EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000006909 (Gene tree)
Gene ID: -
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 15798 bases
Position: chrgroupXV:3646405-3662202
Accession: 20959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000009170	RRM_1	PF00076.22	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000009190	SCAF8-201	3441	-	ENSGACP00000009170	1117 (aa)	-	G3NV01

Gene Model

Click here to download ENSGACG00000006909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000006909's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000006909	SCAF8	100	55.237	ENSG00000213079	SCAF8	93	54.255	Homo_sapiens
ENSGACG00000006909	SCAF8	99	82.624	ENSAPOG00000015527	SCAF8	77	82.582	Acanthochromis_polyacanthus
ENSGACG00000006909	SCAF8	100	53.580	ENSAMEG00000007583	SCAF8	90	52.818	Ailuropoda_melanoleuca
ENSGACG00000006909	SCAF8	99	82.713	ENSAOCG00000002421	SCAF8	76	82.670	Amphiprion_ocellaris
ENSGACG00000006909	SCAF8	99	80.089	ENSATEG00000006959	SCAF8	96	80.000	Anabas_testudineus
ENSGACG00000006909	SCAF8	88	75.398	ENSAPLG00000005765	SCAF8	85	65.920	Anas_platyrhynchos
ENSGACG00000006909	SCAF8	92	65.295	ENSACAG00000005282	SCAF8	80	69.865	Anolis_carolinensis
ENSGACG00000006909	SCAF8	100	55.209	ENSANAG00000036184	SCAF8	93	54.255	Aotus_nancymaae
ENSGACG00000006909	SCAF8	99	81.624	ENSACLG00000018828	SCAF8	80	81.383	Astatotilapia_calliptera
ENSGACG00000006909	SCAF8	100	54.828	ENSBTAG00000031917	SCAF8	93	53.846	Bos_taurus
ENSGACG00000006909	SCAF8	100	54.873	ENSCJAG00000012631	SCAF8	90	53.376	Callithrix_jacchus
ENSGACG00000006909	SCAF8	99	54.778	ENSCAFG00000000570	SCAF8	93	53.909	Canis_familiaris
ENSGACG00000006909	SCAF8	99	54.778	ENSCAFG00020015048	SCAF8	91	53.909	Canis_lupus_dingo
ENSGACG00000006909	SCAF8	52	43.968	ENSCAFG00020026019	SCAF4	52	61.780	Canis_lupus_dingo
ENSGACG00000006909	SCAF8	100	54.910	ENSCHIG00000025041	SCAF8	93	53.928	Capra_hircus
ENSGACG00000006909	SCAF8	100	54.598	ENSTSYG00000010991	SCAF8	91	53.525	Carlito_syrichta
ENSGACG00000006909	SCAF8	62	69.758	ENSCAPG00000003300	SCAF8	70	69.758	Cavia_aperea
ENSGACG00000006909	SCAF8	100	49.372	ENSCPOG00000030311	-	59	40.866	Cavia_porcellus
ENSGACG00000006909	SCAF8	99	48.866	ENSCPOG00000022216	-	92	48.870	Cavia_porcellus
ENSGACG00000006909	SCAF8	100	54.865	ENSCCAG00000024952	SCAF8	93	53.966	Cebus_capucinus
ENSGACG00000006909	SCAF8	100	55.220	ENSCATG00000035361	SCAF8	93	54.241	Cercocebus_atys
ENSGACG00000006909	SCAF8	100	53.979	ENSCLAG00000004910	SCAF8	93	52.980	Chinchilla_lanigera
ENSGACG00000006909	SCAF8	100	54.290	ENSCSAG00000013430	SCAF8	93	53.328	Chlorocebus_sabaeus
ENSGACG00000006909	SCAF8	93	72.326	ENSCPBG00000016330	SCAF8	78	70.026	Chrysemys_picta_bellii
ENSGACG00000006909	SCAF8	100	55.220	ENSCANG00000039499	SCAF8	93	54.030	Colobus_angolensis_palliatus
ENSGACG00000006909	SCAF8	100	54.746	ENSCGRG00001020167	Scaf8	93	53.601	Cricetulus_griseus_chok1gshd
