EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000006884 (Gene tree)
Gene ID: -
Gene Symbol: tfb1m
Alias: im:7151479|zgc:153625
Full Name: transcription factor B1%2C mitochondrial
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 21714 bases
Position: chrgroupXV:3547262-3568975
Accession: ZDB-GENE-060929-1010
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000009134	RrnaAD	PF00398.20	1.2e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000009154	-	1645	-	ENSGACP00000009134	354 (aa)	-	G3NUW5

Gene Model

Click here to download ENSGACG00000006884's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000006884's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000006884	tfb1m	92	70.031	ENSG00000029639	TFB1M	95	70.031	Homo_sapiens
ENSGACG00000006884	tfb1m	100	82.633	ENSAPOG00000015493	tfb1m	100	82.633	Acanthochromis_polyacanthus
ENSGACG00000006884	tfb1m	93	67.477	ENSAMEG00000012761	TFB1M	95	67.477	Ailuropoda_melanoleuca
ENSGACG00000006884	tfb1m	99	85.185	ENSACIG00000014290	tfb1m	99	85.185	Amphilophus_citrinellus
ENSGACG00000006884	tfb1m	100	84.034	ENSAOCG00000004027	tfb1m	100	84.034	Amphiprion_ocellaris
ENSGACG00000006884	tfb1m	100	84.314	ENSAPEG00000020359	tfb1m	100	84.314	Amphiprion_percula
ENSGACG00000006884	tfb1m	98	85.795	ENSATEG00000006826	tfb1m	99	85.795	Anabas_testudineus
ENSGACG00000006884	tfb1m	96	68.622	ENSAPLG00000006328	TFB1M	98	68.622	Anas_platyrhynchos
ENSGACG00000006884	tfb1m	97	68.023	ENSACAG00000005244	TFB1M	99	68.023	Anolis_carolinensis
ENSGACG00000006884	tfb1m	92	71.865	ENSANAG00000021469	TFB1M	99	69.591	Aotus_nancymaae
ENSGACG00000006884	tfb1m	99	88.000	ENSACLG00000018734	tfb1m	97	88.000	Astatotilapia_calliptera
ENSGACG00000006884	tfb1m	93	78.419	ENSAMXG00000036128	tfb1m	90	78.419	Astyanax_mexicanus
ENSGACG00000006884	tfb1m	93	69.091	ENSBTAG00000031895	TFB1M	98	73.874	Bos_taurus
ENSGACG00000006884	tfb1m	90	43.119	WBGene00020189	tfbm-1	89	43.119	Caenorhabditis_elegans
ENSGACG00000006884	tfb1m	94	70.659	ENSCJAG00000012540	TFB1M	97	70.659	Callithrix_jacchus
ENSGACG00000006884	tfb1m	92	69.725	ENSCAFG00000000581	TFB1M	95	69.725	Canis_familiaris
ENSGACG00000006884	tfb1m	92	69.725	ENSCAFG00020015224	TFB1M	95	69.725	Canis_lupus_dingo
ENSGACG00000006884	tfb1m	94	69.069	ENSCHIG00000017013	TFB1M	99	69.069	Capra_hircus
ENSGACG00000006884	tfb1m	92	69.419	ENSTSYG00000012298	TFB1M	95	69.419	Carlito_syrichta
ENSGACG00000006884	tfb1m	66	48.276	ENSCAPG00000013843	TFB1M	77	48.276	Cavia_aperea
ENSGACG00000006884	tfb1m	92	66.972	ENSCPOG00000030422	TFB1M	95	66.972	Cavia_porcellus
ENSGACG00000006884	tfb1m	94	70.958	ENSCCAG00000015250	TFB1M	97	70.958	Cebus_capucinus
ENSGACG00000006884	tfb1m	95	46.588	ENSCATG00000009009	TFB1M	97	46.884	Cercocebus_atys
ENSGACG00000006884	tfb1m	93	69.909	ENSCLAG00000004500	TFB1M	96	69.909	Chinchilla_lanigera
