EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000007041 (Gene tree)
Gene ID: -
Gene Symbol: rpl29
Alias: zgc:92868
Full Name: ribosomal protein L29
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 1937 bases
Position: chrgroupXVII:5834972-5836908
Accession: ZDB-GENE-040801-167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000009334	Ribosomal_L29e	PF01779.17	1.3e-25	1	1
ENSGACP00000009339	Ribosomal_L29e	PF01779.17	1.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000009354	-	286	-	ENSGACP00000009334	77 (aa)	-	G3NVH0
ENSGACT00000009359	-	350	-	ENSGACP00000009339	77 (aa)	-	G3NVH0

Gene Model

Click here to download ENSGACG00000007041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000007041's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000007041	rpl29	60	93.478	ENSG00000162244	RPL29	97	91.667	Homo_sapiens
ENSGACG00000007041	rpl29	70	88.889	ENSAPOG00000002586	rpl29	97	85.484	Acanthochromis_polyacanthus
ENSGACG00000007041	rpl29	100	52.500	ENSAMEG00000007743	-	52	52.500	Ailuropoda_melanoleuca
ENSGACG00000007041	rpl29	70	92.593	ENSACIG00000018340	rpl29	98	88.889	Amphilophus_citrinellus
ENSGACG00000007041	rpl29	70	92.593	ENSAOCG00000016652	rpl29	97	88.710	Amphiprion_ocellaris
ENSGACG00000007041	rpl29	70	92.593	ENSAPEG00000005754	rpl29	97	88.710	Amphiprion_percula
ENSGACG00000007041	rpl29	75	91.379	ENSACAG00000006888	RPL29	89	91.379	Anolis_carolinensis
ENSGACG00000007041	rpl29	60	93.478	ENSANAG00000024147	-	58	97.143	Aotus_nancymaae
ENSGACG00000007041	rpl29	79	91.803	ENSACLG00000017820	rpl29	95	91.803	Astatotilapia_calliptera
ENSGACG00000007041	rpl29	84	81.538	ENSAMXG00000038794	rpl29	92	88.136	Astyanax_mexicanus
ENSGACG00000007041	rpl29	70	62.963	WBGene00004443	rpl-29	87	62.963	Caenorhabditis_elegans
ENSGACG00000007041	rpl29	60	93.478	ENSCJAG00000042339	-	58	97.143	Callithrix_jacchus
ENSGACG00000007041	rpl29	60	93.478	ENSCCAG00000027980	-	58	97.143	Cebus_capucinus
ENSGACG00000007041	rpl29	60	85.106	ENSCSAG00000017871	-	52	84.746	Chlorocebus_sabaeus
ENSGACG00000007041	rpl29	68	73.077	ENSCING00000018496	-	90	73.077	Ciona_intestinalis
ENSGACG00000007041	rpl29	68	75.000	ENSCSAVG00000005231	-	88	75.000	Ciona_savignyi
ENSGACG00000007041	rpl29	60	93.478	ENSCGRG00001016452	-	85	91.379	Cricetulus_griseus_chok1gshd
ENSGACG00000007041	rpl29	65	94.000	ENSCSEG00000010267	rpl29	92	90.164	Cynoglossus_semilaevis
ENSGACG00000007041	rpl29	65	94.000	ENSCVAG00000023098	rpl29	95	91.803	Cyprinodon_variegatus
ENSGACG00000007041	rpl29	74	91.228	ENSDARG00000077717	rpl29	89	91.228	Danio_rerio
ENSGACG00000007041	rpl29	65	64.000	FBgn0016726	RpL29	66	64.000	Drosophila_melanogaster
ENSGACG00000007041	rpl29	60	86.957	ENSETEG00000001015	-	53	73.494	Echinops_telfairi
ENSGACG00000007041	rpl29	96	57.895	ENSETEG00000011086	-	53	57.895	Echinops_telfairi
ENSGACG00000007041	rpl29	56	83.721	ENSEASG00005005507	-	66	83.721	Equus_asinus_asinus
