EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGACG00000007179 (Gene tree)
Gene ID
-
Gene Symbol
pabpc4
Alias
cb12|sb:cb12
Full Name
poly(A) binding protein%2C cytoplasmic 4 (inducible form)
Gene Type
protein_coding
Species
Gasterosteus_aculeatus
Status
putative
Strand
Minus strand
Length
7296 bases
Position
chrgroupXV:4121202-4128497
Accession
ZDB-GENE-030131-9663
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGACP00000009506PABPPF00658.185.5e-3111
ENSGACP00000009539PABPPF00658.185.7e-3111
ENSGACP00000009506RRM_5PF13893.61e-0811
ENSGACP00000009539RRM_5PF13893.61.1e-0811
ENSGACP00000009506RRM_1PF00076.221.4e-8914
ENSGACP00000009506RRM_1PF00076.221.4e-8924
ENSGACP00000009506RRM_1PF00076.221.4e-8934
ENSGACP00000009506RRM_1PF00076.221.4e-8944
ENSGACP00000009539RRM_1PF00076.221.5e-8914
ENSGACP00000009539RRM_1PF00076.221.5e-8924
ENSGACP00000009539RRM_1PF00076.221.5e-8934
ENSGACP00000009539RRM_1PF00076.221.5e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGACT00000009526-2687-ENSGACP00000009506627 (aa)-G3NVY7
ENSGACT00000009559-2696-ENSGACP00000009539636 (aa)-G3NW20
Gene Model
Click here to download ENSGACG00000007179's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000007179's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGACG00000007179pabpc45830.488ENSGACG00000001443trnau1apa7031.056
ENSGACG00000007179pabpc45936.145ENSGACG00000013839elavl39236.145
ENSGACG00000007179pabpc410075.351ENSGACG00000003572pabpc1a9974.883
ENSGACG00000007179pabpc45831.395ENSGACG00000019028rbm14b7131.395
ENSGACG00000007179pabpc49874.568ENSGACG00000003771pabpc1b9974.448
ENSGACG00000007179pabpc46034.940ENSGACG00000011152elavl48934.940
ENSGACG00000007179pabpc45236.364ENSGACG00000011707celf3b6636.364
ENSGACG00000007179pabpc45938.889ENSGACG00000002797rbm39b5137.349
ENSGACG00000007179pabpc49766.986ENSGACG00000002792pabpc1l9966.507
ENSGACG00000007179pabpc45732.450ENSGACG00000013329-8532.450
ENSGACG00000007179pabpc46036.145ENSGACG00000019484elavl29236.145
ENSGACG00000007179pabpc45733.133ENSGACG00000008970ncl5632.738
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGACG00000007179pabpc410083.439ENSG00000090621PABPC49996.396Homo_sapiens
ENSGACG00000007179pabpc49994.984ENSAPOG00000001161pabpc410094.896Acanthochromis_polyacanthus
ENSGACG00000007179pabpc410078.625ENSAMEG00000011535-10078.027Ailuropoda_melanoleuca
ENSGACG00000007179pabpc49849.518ENSAMEG00000015083-9948.875Ailuropoda_melanoleuca
ENSGACG00000007179pabpc410093.829ENSACIG00000023343pabpc410093.829Amphilophus_citrinellus
ENSGACG00000007179pabpc49994.984ENSAOCG00000021529pabpc410094.896Amphiprion_ocellaris
ENSGACG00000007179pabpc49994.984ENSAPEG00000019196pabpc410094.896Amphiprion_percula
ENSGACG00000007179pabpc49994.507ENSATEG00000007402pabpc410094.268Anabas_testudineus
ENSGACG00000007179pabpc49885.120ENSAPLG00000009729-9984.480Anas_platyrhynchos
ENSGACG00000007179pabpc49883.333ENSACAG00000002544PABPC49982.092Anolis_carolinensis
ENSGACG00000007179pabpc410082.059ENSANAG00000025079PABPC410081.435Aotus_nancymaae
ENSGACG00000007179pabpc410094.418ENSACLG00000019558pabpc410094.418Astatotilapia_calliptera
