EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000007175 (Gene tree)
Gene ID: -
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 8703 bases
Position: chrgroupVI:8344779-8353481
Accession: ZDB-GENE-050706-182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000009512	NUC173	PF08161.12	6.6e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000009532	-	4094	-	ENSGACP00000009512	1288 (aa)	-	G3NVZ3

Gene Model

Click here to download ENSGACG00000007175's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000007175's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000007175	rrp12	92	71.711	ENSG00000052749	RRP12	100	72.727	Homo_sapiens
ENSGACG00000007175	rrp12	99	83.984	ENSAPOG00000013355	rrp12	99	83.969	Acanthochromis_polyacanthus
ENSGACG00000007175	rrp12	99	60.783	ENSAMEG00000000134	RRP12	99	61.206	Ailuropoda_melanoleuca
ENSGACG00000007175	rrp12	99	85.837	ENSACIG00000022673	rrp12	99	85.837	Amphilophus_citrinellus
ENSGACG00000007175	rrp12	99	86.406	ENSAOCG00000016149	rrp12	99	86.406	Amphiprion_ocellaris
ENSGACG00000007175	rrp12	99	84.891	ENSAPEG00000016023	rrp12	99	84.891	Amphiprion_percula
ENSGACG00000007175	rrp12	99	86.271	ENSATEG00000022627	rrp12	99	86.271	Anabas_testudineus
ENSGACG00000007175	rrp12	97	57.416	ENSAPLG00000014387	RRP12	99	57.865	Anas_platyrhynchos
ENSGACG00000007175	rrp12	99	57.793	ENSACAG00000002175	RRP12	99	57.874	Anolis_carolinensis
ENSGACG00000007175	rrp12	92	71.711	ENSANAG00000037485	RRP12	99	71.711	Aotus_nancymaae
ENSGACG00000007175	rrp12	99	84.194	ENSACLG00000007354	rrp12	99	84.194	Astatotilapia_calliptera
ENSGACG00000007175	rrp12	99	74.514	ENSAMXG00000012852	rrp12	99	74.824	Astyanax_mexicanus
ENSGACG00000007175	rrp12	97	70.130	ENSBTAG00000002191	RRP12	99	71.429	Bos_taurus
ENSGACG00000007175	rrp12	85	58.258	ENSCJAG00000016549	-	99	58.850	Callithrix_jacchus
ENSGACG00000007175	rrp12	99	60.629	ENSCAFG00000009043	RRP12	99	60.819	Canis_familiaris
ENSGACG00000007175	rrp12	99	60.629	ENSCAFG00020005991	RRP12	99	60.819	Canis_lupus_dingo
ENSGACG00000007175	rrp12	99	58.333	ENSCHIG00000011876	RRP12	99	58.584	Capra_hircus
ENSGACG00000007175	rrp12	53	52.374	ENSTSYG00000030210	-	98	53.411	Carlito_syrichta
ENSGACG00000007175	rrp12	97	55.183	ENSCAPG00000008991	RRP12	97	55.395	Cavia_aperea
ENSGACG00000007175	rrp12	100	60.462	ENSCPOG00000004215	RRP12	99	60.714	Cavia_porcellus
ENSGACG00000007175	rrp12	79	64.392	ENSCCAG00000024088	RRP12	98	66.038	Cebus_capucinus
ENSGACG00000007175	rrp12	70	56.312	ENSCCAG00000033123	-	82	56.560	Cebus_capucinus
ENSGACG00000007175	rrp12	99	56.572	ENSCATG00000045310	RRP12	99	56.811	Cercocebus_atys