ENSGACG00000007041	rpl29	91	78.571	ENSELUG00000015592	RL29	89	83.871	Esox_lucius
ENSGACG00000007041	rpl29	68	67.308	ENSFCAG00000043006	-	64	67.308	Felis_catus
ENSGACG00000007041	rpl29	74	57.895	ENSFCAG00000035470	-	83	49.351	Felis_catus
ENSGACG00000007041	rpl29	60	86.957	ENSFALG00000008925	RPL29	85	86.207	Ficedula_albicollis
ENSGACG00000007041	rpl29	79	88.525	ENSFHEG00000015425	rpl29	95	88.525	Fundulus_heteroclitus
ENSGACG00000007041	rpl29	70	85.185	ENSGMOG00000003626	rpl29	99	74.667	Gadus_morhua
ENSGACG00000007041	rpl29	60	91.304	ENSGALG00000026978	RPL29	82	89.655	Gallus_gallus
ENSGACG00000007041	rpl29	79	88.525	ENSGAFG00000012868	rpl29	95	88.525	Gambusia_affinis
ENSGACG00000007041	rpl29	60	77.083	ENSGAGG00000024203	-	89	77.083	Gopherus_agassizii
ENSGACG00000007041	rpl29	60	93.478	ENSGGOG00000024691	RPL29	60	94.444	Gorilla_gorilla
ENSGACG00000007041	rpl29	79	91.803	ENSHBUG00000010519	rpl29	95	91.803	Haplochromis_burtoni
ENSGACG00000007041	rpl29	65	94.000	ENSHCOG00000000478	rpl29	90	84.507	Hippocampus_comes
ENSGACG00000007041	rpl29	82	82.540	ENSIPUG00000001196	rpl29	98	82.540	Ictalurus_punctatus
ENSGACG00000007041	rpl29	70	94.444	ENSKMAG00000011291	rpl29	98	88.889	Kryptolebias_marmoratus
ENSGACG00000007041	rpl29	70	90.741	ENSLBEG00000016213	rpl29	100	80.882	Labrus_bergylta
ENSGACG00000007041	rpl29	75	82.759	ENSLACG00000018031	-	93	80.952	Latimeria_chalumnae
ENSGACG00000007041	rpl29	82	80.952	ENSLACG00000018622	rpl29	98	80.952	Latimeria_chalumnae
ENSGACG00000007041	rpl29	60	93.478	ENSLOCG00000013798	rpl29	98	84.375	Lepisosteus_oculatus
ENSGACG00000007041	rpl29	70	92.593	ENSMAMG00000014274	rpl29	66	87.302	Mastacembelus_armatus
ENSGACG00000007041	rpl29	79	91.803	ENSMZEG00005013519	rpl29	95	91.803	Maylandia_zebra
ENSGACG00000007041	rpl29	60	91.304	ENSMGAG00000001213	RPL29	82	89.655	Meleagris_gallopavo
ENSGACG00000007041	rpl29	64	79.592	ENSMICG00000049466	-	74	79.592	Microcebus_murinus
ENSGACG00000007041	rpl29	81	88.710	ENSMMOG00000010430	rpl29	97	88.710	Mola_mola
ENSGACG00000007041	rpl29	70	94.444	ENSMALG00000009023	rpl29	81	88.889	Monopterus_albus
ENSGACG00000007041	rpl29	60	93.478	ENSMUSG00000048758	Rpl29	85	91.379	Mus_musculus
ENSGACG00000007041	rpl29	79	91.803	ENSNBRG00000022109	rpl29	95	91.803	Neolamprologus_brichardi
ENSGACG00000007041	rpl29	97	46.914	ENSODEG00000005047	-	55	48.101	Octodon_degus
ENSGACG00000007041	rpl29	79	91.803	ENSONIG00000014377	rpl29	97	91.803	Oreochromis_niloticus
ENSGACG00000007041	rpl29	60	91.304	ENSOCUG00000025179	-	51	70.588	Oryctolagus_cuniculus
ENSGACG00000007041	rpl29	81	90.323	ENSORLG00000023610	rpl29	65	90.323	Oryzias_latipes
ENSGACG00000007041	rpl29	81	90.323	ENSORLG00020018665	rpl29	65	90.323	Oryzias_latipes_hni
ENSGACG00000007041	rpl29	81	90.323	ENSORLG00015014455	rpl29	65	90.323	Oryzias_latipes_hsok