ENSGACG00000007179pabpc49984.177ENSAMXG00000018779pabpc49984.177Astyanax_mexicanus
ENSGACG00000007179pabpc410080.335ENSBTAG00000017125PABPC410079.969Bos_taurus
ENSGACG00000007179pabpc45884.431ENSBTAG00000048536-9384.431Bos_taurus
ENSGACG00000007179pabpc47379.111ENSCJAG00000045953-9771.484Callithrix_jacchus
ENSGACG00000007179pabpc410082.059ENSCJAG00000002512-10081.435Callithrix_jacchus
ENSGACG00000007179pabpc410082.215ENSCAFG00000003081PABPC410081.591Canis_familiaris
ENSGACG00000007179pabpc410078.774ENSCAFG00020004161PABPC410078.176Canis_lupus_dingo
ENSGACG00000007179pabpc410064.451ENSCHIG00000023385-10063.988Capra_hircus
ENSGACG00000007179pabpc410078.625ENSCHIG00000019398-10077.877Capra_hircus
ENSGACG00000007179pabpc410082.215ENSTSYG00000006532PABPC410081.591Carlito_syrichta
ENSGACG00000007179pabpc49981.949ENSCAPG00000015984PABPC410081.348Cavia_aperea
ENSGACG00000007179pabpc410082.243ENSCPOG00000009552PABPC410081.719Cavia_porcellus
ENSGACG00000007179pabpc410082.059ENSCCAG00000037306PABPC410081.435Cebus_capucinus
ENSGACG00000007179pabpc410082.215ENSCATG00000042164PABPC410081.591Cercocebus_atys
ENSGACG00000007179pabpc410082.243ENSCLAG00000011899PABPC410081.719Chinchilla_lanigera
ENSGACG00000007179pabpc410078.838ENSCSAG00000001135PABPC410078.027Chlorocebus_sabaeus
ENSGACG00000007179pabpc48788.158ENSCHOG00000005327PABPC47988.679Choloepus_hoffmanni
ENSGACG00000007179pabpc49985.016ENSCPBG00000001038PABPC49984.385Chrysemys_picta_bellii
ENSGACG00000007179pabpc49982.595ENSCANG00000034177PABPC410081.962Colobus_angolensis_palliatus
ENSGACG00000007179pabpc49884.065ENSCGRG00001018166Pabpc410082.962Cricetulus_griseus_chok1gshd
ENSGACG00000007179pabpc49784.488ENSCGRG00000009777Pabpc410083.360Cricetulus_griseus_crigri
ENSGACG00000007179pabpc410094.099ENSCSEG00000000130pabpc410094.099Cynoglossus_semilaevis
ENSGACG00000007179pabpc49993.506ENSCVAG00000019246pabpc410093.506Cyprinodon_variegatus
ENSGACG00000007179pabpc49891.242ENSDARG00000059259pabpc410090.744Danio_rerio
ENSGACG00000007179pabpc49981.228ENSDNOG00000018444-10080.526Dasypus_novemcinctus
ENSGACG00000007179pabpc410080.763ENSDORG00000011581Pabpc410080.245Dipodomys_ordii
ENSGACG00000007179pabpc48553.394ENSETEG00000009172-9952.381Echinops_telfairi
ENSGACG00000007179pabpc410089.062ENSETEG00000018453-8489.062Echinops_telfairi
ENSGACG00000007179pabpc49975.556ENSEBUG00000000992pabpc410075.238Eptatretus_burgeri
ENSGACG00000007179pabpc49776.461ENSEBUG00000013782pabpc49976.433Eptatretus_burgeri
ENSGACG00000007179pabpc410078.774ENSEASG00005014119PABPC410078.027Equus_asinus_asinus
ENSGACG00000007179pabpc410078.774ENSECAG00000009396PABPC410078.027Equus_caballus
ENSGACG00000007179pabpc49778.407ENSEEUG00000002962PABPC410077.280Erinaceus_europaeus
ENSGACG00000007179pabpc49891.097ENSELUG00000003195pabpc410090.469Esox_lucius
ENSGACG00000007179pabpc410082.215ENSFCAG00000015254-10081.591Felis_catus
ENSGACG00000007179pabpc49984.543ENSFALG00000000543PABPC49984.044Ficedula_albicollis
ENSGACG00000007179pabpc49050.936ENSFDAG00000010581-10049.744Fukomys_damarensis
ENSGACG00000007179pabpc410078.869ENSFDAG00000020016-10078.358Fukomys_damarensis
ENSGACG00000007179pabpc49993.770ENSFHEG00000007548pabpc410093.770Fundulus_heteroclitus