ENSGACG00000006884	tfb1m	91	69.969	ENSCSAG00000013259	TFB1M	99	68.328	Chlorocebus_sabaeus
ENSGACG00000006884	tfb1m	92	68.293	ENSCHOG00000011245	TFB1M	95	68.293	Choloepus_hoffmanni
ENSGACG00000006884	tfb1m	93	73.780	ENSCPBG00000016320	TFB1M	96	73.780	Chrysemys_picta_bellii
ENSGACG00000006884	tfb1m	86	46.254	ENSCING00000003901	-	80	46.254	Ciona_intestinalis
ENSGACG00000006884	tfb1m	85	48.845	ENSCSAVG00000004721	-	79	48.845	Ciona_savignyi
ENSGACG00000006884	tfb1m	94	69.760	ENSCANG00000029768	TFB1M	99	69.760	Colobus_angolensis_palliatus
ENSGACG00000006884	tfb1m	93	68.085	ENSCGRG00001022866	Tfb1m	96	68.085	Cricetulus_griseus_chok1gshd
ENSGACG00000006884	tfb1m	89	67.834	ENSCGRG00000018084	Tfb1m	95	67.834	Cricetulus_griseus_crigri
ENSGACG00000006884	tfb1m	100	80.226	ENSCSEG00000000131	tfb1m	99	80.226	Cynoglossus_semilaevis
ENSGACG00000006884	tfb1m	100	82.203	ENSCVAG00000009201	tfb1m	100	82.203	Cyprinodon_variegatus
ENSGACG00000006884	tfb1m	97	72.222	ENSDARG00000040727	tfb1m	98	78.030	Danio_rerio
ENSGACG00000006884	tfb1m	97	65.527	ENSDNOG00000015984	-	97	65.527	Dasypus_novemcinctus
ENSGACG00000006884	tfb1m	80	59.011	ENSDNOG00000032672	-	98	59.011	Dasypus_novemcinctus
ENSGACG00000006884	tfb1m	93	68.485	ENSDORG00000012938	Tfb1m	95	68.485	Dipodomys_ordii
ENSGACG00000006884	tfb1m	89	47.040	FBgn0261381	mtTFB1	95	47.040	Drosophila_melanogaster
ENSGACG00000006884	tfb1m	92	49.695	ENSETEG00000005709	TFB1M	94	49.695	Echinops_telfairi
ENSGACG00000006884	tfb1m	90	55.172	ENSEBUG00000010530	tfb1m	95	53.593	Eptatretus_burgeri
ENSGACG00000006884	tfb1m	92	68.807	ENSEASG00005018887	TFB1M	94	68.807	Equus_asinus_asinus
ENSGACG00000006884	tfb1m	92	69.113	ENSECAG00000020997	TFB1M	94	69.113	Equus_caballus
ENSGACG00000006884	tfb1m	92	70.948	ENSEEUG00000014899	TFB1M	97	70.948	Erinaceus_europaeus
ENSGACG00000006884	tfb1m	95	79.701	ENSELUG00000002752	tfb1m	85	79.701	Esox_lucius
ENSGACG00000006884	tfb1m	92	69.113	ENSFCAG00000038785	TFB1M	95	69.113	Felis_catus
ENSGACG00000006884	tfb1m	61	30.415	ENSFALG00000011081	DIMT1	63	30.415	Ficedula_albicollis
ENSGACG00000006884	tfb1m	94	68.468	ENSFALG00000012500	TFB1M	96	68.468	Ficedula_albicollis
ENSGACG00000006884	tfb1m	90	68.438	ENSFDAG00000016985	TFB1M	97	66.767	Fukomys_damarensis
ENSGACG00000006884	tfb1m	100	83.898	ENSFHEG00000008407	tfb1m	100	83.898	Fundulus_heteroclitus
ENSGACG00000006884	tfb1m	99	79.603	ENSGMOG00000018738	tfb1m	100	79.603	Gadus_morhua
ENSGACG00000006884	tfb1m	92	71.166	ENSGALG00000013647	TFB1M	93	71.166	Gallus_gallus
ENSGACG00000006884	tfb1m	100	81.638	ENSGAFG00000017997	tfb1m	100	81.638	Gambusia_affinis
ENSGACG00000006884	tfb1m	94	72.455	ENSGAGG00000025345	TFB1M	97	72.455	Gopherus_agassizii
ENSGACG00000006884	tfb1m	92	70.031	ENSGGOG00000012189	TFB1M	95	70.031	Gorilla_gorilla