ENSGACG00000007175	rrp12	100	59.985	ENSCLAG00000003753	RRP12	99	60.233	Chinchilla_lanigera
ENSGACG00000007175	rrp12	88	59.095	ENSCSAG00000005877	RRP12	99	59.386	Chlorocebus_sabaeus
ENSGACG00000007175	rrp12	55	68.605	ENSCHOG00000003095	-	60	68.823	Choloepus_hoffmanni
ENSGACG00000007175	rrp12	94	61.779	ENSCPBG00000011935	RRP12	97	61.940	Chrysemys_picta_bellii
ENSGACG00000007175	rrp12	64	39.007	ENSCSAVG00000006059	-	99	39.068	Ciona_savignyi
ENSGACG00000007175	rrp12	92	71.053	ENSCANG00000031653	RRP12	99	71.053	Colobus_angolensis_palliatus
ENSGACG00000007175	rrp12	90	61.007	ENSCGRG00001004338	Rrp12	99	61.235	Cricetulus_griseus_chok1gshd
ENSGACG00000007175	rrp12	99	60.618	ENSCGRG00000011965	Rrp12	99	60.822	Cricetulus_griseus_crigri
ENSGACG00000007175	rrp12	99	82.481	ENSCSEG00000007799	rrp12	99	82.683	Cynoglossus_semilaevis
ENSGACG00000007175	rrp12	99	83.750	ENSCVAG00000003418	rrp12	99	83.750	Cyprinodon_variegatus
ENSGACG00000007175	rrp12	99	71.040	ENSDARG00000022410	rrp12	99	71.562	Danio_rerio
ENSGACG00000007175	rrp12	99	60.108	ENSDNOG00000005120	RRP12	99	60.665	Dasypus_novemcinctus
ENSGACG00000007175	rrp12	99	60.338	ENSDORG00000009199	Rrp12	99	60.836	Dipodomys_ordii
ENSGACG00000007175	rrp12	93	59.091	ENSETEG00000002455	RRP12	93	59.091	Echinops_telfairi
ENSGACG00000007175	rrp12	86	67.188	ENSEBUG00000006555	rrp12	97	50.617	Eptatretus_burgeri
ENSGACG00000007175	rrp12	99	60.662	ENSEASG00005008693	RRP12	99	61.008	Equus_asinus_asinus
ENSGACG00000007175	rrp12	94	60.360	ENSECAG00000010892	RRP12	99	60.809	Equus_caballus
ENSGACG00000007175	rrp12	64	55.588	ENSEEUG00000005447	-	64	55.588	Erinaceus_europaeus
ENSGACG00000007175	rrp12	99	77.364	ENSELUG00000010510	rrp12	100	76.799	Esox_lucius
ENSGACG00000007175	rrp12	97	71.053	ENSFCAG00000028639	RRP12	99	71.053	Felis_catus
ENSGACG00000007175	rrp12	94	60.165	ENSFALG00000008458	RRP12	99	60.747	Ficedula_albicollis
ENSGACG00000007175	rrp12	99	60.123	ENSFDAG00000019108	RRP12	95	60.326	Fukomys_damarensis
ENSGACG00000007175	rrp12	99	75.741	ENSFHEG00000004148	rrp12	99	75.351	Fundulus_heteroclitus
ENSGACG00000007175	rrp12	99	71.030	ENSGMOG00000004188	rrp12	99	71.529	Gadus_morhua
ENSGACG00000007175	rrp12	99	60.541	ENSGALG00000041331	RRP12	96	61.604	Gallus_gallus
ENSGACG00000007175	rrp12	99	83.216	ENSGAFG00000009038	rrp12	99	83.216	Gambusia_affinis
ENSGACG00000007175	rrp12	67	65.167	ENSGAGG00000019169	RRP12	99	62.708	Gopherus_agassizii
ENSGACG00000007175	rrp12	92	71.711	ENSGGOG00000014850	RRP12	99	71.711	Gorilla_gorilla
ENSGACG00000007175	rrp12	99	84.429	ENSHBUG00000023527	rrp12	99	84.429	Haplochromis_burtoni
ENSGACG00000007175	rrp12	99	60.447	ENSHGLG00000016772	RRP12	99	60.870	Heterocephalus_glaber_female
