EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000007199 (Gene tree)
Gene ID: -
Gene Symbol: gpatch3
Alias: zgc:158863
Full Name: G patch domain containing 3
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3623 bases
Position: chrgroupXX:8135878-8139500
Accession: ZDB-GENE-070112-902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000009546	G-patch	PF01585.23	2.8e-08	1	1
ENSGACP00000009562	G-patch	PF01585.23	4.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000009582	-	1581	-	ENSGACP00000009562	517 (aa)	-	G3NW43
ENSGACT00000009566	-	1497	-	ENSGACP00000009546	426 (aa)	-	G3NW27

Gene Model

Click here to download ENSGACG00000007199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000007199's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000007199	gpatch3	97	54.651	ENSG00000198746	GPATCH3	82	70.968	Homo_sapiens
ENSGACG00000007199	gpatch3	100	78.613	ENSAPOG00000001212	gpatch3	100	78.571	Acanthochromis_polyacanthus
ENSGACG00000007199	gpatch3	97	56.250	ENSAMEG00000010801	GPATCH3	95	55.859	Ailuropoda_melanoleuca
ENSGACG00000007199	gpatch3	100	79.537	ENSAOCG00000019352	gpatch3	100	79.730	Amphiprion_ocellaris
ENSGACG00000007199	gpatch3	100	77.969	ENSAPEG00000018926	gpatch3	100	78.736	Amphiprion_percula
ENSGACG00000007199	gpatch3	100	77.756	ENSATEG00000023759	gpatch3	99	77.756	Anabas_testudineus
ENSGACG00000007199	gpatch3	68	64.507	ENSAPLG00000010745	GPATCH3	100	63.277	Anas_platyrhynchos
ENSGACG00000007199	gpatch3	96	54.247	ENSACAG00000016709	GPATCH3	94	54.440	Anolis_carolinensis
ENSGACG00000007199	gpatch3	97	55.212	ENSANAG00000035944	GPATCH3	97	55.598	Aotus_nancymaae
ENSGACG00000007199	gpatch3	100	78.337	ENSACLG00000012807	gpatch3	99	78.143	Astatotilapia_calliptera
ENSGACG00000007199	gpatch3	99	61.197	ENSAMXG00000034582	gpatch3	99	61.197	Astyanax_mexicanus
ENSGACG00000007199	gpatch3	97	55.773	ENSBTAG00000014849	GPATCH3	96	54.990	Bos_taurus
ENSGACG00000007199	gpatch3	100	40.659	WBGene00019467	K07B1.7	93	36.754	Caenorhabditis_elegans
ENSGACG00000007199	gpatch3	97	54.864	ENSCJAG00000010000	GPATCH3	95	54.864	Callithrix_jacchus
ENSGACG00000007199	gpatch3	97	55.773	ENSCAFG00000012265	GPATCH3	95	55.577	Canis_familiaris
ENSGACG00000007199	gpatch3	97	55.773	ENSCAFG00020021640	GPATCH3	95	55.577	Canis_lupus_dingo
ENSGACG00000007199	gpatch3	97	54.599	ENSCHIG00000024245	GPATCH3	94	53.816	Capra_hircus
ENSGACG00000007199	gpatch3	97	54.159	ENSTSYG00000011753	GPATCH3	95	56.093	Carlito_syrichta
ENSGACG00000007199	gpatch3	62	59.926	ENSCAPG00000007313	GPATCH3	94	58.055	Cavia_aperea
ENSGACG00000007199	gpatch3	97	55.620	ENSCPOG00000010404	GPATCH3	95	56.395	Cavia_porcellus
ENSGACG00000007199	gpatch3	97	55.106	ENSCCAG00000030482	GPATCH3	97	54.721	Cebus_capucinus
ENSGACG00000007199	gpatch3	97	52.326	ENSCATG00000033598	GPATCH3	95	53.295	Cercocebus_atys
ENSGACG00000007199	gpatch3	96	56.436	ENSCLAG00000012064	GPATCH3	95	55.945	Chinchilla_lanigera
ENSGACG00000007199	gpatch3	97	55.777	ENSCPBG00000024968	GPATCH3	94	56.175	Chrysemys_picta_bellii
ENSGACG00000007199	gpatch3	97	53.295	ENSCANG00000036795	GPATCH3	95	54.264	Colobus_angolensis_palliatus
ENSGACG00000007199	gpatch3	97	54.921	ENSCGRG00001002930	Gpatch3	95	56.299	Cricetulus_griseus_chok1gshd
ENSGACG00000007199	gpatch3	97	54.921	ENSCGRG00000004699	Gpatch3	95	56.299	Cricetulus_griseus_crigri
ENSGACG00000007199	gpatch3	100	73.805	ENSCSEG00000005277	gpatch3	100	73.805	Cynoglossus_semilaevis
