014993	TRA2A	89	73.152	Pelodiscus_sinensis
ENSGACG00000006878	tra2a	89	75.781	ENSPEMG00000008564	-	90	75.781	Peromyscus_maniculatus_bairdii
ENSGACG00000006878	tra2a	64	62.295	ENSPMAG00000007947	tra2a	50	74.265	Petromyzon_marinus
ENSGACG00000006878	tra2a	89	74.806	ENSPCIG00000007917	TRA2A	90	74.419	Phascolarctos_cinereus
ENSGACG00000006878	tra2a	89	75.581	ENSPPYG00000017728	TRA2A	90	75.194	Pongo_abelii
ENSGACG00000006878	tra2a	89	78.682	ENSPCAG00000004148	TRA2A	91	75.969	Procavia_capensis
ENSGACG00000006878	tra2a	90	59.542	ENSPCOG00000020465	TRA2A	88	59.924	Propithecus_coquereli
ENSGACG00000006878	tra2a	89	76.357	ENSPVAG00000011298	TRA2A	90	75.969	Pteropus_vampyrus
ENSGACG00000006878	tra2a	55	86.538	ENSPNYG00000020134	tra2a	91	75.758	Pundamilia_nyererei
ENSGACG00000006878	tra2a	90	75.725	ENSPNAG00000000482	tra2a	90	76.087	Pygocentrus_nattereri
ENSGACG00000006878	tra2a	89	76.172	ENSRNOG00000009156	Tra2a	90	76.172	Rattus_norvegicus
ENSGACG00000006878	tra2a	51	78.912	ENSRBIG00000036805	TRA2A	70	88.971	Rhinopithecus_bieti
ENSGACG00000006878	tra2a	89	75.581	ENSRROG00000030758	TRA2A	84	83.439	Rhinopithecus_roxellana
ENSGACG00000006878	tra2a	89	75.581	ENSSBOG00000031562	TRA2A	84	83.439	Saimiri_boliviensis_boliviensis
ENSGACG00000006878	tra2a	88	74.510	ENSSHAG00000005727	TRA2A	88	74.118	Sarcophilus_harrisii
ENSGACG00000006878	tra2a	90	76.046	ENSSFOG00015014004	tra2a	90	79.848	Scleropages_formosus
ENSGACG00000006878	tra2a	93	79.636	ENSSMAG00000014242	tra2a	90	79.167	Scophthalmus_maximus
ENSGACG00000006878	tra2a	90	80.797	ENSSDUG00000005610	tra2a	90	81.091	Seriola_dumerili
ENSGACG00000006878	tra2a	55	83.333	ENSSLDG00000025577	tra2a	81	83.974	Seriola_lalandi_dorsalis
ENSGACG00000006878	tra2a	66	69.430	ENSSARG00000012900	TRA2A	62	72.989	Sorex_araneus
ENSGACG00000006878	tra2a	89	73.077	ENSSPUG00000006143	TRA2A	90	74.615	Sphenodon_punctatus
ENSGACG00000006878	tra2a	90	82.909	ENSSPAG00000004184	tra2a	90	81.618	Stegastes_partitus
ENSGACG00000006878	tra2a	89	75.194	ENSSSCG00000015387	TRA2A	90	75.194	Sus_scrofa
ENSGACG00000006878	tra2a	61	78.977	ENSTGUG00000002795	TRA2A	66	76.243	Taeniopygia_guttata
ENSGACG00000006878	tra2a	80	75.000	ENSTBEG00000013773	TRA2A	75	79.621	Tupaia_belangeri
ENSGACG00000006878	tra2a	89	74.806	ENSTTRG00000008922	TRA2A	90	74.806	Tursiops_truncatus
ENSGACG00000006878	tra2a	55	84.076	ENSUMAG00000001181	TRA2A	79	84.076	Ursus_maritimus
ENSGACG00000006878	tra2a	67	70.619	ENSVPAG00000001829	TRA2A	90	56.458	Vicugna_pacos
ENSGACG00000006878	tra2a	89	75.194	ENSVVUG00000001045	TRA2A	90	75.194	Vulpes_vulpes
ENSGACG00000006878	tra2a	60	77.966	ENSXETG00000007397	tra2a	90	71.103	Xenopus_tropicalis