ENSGACG00000006909	SCAF8	99	54.493	ENSCGRG00000004120	Scaf8	93	53.339	Cricetulus_griseus_crigri
ENSGACG00000006909	SCAF8	99	79.185	ENSCSEG00000000043	-	78	78.710	Cynoglossus_semilaevis
ENSGACG00000006909	SCAF8	95	75.304	ENSCVAG00000000925	SCAF8	77	75.372	Cyprinodon_variegatus
ENSGACG00000006909	SCAF8	95	52.926	ENSDNOG00000025271	SCAF8	93	52.865	Dasypus_novemcinctus
ENSGACG00000006909	SCAF8	94	70.375	ENSDORG00000006391	Scaf8	93	53.465	Dipodomys_ordii
ENSGACG00000006909	SCAF8	100	54.150	ENSEASG00005018879	SCAF8	93	54.078	Equus_asinus_asinus
ENSGACG00000006909	SCAF8	100	53.344	ENSECAG00000005540	SCAF8	93	53.481	Equus_caballus
ENSGACG00000006909	SCAF8	98	68.118	ENSELUG00000002779	SCAF8	75	68.166	Esox_lucius
ENSGACG00000006909	SCAF8	100	55.446	ENSFCAG00000023424	SCAF8	93	54.211	Felis_catus
ENSGACG00000006909	SCAF8	88	75.217	ENSFALG00000012433	SCAF8	83	67.834	Ficedula_albicollis
ENSGACG00000006909	SCAF8	100	54.471	ENSFDAG00000010335	SCAF8	93	53.404	Fukomys_damarensis
ENSGACG00000006909	SCAF8	99	77.460	ENSFHEG00000008284	SCAF8	77	77.176	Fundulus_heteroclitus
ENSGACG00000006909	SCAF8	83	79.616	ENSGMOG00000018812	SCAF8	83	78.975	Gadus_morhua
ENSGACG00000006909	SCAF8	94	70.390	ENSGALG00000013635	SCAF8	81	67.526	Gallus_gallus
ENSGACG00000006909	SCAF8	99	77.377	ENSGAFG00000018033	SCAF8	78	77.807	Gambusia_affinis
ENSGACG00000006909	SCAF8	51	62.774	ENSGAGG00000017820	-	67	57.911	Gopherus_agassizii
ENSGACG00000006909	SCAF8	100	55.237	ENSGGOG00000008645	SCAF8	93	54.255	Gorilla_gorilla
ENSGACG00000006909	SCAF8	99	81.445	ENSHBUG00000019537	SCAF8	80	81.294	Haplochromis_burtoni
ENSGACG00000006909	SCAF8	100	55.144	ENSHGLG00000003619	SCAF8	93	54.061	Heterocephalus_glaber_female
ENSGACG00000006909	SCAF8	99	54.938	ENSHGLG00100004708	SCAF8	93	53.846	Heterocephalus_glaber_male
ENSGACG00000006909	SCAF8	99	54.359	ENSSTOG00000026043	SCAF8	92	53.891	Ictidomys_tridecemlineatus
ENSGACG00000006909	SCAF8	92	69.934	ENSJJAG00000020480	Scaf8	92	53.560	Jaculus_jaculus
ENSGACG00000006909	SCAF8	99	79.679	ENSKMAG00000012767	SCAF8	78	79.644	Kryptolebias_marmoratus
ENSGACG00000006909	SCAF8	83	93.657	ENSLBEG00000012484	-	65	91.275	Labrus_bergylta
ENSGACG00000006909	SCAF8	100	57.143	ENSLACG00000001394	SCAF8	100	56.525	Latimeria_chalumnae
ENSGACG00000006909	SCAF8	100	62.672	ENSLOCG00000016856	SCAF8	93	62.803	Lepisosteus_oculatus
ENSGACG00000006909	SCAF8	99	53.061	ENSLAFG00000000022	SCAF8	93	54.207	Loxodonta_africana
ENSGACG00000006909	SCAF8	100	55.220	ENSMFAG00000032738	SCAF8	93	54.241	Macaca_fascicularis
ENSGACG00000006909	SCAF8	100	55.220	ENSMMUG00000015163	SCAF8	93	54.241	Macaca_mulatta
ENSGACG00000006909	SCAF8	100	55.220	ENSMNEG00000043466	SCAF8	93	54.241	Macaca_nemestrina
ENSGACG00000006909	SCAF8	99	55.016	ENSMLEG00000034845	SCAF8	93	54.030	Mandrillus_leucophaeus
ENSGACG00000006909	SCAF8	95	80.316	ENSMAMG00000009457	SCAF8	76	80.463	Mastacembelus_armatus