ENSGACG00000006884	tfb1m	99	88.286	ENSHBUG00000019396	tfb1m	97	88.286	Haplochromis_burtoni
ENSGACG00000006884	tfb1m	92	69.419	ENSHGLG00000002028	TFB1M	94	69.419	Heterocephalus_glaber_female
ENSGACG00000006884	tfb1m	92	69.419	ENSHGLG00100001412	TFB1M	94	69.419	Heterocephalus_glaber_male
ENSGACG00000006884	tfb1m	94	80.240	ENSHCOG00000014135	tfb1m	95	80.240	Hippocampus_comes
ENSGACG00000006884	tfb1m	93	77.812	ENSIPUG00000010964	tfb1m	96	77.812	Ictalurus_punctatus
ENSGACG00000006884	tfb1m	92	69.725	ENSSTOG00000026264	TFB1M	95	69.725	Ictidomys_tridecemlineatus
ENSGACG00000006884	tfb1m	99	66.761	ENSJJAG00000022171	Tfb1m	98	66.761	Jaculus_jaculus
ENSGACG00000006884	tfb1m	100	80.226	ENSKMAG00000012667	tfb1m	100	80.226	Kryptolebias_marmoratus
ENSGACG00000006884	tfb1m	100	83.473	ENSLBEG00000011505	tfb1m	100	83.473	Labrus_bergylta
ENSGACG00000006884	tfb1m	92	74.233	ENSLACG00000012594	TFB1M	93	74.233	Latimeria_chalumnae
ENSGACG00000006884	tfb1m	95	69.322	ENSLOCG00000016850	tfb1m	97	69.208	Lepisosteus_oculatus
ENSGACG00000006884	tfb1m	92	68.405	ENSLAFG00000014035	-	95	68.196	Loxodonta_africana
ENSGACG00000006884	tfb1m	91	56.211	ENSLAFG00000032309	-	100	56.211	Loxodonta_africana
ENSGACG00000006884	tfb1m	95	68.843	ENSMFAG00000031968	TFB1M	98	68.843	Macaca_fascicularis
ENSGACG00000006884	tfb1m	95	69.139	ENSMMUG00000011171	TFB1M	98	69.139	Macaca_mulatta
ENSGACG00000006884	tfb1m	95	68.843	ENSMNEG00000042278	TFB1M	98	68.843	Macaca_nemestrina
ENSGACG00000006884	tfb1m	95	69.436	ENSMLEG00000000044	TFB1M	98	69.436	Mandrillus_leucophaeus
ENSGACG00000006884	tfb1m	99	85.552	ENSMAMG00000009423	tfb1m	99	85.552	Mastacembelus_armatus
ENSGACG00000006884	tfb1m	99	88.000	ENSMZEG00005005640	tfb1m	93	88.000	Maylandia_zebra
ENSGACG00000006884	tfb1m	75	77.358	ENSMGAG00000012779	TFB1M	100	77.358	Meleagris_gallopavo
ENSGACG00000006884	tfb1m	93	70.517	ENSMAUG00000006705	Tfb1m	95	70.517	Mesocricetus_auratus
ENSGACG00000006884	tfb1m	92	70.336	ENSMICG00000045849	TFB1M	95	70.336	Microcebus_murinus
ENSGACG00000006884	tfb1m	92	69.632	ENSMOCG00000013879	Tfb1m	96	69.091	Microtus_ochrogaster
ENSGACG00000006884	tfb1m	99	86.313	ENSMMOG00000002203	tfb1m	99	86.313	Mola_mola
ENSGACG00000006884	tfb1m	92	70.859	ENSMODG00000008169	TFB1M	100	68.023	Monodelphis_domestica
ENSGACG00000006884	tfb1m	99	85.269	ENSMALG00000011657	tfb1m	94	85.269	Monopterus_albus
ENSGACG00000006884	tfb1m	93	68.788	MGP_CAROLIEiJ_G0021018	Tfb1m	96	68.788	Mus_caroli
ENSGACG00000006884	tfb1m	93	69.301	ENSMUSG00000036983	Tfb1m	95	69.301	Mus_musculus
ENSGACG00000006884	tfb1m	92	70.552	MGP_PahariEiJ_G0023336	Tfb1m	95	70.213	Mus_pahari
ENSGACG00000006884	tfb1m	93	69.301	MGP_SPRETEiJ_G0021923	Tfb1m	95	69.301	Mus_spretus