ENSGACG00000007179pabpc410090.767ENSGMOG00000019025pabpc410090.596Gadus_morhua
ENSGACG00000007179pabpc49985.039ENSGALG00000003800PABPC49984.409Gallus_gallus
ENSGACG00000007179pabpc49995.933ENSGAFG00000018195pabpc49898.333Gambusia_affinis
ENSGACG00000007179pabpc49985.489ENSGAGG00000001888PABPC49984.858Gopherus_agassizii
ENSGACG00000007179pabpc410082.059ENSGGOG00000004002PABPC410081.435Gorilla_gorilla
ENSGACG00000007179pabpc410094.418ENSHBUG00000020206pabpc410094.418Haplochromis_burtoni
ENSGACG00000007179pabpc410082.087ENSHGLG00000011162PABPC410081.562Heterocephalus_glaber_female
ENSGACG00000007179pabpc410082.087ENSHGLG00100001580PABPC410081.562Heterocephalus_glaber_male
ENSGACG00000007179pabpc410093.301ENSHCOG00000012694pabpc410093.461Hippocampus_comes
ENSGACG00000007179pabpc49790.821ENSIPUG00000016620pabpc410089.590Ictalurus_punctatus
ENSGACG00000007179pabpc410083.439ENSSTOG00000010416PABPC410082.803Ictidomys_tridecemlineatus
ENSGACG00000007179pabpc410079.358ENSJJAG00000007781Pabpc410078.867Jaculus_jaculus
ENSGACG00000007179pabpc49992.504ENSKMAG00000013597pabpc410092.504Kryptolebias_marmoratus
ENSGACG00000007179pabpc410093.651ENSLBEG00000013654pabpc410093.651Labrus_bergylta
ENSGACG00000007179pabpc49985.220ENSLACG00000011907PABPC49984.748Latimeria_chalumnae
ENSGACG00000007179pabpc410089.202ENSLOCG00000001877pabpc410089.202Lepisosteus_oculatus
ENSGACG00000007179pabpc410083.758ENSLAFG00000000151PABPC410083.121Loxodonta_africana
ENSGACG00000007179pabpc410082.215ENSMFAG00000041481PABPC410081.591Macaca_fascicularis
ENSGACG00000007179pabpc410078.838ENSMMUG00000007497PABPC410078.027Macaca_mulatta
ENSGACG00000007179pabpc410082.215ENSMNEG00000043054PABPC410081.591Macaca_nemestrina
ENSGACG00000007179pabpc410082.215ENSMLEG00000040716PABPC410081.591Mandrillus_leucophaeus
ENSGACG00000007179pabpc49995.307ENSMAMG00000010025pabpc410094.737Mastacembelus_armatus
ENSGACG00000007179pabpc410094.418ENSMZEG00005006141pabpc410094.418Maylandia_zebra
ENSGACG00000007179pabpc49882.264ENSMGAG00000005408PABPC49980.912Meleagris_gallopavo
ENSGACG00000007179pabpc47277.619ENSMAUG00000001295-9776.667Mesocricetus_auratus
ENSGACG00000007179pabpc45880.702ENSMAUG00000004089-9280.702Mesocricetus_auratus
ENSGACG00000007179pabpc47789.583ENSMAUG00000019763-8486.239Mesocricetus_auratus
ENSGACG00000007179pabpc49973.929ENSMICG00000036729-10073.214Microcebus_murinus
ENSGACG00000007179pabpc48883.183ENSMICG00000016633-10082.523Microcebus_murinus
ENSGACG00000007179pabpc410082.643ENSMOCG00000006763Pabpc410082.006Microtus_ochrogaster
ENSGACG00000007179pabpc410090.750ENSMMOG00000002363pabpc410090.431Mola_mola
ENSGACG00000007179pabpc49782.126ENSMODG00000017657-9980.909Monodelphis_domestica
ENSGACG00000007179pabpc46070.400ENSMODG00000018051-9670.400Monodelphis_domestica
ENSGACG00000007179pabpc49994.355ENSMALG00000011017pabpc410093.959Monopterus_albus
ENSGACG00000007179pabpc49971.552MGP_CAROLIEiJ_G0024864-10072.408Mus_caroli
ENSGACG00000007179pabpc410078.423MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSGACG00000007179pabpc410083.280ENSMUSG00000011257Pabpc410094.048Mus_musculus