ENSGACG00000006909	SCAF8	99	81.534	ENSMZEG00005005698	SCAF8	80	81.294	Maylandia_zebra
ENSGACG00000006909	SCAF8	96	69.192	ENSMGAG00000012762	SCAF8	84	66.416	Meleagris_gallopavo
ENSGACG00000006909	SCAF8	99	54.359	ENSMAUG00000009513	Scaf8	93	53.542	Mesocricetus_auratus
ENSGACG00000006909	SCAF8	100	54.604	ENSMICG00000028965	SCAF8	93	53.635	Microcebus_murinus
ENSGACG00000006909	SCAF8	100	55.164	ENSMOCG00000014950	Scaf8	93	53.934	Microtus_ochrogaster
ENSGACG00000006909	SCAF8	97	78.093	ENSMMOG00000002216	SCAF8	77	78.062	Mola_mola
ENSGACG00000006909	SCAF8	92	72.011	ENSMODG00000008301	SCAF8	50	58.537	Monodelphis_domestica
ENSGACG00000006909	SCAF8	99	81.007	ENSMALG00000011584	SCAF8	78	80.597	Monopterus_albus
ENSGACG00000006909	SCAF8	93	70.267	MGP_CAROLIEiJ_G0021016	Scaf8	82	68.800	Mus_caroli
ENSGACG00000006909	SCAF8	100	54.583	ENSMUSG00000046201	Scaf8	93	53.764	Mus_musculus
ENSGACG00000006909	SCAF8	100	54.307	MGP_PahariEiJ_G0023334	Scaf8	82	69.190	Mus_pahari
ENSGACG00000006909	SCAF8	100	54.157	ENSMPUG00000001974	SCAF8	93	53.269	Mustela_putorius_furo
ENSGACG00000006909	SCAF8	100	53.771	ENSMLUG00000029190	SCAF8	93	52.922	Myotis_lucifugus
ENSGACG00000006909	SCAF8	94	70.079	ENSNGAG00000012332	Scaf8	83	68.635	Nannospalax_galili
ENSGACG00000006909	SCAF8	100	76.492	ENSNBRG00000009067	SCAF8	94	76.135	Neolamprologus_brichardi
ENSGACG00000006909	SCAF8	100	54.190	ENSNLEG00000015509	SCAF8	92	52.994	Nomascus_leucogenys
ENSGACG00000006909	SCAF8	73	75.258	ENSOPRG00000018413	-	77	75.258	Ochotona_princeps
ENSGACG00000006909	SCAF8	100	54.620	ENSODEG00000007296	SCAF8	93	53.557	Octodon_degus
ENSGACG00000006909	SCAF8	99	80.961	ENSONIG00000008119	SCAF8	92	80.637	Oreochromis_niloticus
ENSGACG00000006909	SCAF8	50	53.035	ENSONIG00000004687	scaf4a	56	52.805	Oreochromis_niloticus
ENSGACG00000006909	SCAF8	99	54.778	ENSOCUG00000026063	SCAF8	92	53.871	Oryctolagus_cuniculus
ENSGACG00000006909	SCAF8	99	78.354	ENSORLG00000017358	SCAF8	78	78.222	Oryzias_latipes
ENSGACG00000006909	SCAF8	99	78.354	ENSORLG00020002214	SCAF8	78	78.044	Oryzias_latipes_hni
ENSGACG00000006909	SCAF8	99	78.444	ENSORLG00015015779	SCAF8	78	78.311	Oryzias_latipes_hsok
ENSGACG00000006909	SCAF8	99	78.980	ENSOMEG00000015471	SCAF8	77	79.022	Oryzias_melastigma
ENSGACG00000006909	SCAF8	86	73.913	ENSOGAG00000034223	SCAF8	90	53.097	Otolemur_garnettii
ENSGACG00000006909	SCAF8	99	54.575	ENSOARG00000004159	SCAF8	93	53.586	Ovis_aries
ENSGACG00000006909	SCAF8	100	55.139	ENSPPAG00000039826	SCAF8	93	54.160	Pan_paniscus
ENSGACG00000006909	SCAF8	100	55.192	ENSPPRG00000023175	SCAF8	93	54.293	Panthera_pardus
ENSGACG00000006909	SCAF8	99	54.988	ENSPTIG00000014836	SCAF8	93	54.081	Panthera_tigris_altaica
ENSGACG00000006909	SCAF8	100	55.057	ENSPTRG00000018727	SCAF8	93	54.078	Pan_troglodytes
ENSGACG00000006909	SCAF8	100	55.220	ENSPANG00000017489	SCAF8	93	52.447	Papio_anubis
ENSGACG00000006909	SCAF8	100	67.764	ENSPKIG00000021212	SCAF8	90	68.544	Paramormyrops_kingsleyae