ENSGACG00000007175	rrp12	99	60.447	ENSHGLG00100015110	RRP12	99	60.870	Heterocephalus_glaber_male
ENSGACG00000007175	rrp12	100	79.845	ENSHCOG00000019519	rrp12	99	79.922	Hippocampus_comes
ENSGACG00000007175	rrp12	100	72.854	ENSIPUG00000000311	RRP12	99	73.266	Ictalurus_punctatus
ENSGACG00000007175	rrp12	99	61.218	ENSSTOG00000006515	RRP12	99	61.568	Ictidomys_tridecemlineatus
ENSGACG00000007175	rrp12	96	60.064	ENSJJAG00000000110	Rrp12	98	60.338	Jaculus_jaculus
ENSGACG00000007175	rrp12	99	83.672	ENSKMAG00000020621	rrp12	99	83.672	Kryptolebias_marmoratus
ENSGACG00000007175	rrp12	99	81.960	ENSLBEG00000015335	rrp12	99	82.081	Labrus_bergylta
ENSGACG00000007175	rrp12	72	62.172	ENSLACG00000016633	RRP12	81	62.172	Latimeria_chalumnae
ENSGACG00000007175	rrp12	100	68.083	ENSLOCG00000003846	rrp12	99	68.069	Lepisosteus_oculatus
ENSGACG00000007175	rrp12	99	61.013	ENSLAFG00000015965	RRP12	99	61.206	Loxodonta_africana
ENSGACG00000007175	rrp12	92	71.711	ENSMFAG00000041558	RRP12	99	71.711	Macaca_fascicularis
ENSGACG00000007175	rrp12	92	71.711	ENSMMUG00000019634	RRP12	99	71.711	Macaca_mulatta
ENSGACG00000007175	rrp12	92	71.711	ENSMNEG00000036759	RRP12	99	71.711	Macaca_nemestrina
ENSGACG00000007175	rrp12	92	71.053	ENSMLEG00000041317	RRP12	99	71.053	Mandrillus_leucophaeus
ENSGACG00000007175	rrp12	99	83.984	ENSMAMG00000002964	rrp12	99	86.190	Mastacembelus_armatus
ENSGACG00000007175	rrp12	99	84.272	ENSMZEG00005003241	rrp12	99	84.272	Maylandia_zebra
ENSGACG00000007175	rrp12	99	58.552	ENSMGAG00000009829	RRP12	99	58.883	Meleagris_gallopavo
ENSGACG00000007175	rrp12	99	58.996	ENSMAUG00000020743	Rrp12	99	59.271	Mesocricetus_auratus
ENSGACG00000007175	rrp12	92	73.203	ENSMICG00000007624	RRP12	99	73.203	Microcebus_murinus
ENSGACG00000007175	rrp12	100	61.077	ENSMOCG00000006753	Rrp12	99	61.395	Microtus_ochrogaster
ENSGACG00000007175	rrp12	100	82.946	ENSMMOG00000010708	rrp12	99	83.203	Mola_mola
ENSGACG00000007175	rrp12	99	61.717	ENSMODG00000004315	RRP12	99	61.820	Monodelphis_domestica
ENSGACG00000007175	rrp12	99	78.878	ENSMALG00000016560	rrp12	99	84.882	Monopterus_albus
ENSGACG00000007175	rrp12	99	60.564	MGP_CAROLIEiJ_G0022957	Rrp12	99	60.829	Mus_caroli
ENSGACG00000007175	rrp12	99	61.047	ENSMUSG00000035049	Rrp12	99	61.318	Mus_musculus
ENSGACG00000007175	rrp12	100	61.000	MGP_PahariEiJ_G0014447	Rrp12	99	61.395	Mus_pahari
ENSGACG00000007175	rrp12	99	61.278	MGP_SPRETEiJ_G0023878	Rrp12	99	61.550	Mus_spretus
ENSGACG00000007175	rrp12	99	60.569	ENSMPUG00000017046	RRP12	99	60.913	Mustela_putorius_furo
ENSGACG00000007175	rrp12	99	60.660	ENSMLUG00000017160	RRP12	99	60.849	Myotis_lucifugus