ENSGACG00000007179pabpc49979.035MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSGACG00000007179pabpc49969.565MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSGACG00000007179pabpc410078.774ENSMPUG00000014414-10078.176Mustela_putorius_furo
ENSGACG00000007179pabpc49546.053ENSMPUG00000006836-10045.230Mustela_putorius_furo
ENSGACG00000007179pabpc410083.439ENSMLUG00000012068PABPC410082.803Myotis_lucifugus
ENSGACG00000007179pabpc410083.599ENSNGAG00000018292Pabpc410082.962Nannospalax_galili
ENSGACG00000007179pabpc46097.596ENSNBRG00000009708pabpc49897.596Neolamprologus_brichardi
ENSGACG00000007179pabpc46595.783ENSNBRG00000010047-7295.783Neolamprologus_brichardi
ENSGACG00000007179pabpc410082.215ENSNLEG00000011928PABPC410081.591Nomascus_leucogenys
ENSGACG00000007179pabpc48592.063ENSOPRG00000011984PABPC48692.063Ochotona_princeps
ENSGACG00000007179pabpc49973.292ENSODEG00000017434-10072.671Octodon_degus
ENSGACG00000007179pabpc45382.857ENSODEG00000013457-10082.857Octodon_degus
ENSGACG00000007179pabpc410081.931ENSODEG00000006592-10081.250Octodon_degus
ENSGACG00000007179pabpc410094.099ENSONIG00000008176pabpc410094.099Oreochromis_niloticus
ENSGACG00000007179pabpc49984.567ENSOANG00000010001PABPC49983.937Ornithorhynchus_anatinus
ENSGACG00000007179pabpc49578.964ENSOCUG00000000562PABPC48878.179Oryctolagus_cuniculus
ENSGACG00000007179pabpc49995.679ENSORLG00000017479pabpc49995.385Oryzias_latipes
ENSGACG00000007179pabpc49995.679ENSORLG00020018644pabpc49995.385Oryzias_latipes_hni
ENSGACG00000007179pabpc49995.679ENSORLG00015015042pabpc49995.385Oryzias_latipes_hsok
ENSGACG00000007179pabpc49994.498ENSOMEG00000014410pabpc410094.268Oryzias_melastigma
ENSGACG00000007179pabpc410080.183ENSOGAG00000004067PABPC410079.726Otolemur_garnettii
ENSGACG00000007179pabpc410078.625ENSOARG00000020060PABPC410077.877Ovis_aries
ENSGACG00000007179pabpc410082.059ENSPPAG00000043625PABPC410081.435Pan_paniscus
ENSGACG00000007179pabpc410082.215ENSPPRG00000024727PABPC410081.591Panthera_pardus
ENSGACG00000007179pabpc410082.215ENSPTIG00000005829PABPC410081.591Panthera_tigris_altaica
ENSGACG00000007179pabpc410082.059ENSPTRG00000000573PABPC410081.435Pan_troglodytes
ENSGACG00000007179pabpc410082.215ENSPANG00000009484PABPC410081.591Papio_anubis
ENSGACG00000007179pabpc410088.263ENSPKIG00000025356pabpc410088.245Paramormyrops_kingsleyae
ENSGACG00000007179pabpc49985.354ENSPSIG00000016892PABPC49984.724Pelodiscus_sinensis
ENSGACG00000007179pabpc410089.633ENSPMGG00000009073pabpc410088.676Periophthalmus_magnuspinnatus
ENSGACG00000007179pabpc410079.876ENSPEMG00000024193-10079.348Peromyscus_maniculatus_bairdii
ENSGACG00000007179pabpc410082.555ENSPEMG00000023569-10081.903Peromyscus_maniculatus_bairdii
ENSGACG00000007179pabpc49574.370ENSPMAG00000007885pabpc410073.523Petromyzon_marinus
ENSGACG00000007179pabpc48875.436ENSPMAG00000002836pabpc410076.481Petromyzon_marinus
ENSGACG00000007179pabpc49692.874ENSPCIG00000020674PABPC49993.447Phascolarctos_cinereus
ENSGACG00000007179pabpc49992.812ENSPFOG00000002682pabpc410092.812Poecilia_formosa
ENSGACG00000007179pabpc49992.971ENSPLAG00000010112pabpc410092.971Poecilia_latipinna