ENSGACG00000006909	SCAF8	80	68.092	ENSPSIG00000008614	SCAF8	68	64.839	Pelodiscus_sinensis
ENSGACG00000006909	SCAF8	99	54.764	ENSPEMG00000010531	Scaf8	93	53.560	Peromyscus_maniculatus_bairdii
ENSGACG00000006909	SCAF8	99	78.222	ENSPFOG00000004176	SCAF8	93	71.643	Poecilia_formosa
ENSGACG00000006909	SCAF8	99	78.400	ENSPLAG00000021432	SCAF8	77	78.654	Poecilia_latipinna
ENSGACG00000006909	SCAF8	99	77.956	ENSPMEG00000007591	SCAF8	84	77.656	Poecilia_mexicana
ENSGACG00000006909	SCAF8	99	78.044	ENSPREG00000000652	SCAF8	77	77.945	Poecilia_reticulata
ENSGACG00000006909	SCAF8	100	54.412	ENSPPYG00000017121	SCAF8	93	53.268	Pongo_abelii
ENSGACG00000006909	SCAF8	80	79.466	ENSPCAG00000013044	SCAF8	74	77.833	Procavia_capensis
ENSGACG00000006909	SCAF8	100	54.694	ENSPCOG00000002067	SCAF8	92	53.604	Propithecus_coquereli
ENSGACG00000006909	SCAF8	100	55.000	ENSPVAG00000005582	SCAF8	94	53.607	Pteropus_vampyrus
ENSGACG00000006909	SCAF8	99	81.624	ENSPNYG00000007277	SCAF8	80	81.383	Pundamilia_nyererei
ENSGACG00000006909	SCAF8	99	69.029	ENSPNAG00000024740	SCAF8	82	68.761	Pygocentrus_nattereri
ENSGACG00000006909	SCAF8	100	54.054	ENSRNOG00000016919	Scaf8	82	68.924	Rattus_norvegicus
ENSGACG00000006909	SCAF8	100	55.302	ENSRBIG00000035769	SCAF8	93	54.295	Rhinopithecus_bieti
ENSGACG00000006909	SCAF8	100	55.302	ENSRROG00000013580	SCAF8	93	54.295	Rhinopithecus_roxellana
ENSGACG00000006909	SCAF8	100	54.812	ENSSBOG00000027023	SCAF8	93	54.173	Saimiri_boliviensis_boliviensis
ENSGACG00000006909	SCAF8	100	54.065	ENSSHAG00000009915	SCAF8	93	54.146	Sarcophilus_harrisii
ENSGACG00000006909	SCAF8	98	63.453	ENSSFOG00015009481	SCAF8	86	76.862	Scleropages_formosus
ENSGACG00000006909	SCAF8	99	80.404	ENSSMAG00000008275	SCAF8	77	80.611	Scophthalmus_maximus
ENSGACG00000006909	SCAF8	93	72.349	ENSSPUG00000015219	SCAF8	83	65.513	Sphenodon_punctatus
ENSGACG00000006909	SCAF8	89	91.691	ENSSPAG00000019433	SCAF8	69	90.504	Stegastes_partitus
ENSGACG00000006909	SCAF8	100	54.258	ENSSSCG00000004070	SCAF8	93	54.218	Sus_scrofa
ENSGACG00000006909	SCAF8	94	70.410	ENSTGUG00000011151	SCAF8	83	68.560	Taeniopygia_guttata
ENSGACG00000006909	SCAF8	100	75.515	ENSTRUG00000009243	SCAF8	80	75.344	Takifugu_rubripes
ENSGACG00000006909	SCAF8	100	76.746	ENSTNIG00000016885	SCAF8	99	76.039	Tetraodon_nigroviridis
ENSGACG00000006909	SCAF8	99	53.624	ENSTTRG00000014538	SCAF8	93	52.510	Tursiops_truncatus
ENSGACG00000006909	SCAF8	100	54.664	ENSUAMG00000024736	SCAF8	93	53.675	Ursus_americanus
ENSGACG00000006909	SCAF8	98	53.885	ENSUMAG00000013404	SCAF8	93	53.094	Ursus_maritimus
ENSGACG00000006909	SCAF8	57	70.898	ENSVPAG00000012465	SCAF8	78	84.685	Vicugna_pacos
ENSGACG00000006909	SCAF8	99	54.988	ENSVVUG00000007532	SCAF8	93	54.061	Vulpes_vulpes
ENSGACG00000006909	SCAF8	89	70.392	ENSXETG00000013132	scaf8	78	69.697	Xenopus_tropicalis
ENSGACG00000006909	SCAF8	99	77.956	ENSXMAG00000019192	SCAF8	78	77.768	Xiphophorus_maculatus