ENSGACG00000006884	tfb1m	92	68.807	ENSMPUG00000002073	TFB1M	95	68.807	Mustela_putorius_furo
ENSGACG00000006884	tfb1m	92	68.807	ENSMLUG00000011329	TFB1M	95	68.807	Myotis_lucifugus
ENSGACG00000006884	tfb1m	92	69.419	ENSNGAG00000015154	Tfb1m	92	69.419	Nannospalax_galili
ENSGACG00000006884	tfb1m	99	86.723	ENSNBRG00000009004	tfb1m	99	86.723	Neolamprologus_brichardi
ENSGACG00000006884	tfb1m	92	70.336	ENSNLEG00000034352	TFB1M	95	70.336	Nomascus_leucogenys
ENSGACG00000006884	tfb1m	95	56.548	ENSMEUG00000001699	-	97	56.548	Notamacropus_eugenii
ENSGACG00000006884	tfb1m	93	54.545	ENSOPRG00000008921	TFB1M	97	54.545	Ochotona_princeps
ENSGACG00000006884	tfb1m	93	67.477	ENSODEG00000005915	TFB1M	94	67.477	Octodon_degus
ENSGACG00000006884	tfb1m	94	91.617	ENSONIG00000008109	tfb1m	97	91.617	Oreochromis_niloticus
ENSGACG00000006884	tfb1m	92	70.031	ENSOCUG00000012154	TFB1M	96	70.031	Oryctolagus_cuniculus
ENSGACG00000006884	tfb1m	97	82.507	ENSORLG00000017328	tfb1m	83	82.507	Oryzias_latipes
ENSGACG00000006884	tfb1m	97	82.216	ENSORLG00020002250	tfb1m	100	82.216	Oryzias_latipes_hni
ENSGACG00000006884	tfb1m	93	85.714	ENSORLG00015016067	tfb1m	96	85.714	Oryzias_latipes_hsok
ENSGACG00000006884	tfb1m	97	84.012	ENSOMEG00000015641	tfb1m	98	84.012	Oryzias_melastigma
ENSGACG00000006884	tfb1m	92	67.073	ENSOGAG00000011681	TFB1M	95	67.073	Otolemur_garnettii
ENSGACG00000006884	tfb1m	94	67.552	ENSOARG00000004216	TFB1M	99	67.552	Ovis_aries
ENSGACG00000006884	tfb1m	96	68.035	ENSPPAG00000030834	TFB1M	99	68.035	Pan_paniscus
ENSGACG00000006884	tfb1m	92	68.807	ENSPPRG00000013578	TFB1M	95	68.807	Panthera_pardus
ENSGACG00000006884	tfb1m	92	68.807	ENSPTIG00000003540	TFB1M	95	68.807	Panthera_tigris_altaica
ENSGACG00000006884	tfb1m	92	69.725	ENSPTRG00000018730	TFB1M	95	69.725	Pan_troglodytes
ENSGACG00000006884	tfb1m	95	69.139	ENSPANG00000007489	TFB1M	98	69.139	Papio_anubis
ENSGACG00000006884	tfb1m	93	76.667	ENSPKIG00000021117	tfb1m	94	76.667	Paramormyrops_kingsleyae
ENSGACG00000006884	tfb1m	94	71.856	ENSPSIG00000006643	TFB1M	98	71.856	Pelodiscus_sinensis
ENSGACG00000006884	tfb1m	95	82.143	ENSPMGG00000011289	tfb1m	97	82.143	Periophthalmus_magnuspinnatus
ENSGACG00000006884	tfb1m	93	68.997	ENSPEMG00000010410	Tfb1m	95	68.997	Peromyscus_maniculatus_bairdii
ENSGACG00000006884	tfb1m	55	64.467	ENSPMAG00000008056	tfb1m	92	62.802	Petromyzon_marinus
ENSGACG00000006884	tfb1m	96	69.027	ENSPCIG00000001010	TFB1M	94	69.027	Phascolarctos_cinereus
ENSGACG00000006884	tfb1m	100	80.337	ENSPFOG00000005139	tfb1m	100	80.337	Poecilia_formosa
ENSGACG00000006884	tfb1m	100	81.073	ENSPLAG00000021410	tfb1m	100	81.073	Poecilia_latipinna
ENSGACG00000006884	tfb1m	100	80.791	ENSPMEG00000020166	tfb1m	100	80.791	Poecilia_mexicana
ENSGACG00000006884	tfb1m	100	81.356	ENSPREG00000022392	tfb1m	100	81.356	Poecilia_reticulata