ENSGACG00000007179pabpc49893.669ENSPMEG00000019739pabpc410092.971Poecilia_mexicana
ENSGACG00000007179pabpc49993.291ENSPREG00000001589pabpc410093.291Poecilia_reticulata
ENSGACG00000007179pabpc410078.689ENSPPYG00000001506PABPC410077.877Pongo_abelii
ENSGACG00000007179pabpc410074.141ENSPCAG00000003341PABPC410073.393Procavia_capensis
ENSGACG00000007179pabpc410081.522ENSPCOG00000023725-10081.464Propithecus_coquereli
ENSGACG00000007179pabpc49969.159ENSPCOG00000025882-9581.905Propithecus_coquereli
ENSGACG00000007179pabpc49877.851ENSPVAG00000002187PABPC410077.152Pteropus_vampyrus
ENSGACG00000007179pabpc410094.418ENSPNYG00000006134pabpc410094.418Pundamilia_nyererei
ENSGACG00000007179pabpc49991.284ENSPNAG00000024355pabpc410091.284Pygocentrus_nattereri
ENSGACG00000007179pabpc410080.611ENSRNOG00000015642Pabpc410080.092Rattus_norvegicus
ENSGACG00000007179pabpc410078.473ENSRNOG00000028592AABR07035074.110077.948Rattus_norvegicus
ENSGACG00000007179pabpc410082.215ENSRBIG00000039761PABPC410081.591Rhinopithecus_bieti
ENSGACG00000007179pabpc410082.215ENSRROG00000033355PABPC410081.591Rhinopithecus_roxellana
ENSGACG00000007179pabpc410082.059ENSSBOG00000026193PABPC410081.435Saimiri_boliviensis_boliviensis
ENSGACG00000007179pabpc49785.393ENSSHAG00000018139PABPC49984.069Sarcophilus_harrisii
ENSGACG00000007179pabpc49989.233ENSSFOG00015023514pabpc410089.052Scleropages_formosus
ENSGACG00000007179pabpc410094.577ENSSMAG00000009007pabpc410094.577Scophthalmus_maximus
ENSGACG00000007179pabpc49995.307ENSSDUG00000012683pabpc410094.896Seriola_dumerili
ENSGACG00000007179pabpc49995.307ENSSLDG00000013025pabpc410094.896Seriola_lalandi_dorsalis
ENSGACG00000007179pabpc410072.496ENSSARG00000000310PABPC410071.749Sorex_araneus
ENSGACG00000007179pabpc49985.669ENSSPUG00000003204PABPC49985.032Sphenodon_punctatus
ENSGACG00000007179pabpc49995.793ENSSPAG00000009252pabpc410095.694Stegastes_partitus
ENSGACG00000007179pabpc410082.215ENSSSCG00000003660-10081.591Sus_scrofa
ENSGACG00000007179pabpc48844.107ENSSSCG00000036170-9644.107Sus_scrofa
ENSGACG00000007179pabpc49980.120ENSTGUG00000001266PABPC49980.422Taeniopygia_guttata
ENSGACG00000007179pabpc410092.663ENSTRUG00000005907pabpc410092.663Takifugu_rubripes
ENSGACG00000007179pabpc410086.443ENSTNIG00000016902pabpc410086.124Tetraodon_nigroviridis
ENSGACG00000007179pabpc49967.822ENSTBEG00000009035PABPC410067.107Tupaia_belangeri
ENSGACG00000007179pabpc49958.319ENSTTRG00000014340PABPC410066.556Tursiops_truncatus
ENSGACG00000007179pabpc410082.215ENSUAMG00000000303PABPC410081.591Ursus_americanus
ENSGACG00000007179pabpc410088.209ENSUMAG00000019585PABPC49990.602Ursus_maritimus
ENSGACG00000007179pabpc47869.027ENSVPAG00000010041PABPC47369.027Vicugna_pacos
ENSGACG00000007179pabpc410082.215ENSVVUG00000005215PABPC410081.591Vulpes_vulpes
ENSGACG00000007179pabpc49981.732ENSXETG00000010946pabpc49980.915Xenopus_tropicalis
ENSGACG00000007179pabpc46295.833ENSXETG00000027221-10095.833Xenopus_tropicalis
ENSGACG00000007179pabpc49995.778ENSXCOG00000013190pabpc49694.811Xiphophorus_couchianus
ENSGACG00000007179pabpc49992.971ENSXMAG00000019007pabpc410092.971Xiphophorus_maculatus

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