ENSGACG00000007175	rrp12	99	60.709	ENSNGAG00000024144	Rrp12	99	60.900	Nannospalax_galili
ENSGACG00000007175	rrp12	99	83.255	ENSNBRG00000009987	rrp12	99	83.255	Neolamprologus_brichardi
ENSGACG00000007175	rrp12	92	71.053	ENSNLEG00000013762	RRP12	99	71.053	Nomascus_leucogenys
ENSGACG00000007175	rrp12	100	56.723	ENSMEUG00000003185	RRP12	99	57.165	Notamacropus_eugenii
ENSGACG00000007175	rrp12	94	64.226	ENSOPRG00000005001	RRP12	93	64.226	Ochotona_princeps
ENSGACG00000007175	rrp12	100	60.233	ENSODEG00000016439	RRP12	99	60.391	Octodon_degus
ENSGACG00000007175	rrp12	99	84.664	ENSONIG00000009528	rrp12	99	84.664	Oreochromis_niloticus
ENSGACG00000007175	rrp12	100	57.975	ENSOANG00000006560	RRP12	99	58.147	Ornithorhynchus_anatinus
ENSGACG00000007175	rrp12	99	60.524	ENSOCUG00000005662	RRP12	99	61.180	Oryctolagus_cuniculus
ENSGACG00000007175	rrp12	99	82.344	ENSORLG00000008688	rrp12	99	82.881	Oryzias_latipes
ENSGACG00000007175	rrp12	97	82.418	ENSORLG00020002355	rrp12	99	82.418	Oryzias_latipes_hni
ENSGACG00000007175	rrp12	99	82.500	ENSORLG00015006709	rrp12	99	82.500	Oryzias_latipes_hsok
ENSGACG00000007175	rrp12	97	82.896	ENSOMEG00000002609	rrp12	99	82.896	Oryzias_melastigma
ENSGACG00000007175	rrp12	99	59.939	ENSOGAG00000001626	RRP12	99	60.433	Otolemur_garnettii
ENSGACG00000007175	rrp12	99	59.555	ENSOARG00000009681	RRP12	99	59.892	Ovis_aries
ENSGACG00000007175	rrp12	92	71.711	ENSPPAG00000043885	RRP12	99	71.711	Pan_paniscus
ENSGACG00000007175	rrp12	97	71.711	ENSPPRG00000002029	RRP12	99	71.711	Panthera_pardus
ENSGACG00000007175	rrp12	97	71.053	ENSPTIG00000004428	RRP12	99	71.053	Panthera_tigris_altaica
ENSGACG00000007175	rrp12	92	71.711	ENSPTRG00000002806	RRP12	99	71.711	Pan_troglodytes
ENSGACG00000007175	rrp12	92	71.053	ENSPANG00000021360	RRP12	99	71.053	Papio_anubis
ENSGACG00000007175	rrp12	100	71.560	ENSPKIG00000016516	rrp12	99	71.827	Paramormyrops_kingsleyae
ENSGACG00000007175	rrp12	99	79.844	ENSPMGG00000020217	rrp12	99	79.922	Periophthalmus_magnuspinnatus
ENSGACG00000007175	rrp12	100	61.444	ENSPEMG00000008437	Rrp12	99	61.765	Peromyscus_maniculatus_bairdii
ENSGACG00000007175	rrp12	82	54.167	ENSPMAG00000007493	rrp12	81	54.167	Petromyzon_marinus
ENSGACG00000007175	rrp12	96	70.134	ENSPCIG00000002157	RRP12	95	70.134	Phascolarctos_cinereus
ENSGACG00000007175	rrp12	99	83.528	ENSPFOG00000014975	rrp12	99	83.528	Poecilia_formosa
ENSGACG00000007175	rrp12	99	83.528	ENSPLAG00000009840	rrp12	99	83.528	Poecilia_latipinna
ENSGACG00000007175	rrp12	99	83.607	ENSPMEG00000021871	rrp12	99	83.607	Poecilia_mexicana
ENSGACG00000007175	rrp12	99	81.026	ENSPREG00000020950	rrp12	99	81.026	Poecilia_reticulata