ENSGACG00000007041	rpl29	81	91.935	ENSOMEG00000019919	rpl29	97	91.935	Oryzias_melastigma
ENSGACG00000007041	rpl29	68	71.154	ENSPPRG00000011689	-	80	71.154	Panthera_pardus
ENSGACG00000007041	rpl29	68	69.231	ENSPTIG00000011913	-	63	69.231	Panthera_tigris_altaica
ENSGACG00000007041	rpl29	60	93.478	ENSPTRG00000043237	RPL29	61	94.444	Pan_troglodytes
ENSGACG00000007041	rpl29	60	91.304	ENSPKIG00000025048	rpl29	98	84.615	Paramormyrops_kingsleyae
ENSGACG00000007041	rpl29	75	93.103	ENSPSIG00000014699	RPL29	92	93.103	Pelodiscus_sinensis
ENSGACG00000007041	rpl29	84	81.538	ENSPMGG00000005361	rpl29	96	81.538	Periophthalmus_magnuspinnatus
ENSGACG00000007041	rpl29	79	90.164	ENSPFOG00000011385	rpl29	100	90.164	Poecilia_formosa
ENSGACG00000007041	rpl29	65	94.000	ENSPLAG00000012042	rpl29	95	91.803	Poecilia_latipinna
ENSGACG00000007041	rpl29	65	92.000	ENSPMEG00000018297	rpl29	95	90.164	Poecilia_mexicana
ENSGACG00000007041	rpl29	65	92.000	ENSPREG00000007066	rpl29	95	90.164	Poecilia_reticulata
ENSGACG00000007041	rpl29	79	91.803	ENSPNYG00000019481	rpl29	95	91.803	Pundamilia_nyererei
ENSGACG00000007041	rpl29	77	91.525	ENSPNAG00000007550	rpl29	92	91.525	Pygocentrus_nattereri
ENSGACG00000007041	rpl29	86	78.788	ENSRNOG00000021843	AABR07072463.1	55	78.788	Rattus_norvegicus
ENSGACG00000007041	rpl29	68	84.615	ENSRNOG00000025794	AABR07021239.1	69	84.615	Rattus_norvegicus
ENSGACG00000007041	rpl29	60	76.087	YFR032C-A	RPL29	78	76.087	Saccharomyces_cerevisiae
ENSGACG00000007041	rpl29	70	92.593	ENSSMAG00000013571	rpl29	98	87.302	Scophthalmus_maximus
ENSGACG00000007041	rpl29	65	94.000	ENSSDUG00000016140	rpl29	97	87.097	Seriola_dumerili
ENSGACG00000007041	rpl29	60	68.085	ENSSDUG00000020458	-	76	68.085	Seriola_dumerili
ENSGACG00000007041	rpl29	65	94.000	ENSSLDG00000003932	rpl29	97	87.097	Seriola_lalandi_dorsalis
ENSGACG00000007041	rpl29	75	91.379	ENSSPUG00000003760	RPL29	92	91.379	Sphenodon_punctatus
ENSGACG00000007041	rpl29	70	85.185	ENSSPAG00000020292	rpl29	98	80.952	Stegastes_partitus
ENSGACG00000007041	rpl29	78	61.667	ENSSSCG00000031314	-	96	61.667	Sus_scrofa
ENSGACG00000007041	rpl29	60	86.957	ENSTGUG00000006027	RPL29	92	86.207	Taeniopygia_guttata
ENSGACG00000007041	rpl29	83	81.250	ENSTRUG00000022273	rpl29	98	81.250	Takifugu_rubripes
ENSGACG00000007041	rpl29	69	90.566	ENSTNIG00000014816	rpl29	96	84.615	Tetraodon_nigroviridis
ENSGACG00000007041	rpl29	79	73.770	ENSTBEG00000000807	-	74	73.770	Tupaia_belangeri
ENSGACG00000007041	rpl29	62	89.583	ENSUAMG00000002601	-	84	89.583	Ursus_americanus
ENSGACG00000007041	rpl29	60	86.957	ENSVVUG00000012400	-	100	87.719	Vulpes_vulpes
ENSGACG00000007041	rpl29	60	93.478	ENSXETG00000010811	rpl29	95	78.873	Xenopus_tropicalis
ENSGACG00000007041	rpl29	79	88.525	ENSXCOG00000013543	rpl29	95	88.525	Xiphophorus_couchianus
ENSGACG00000007041	rpl29	79	88.525	ENSXMAG00000020948	rpl29	95	88.525	Xiphophorus_maculatus