ENSGACG00000006884	tfb1m	92	67.988	ENSPPYG00000017123	TFB1M	95	67.988	Pongo_abelii
ENSGACG00000006884	tfb1m	80	57.092	ENSPCAG00000007078	TFB1M	94	57.092	Procavia_capensis
ENSGACG00000006884	tfb1m	92	70.336	ENSPCOG00000028453	TFB1M	95	70.336	Propithecus_coquereli
ENSGACG00000006884	tfb1m	92	70.642	ENSPVAG00000015818	TFB1M	95	70.642	Pteropus_vampyrus
ENSGACG00000006884	tfb1m	99	87.429	ENSPNYG00000007330	tfb1m	97	87.429	Pundamilia_nyererei
ENSGACG00000006884	tfb1m	98	75.216	ENSPNAG00000007507	tfb1m	98	75.216	Pygocentrus_nattereri
ENSGACG00000006884	tfb1m	93	70.213	ENSRNOG00000056223	Tfb1m	95	70.213	Rattus_norvegicus
ENSGACG00000006884	tfb1m	94	69.760	ENSRBIG00000039975	TFB1M	99	69.760	Rhinopithecus_bieti
ENSGACG00000006884	tfb1m	94	69.461	ENSRROG00000033802	TFB1M	99	69.461	Rhinopithecus_roxellana
ENSGACG00000006884	tfb1m	95	70.623	ENSSBOG00000008663	TFB1M	98	70.623	Saimiri_boliviensis_boliviensis
ENSGACG00000006884	tfb1m	96	60.000	ENSSHAG00000013259	TFB1M	99	60.000	Sarcophilus_harrisii
ENSGACG00000006884	tfb1m	93	74.164	ENSSFOG00015009739	tfb1m	94	74.164	Scleropages_formosus
ENSGACG00000006884	tfb1m	100	85.876	ENSSMAG00000008229	tfb1m	100	85.876	Scophthalmus_maximus
ENSGACG00000006884	tfb1m	100	86.275	ENSSDUG00000011871	tfb1m	100	86.275	Seriola_dumerili
ENSGACG00000006884	tfb1m	100	85.714	ENSSLDG00000023923	tfb1m	100	85.714	Seriola_lalandi_dorsalis
ENSGACG00000006884	tfb1m	63	72.973	ENSSARG00000003159	TFB1M	100	72.973	Sorex_araneus
ENSGACG00000006884	tfb1m	94	67.665	ENSSPUG00000015253	TFB1M	97	67.665	Sphenodon_punctatus
ENSGACG00000006884	tfb1m	100	85.154	ENSSPAG00000019515	tfb1m	100	85.154	Stegastes_partitus
ENSGACG00000006884	tfb1m	92	69.419	ENSSSCG00000024361	TFB1M	96	69.419	Sus_scrofa
ENSGACG00000006884	tfb1m	95	68.060	ENSTGUG00000011136	TFB1M	97	68.060	Taeniopygia_guttata
ENSGACG00000006884	tfb1m	99	83.286	ENSTRUG00000020334	tfb1m	99	83.286	Takifugu_rubripes
ENSGACG00000006884	tfb1m	62	83.636	ENSTNIG00000016882	tfb1m	97	83.636	Tetraodon_nigroviridis
ENSGACG00000006884	tfb1m	92	68.807	ENSTBEG00000008769	TFB1M	94	68.807	Tupaia_belangeri
ENSGACG00000006884	tfb1m	92	69.419	ENSTTRG00000006327	TFB1M	97	69.419	Tursiops_truncatus
ENSGACG00000006884	tfb1m	92	67.791	ENSUAMG00000017802	TFB1M	97	66.077	Ursus_americanus
ENSGACG00000006884	tfb1m	96	66.667	ENSUMAG00000013377	TFB1M	89	66.667	Ursus_maritimus
ENSGACG00000006884	tfb1m	92	67.890	ENSVPAG00000010148	TFB1M	96	67.890	Vicugna_pacos
ENSGACG00000006884	tfb1m	92	69.113	ENSVVUG00000007643	TFB1M	96	69.113	Vulpes_vulpes
ENSGACG00000006884	tfb1m	94	73.353	ENSXETG00000007852	tfb1m	97	73.353	Xenopus_tropicalis
ENSGACG00000006884	tfb1m	100	82.203	ENSXCOG00000013230	tfb1m	100	82.203	Xiphophorus_couchianus
ENSGACG00000006884	tfb1m	100	82.203	ENSXMAG00000019222	tfb1m	100	82.203	Xiphophorus_maculatus