ENSGACG00000007175	rrp12	99	60.077	ENSPPYG00000002528	RRP12	99	60.263	Pongo_abelii
ENSGACG00000007175	rrp12	94	73.446	ENSPCAG00000008967	RRP12	94	73.446	Procavia_capensis
ENSGACG00000007175	rrp12	92	72.368	ENSPCOG00000014009	RRP12	99	72.368	Propithecus_coquereli
ENSGACG00000007175	rrp12	99	58.000	ENSPVAG00000003370	RRP12	99	58.249	Pteropus_vampyrus
ENSGACG00000007175	rrp12	99	84.664	ENSPNYG00000009451	rrp12	99	84.664	Pundamilia_nyererei
ENSGACG00000007175	rrp12	93	85.714	ENSPNAG00000007658	rrp12	99	73.865	Pygocentrus_nattereri
ENSGACG00000007175	rrp12	99	60.709	ENSRNOG00000048495	Rrp12	99	61.133	Rattus_norvegicus
ENSGACG00000007175	rrp12	92	71.053	ENSRBIG00000021296	RRP12	99	71.053	Rhinopithecus_bieti
ENSGACG00000007175	rrp12	92	71.053	ENSRROG00000032482	RRP12	99	71.053	Rhinopithecus_roxellana
ENSGACG00000007175	rrp12	92	71.242	ENSSBOG00000030992	RRP12	99	70.395	Saimiri_boliviensis_boliviensis
ENSGACG00000007175	rrp12	99	62.016	ENSSHAG00000018275	RRP12	99	62.120	Sarcophilus_harrisii
ENSGACG00000007175	rrp12	99	73.509	ENSSFOG00015016400	rrp12	99	73.811	Scleropages_formosus
ENSGACG00000007175	rrp12	99	84.922	ENSSMAG00000004047	rrp12	99	85.000	Scophthalmus_maximus
ENSGACG00000007175	rrp12	99	86.953	ENSSDUG00000022871	rrp12	99	86.953	Seriola_dumerili
ENSGACG00000007175	rrp12	99	86.797	ENSSLDG00000003038	rrp12	99	86.797	Seriola_lalandi_dorsalis
ENSGACG00000007175	rrp12	100	60.108	ENSSPUG00000012221	RRP12	99	60.264	Sphenodon_punctatus
ENSGACG00000007175	rrp12	99	86.328	ENSSPAG00000002261	rrp12	99	86.328	Stegastes_partitus
ENSGACG00000007175	rrp12	100	59.800	ENSSSCG00000010514	RRP12	99	60.186	Sus_scrofa
ENSGACG00000007175	rrp12	89	57.565	ENSTGUG00000009711	RRP12	99	58.019	Taeniopygia_guttata
ENSGACG00000007175	rrp12	100	78.183	ENSTRUG00000012017	rrp12	99	77.934	Takifugu_rubripes
ENSGACG00000007175	rrp12	100	82.997	ENSTNIG00000016522	rrp12	99	83.020	Tetraodon_nigroviridis
ENSGACG00000007175	rrp12	78	72.059	ENSTBEG00000004907	RRP12	80	72.059	Tupaia_belangeri
ENSGACG00000007175	rrp12	100	58.276	ENSTTRG00000009878	RRP12	99	58.573	Tursiops_truncatus
ENSGACG00000007175	rrp12	99	60.706	ENSUAMG00000009092	RRP12	99	60.896	Ursus_americanus
ENSGACG00000007175	rrp12	99	59.397	ENSUMAG00000021621	RRP12	99	59.642	Ursus_maritimus
ENSGACG00000007175	rrp12	99	60.883	ENSVVUG00000023168	RRP12	99	60.883	Vulpes_vulpes
ENSGACG00000007175	rrp12	99	64.114	ENSXETG00000003430	rrp12	99	64.280	Xenopus_tropicalis
ENSGACG00000007175	rrp12	90	83.333	ENSXCOG00000012082	rrp12	100	81.146	Xiphophorus_couchianus
ENSGACG00000007175	rrp12	99	83.685	ENSXMAG00000013498	rrp12	99	83.607	Xiphophorus_maculatus