ENSGACG00000007199	gpatch3	100	75.869	ENSCVAG00000000827	gpatch3	100	75.869	Cyprinodon_variegatus
ENSGACG00000007199	gpatch3	93	78.899	ENSDARG00000052747	gpatch3	69	78.899	Danio_rerio
ENSGACG00000007199	gpatch3	97	55.106	ENSDNOG00000016999	GPATCH3	95	54.913	Dasypus_novemcinctus
ENSGACG00000007199	gpatch3	97	46.050	ENSEBUG00000013911	gpatch3	92	46.422	Eptatretus_burgeri
ENSGACG00000007199	gpatch3	97	55.078	ENSEASG00005008636	GPATCH3	95	55.273	Equus_asinus_asinus
ENSGACG00000007199	gpatch3	97	55.273	ENSECAG00000007653	GPATCH3	95	55.469	Equus_caballus
ENSGACG00000007199	gpatch3	99	67.113	ENSELUG00000000963	gpatch3	99	66.539	Esox_lucius
ENSGACG00000007199	gpatch3	98	55.361	ENSFCAG00000012819	GPATCH3	96	55.361	Felis_catus
ENSGACG00000007199	gpatch3	66	65.052	ENSFALG00000000319	GPATCH3	91	60.694	Ficedula_albicollis
ENSGACG00000007199	gpatch3	97	54.175	ENSFDAG00000016270	GPATCH3	95	55.146	Fukomys_damarensis
ENSGACG00000007199	gpatch3	100	75.337	ENSFHEG00000015264	gpatch3	100	75.145	Fundulus_heteroclitus
ENSGACG00000007199	gpatch3	100	71.180	ENSGMOG00000000991	gpatch3	100	71.373	Gadus_morhua
ENSGACG00000007199	gpatch3	96	55.159	ENSGALG00000000881	GPATCH3	93	54.762	Gallus_gallus
ENSGACG00000007199	gpatch3	98	74.755	ENSGAFG00000002531	gpatch3	99	74.755	Gambusia_affinis
ENSGACG00000007199	gpatch3	97	55.731	ENSGAGG00000023286	GPATCH3	94	55.578	Gopherus_agassizii
ENSGACG00000007199	gpatch3	97	54.511	ENSGGOG00000015305	GPATCH3	95	55.470	Gorilla_gorilla
ENSGACG00000007199	gpatch3	100	77.950	ENSHBUG00000020513	gpatch3	98	83.754	Haplochromis_burtoni
ENSGACG00000007199	gpatch3	98	53.950	ENSHGLG00000012492	GPATCH3	97	54.913	Heterocephalus_glaber_female
ENSGACG00000007199	gpatch3	98	53.950	ENSHGLG00100016909	GPATCH3	97	54.913	Heterocephalus_glaber_male
ENSGACG00000007199	gpatch3	98	74.364	ENSHCOG00000005739	gpatch3	99	74.168	Hippocampus_comes
ENSGACG00000007199	gpatch3	97	64.729	ENSIPUG00000007697	gpatch3	99	72.086	Ictalurus_punctatus
ENSGACG00000007199	gpatch3	97	56.673	ENSSTOG00000015220	GPATCH3	95	56.673	Ictidomys_tridecemlineatus
ENSGACG00000007199	gpatch3	97	55.534	ENSJJAG00000003292	Gpatch3	95	55.534	Jaculus_jaculus
ENSGACG00000007199	gpatch3	100	75.670	ENSKMAG00000020717	gpatch3	100	75.479	Kryptolebias_marmoratus
ENSGACG00000007199	gpatch3	99	76.437	ENSLBEG00000007046	gpatch3	99	77.692	Labrus_bergylta
ENSGACG00000007199	gpatch3	91	71.495	ENSLACG00000011400	GPATCH3	79	71.495	Latimeria_chalumnae
ENSGACG00000007199	gpatch3	99	62.885	ENSLOCG00000003858	gpatch3	99	62.885	Lepisosteus_oculatus
ENSGACG00000007199	gpatch3	97	54.951	ENSLAFG00000016691	GPATCH3	96	54.951	Loxodonta_africana
ENSGACG00000007199	gpatch3	97	53.398	ENSMFAG00000030918	GPATCH3	95	54.757	Macaca_fascicularis
ENSGACG00000007199	gpatch3	97	53.204	ENSMMUG00000018723	GPATCH3	95	54.669	Macaca_mulatta
ENSGACG00000007199	gpatch3	92	45.475	ENSMNEG00000033889	GPATCH3	94	45.916	Macaca_nemestrina
ENSGACG00000007199	gpatch3	97	53.551	ENSMLEG00000033364	GPATCH3	95	54.615	Mandrillus_leucophaeus
ENSGACG00000007199	gpatch3	100	77.369	ENSMAMG00000023975	gpatch3	100	77.369	Mastacembelus_armatus
ENSGACG00000007199	gpatch3	100	78.337	ENSMZEG00005019731	gpatch3	99	78.143	Maylandia_zebra
ENSGACG00000007199	gpatch3	67	63.218	ENSMGAG00000000813	GPATCH3	92	62.069	Meleagris_gallopavo
ENSGACG00000007199	gpatch3	97	54.894	ENSMAUG00000002005	Gpatch3	95	55.598	Mesocricetus_auratus
ENSGACG00000007199	gpatch3	97	55.253	ENSMICG00000015656	GPATCH3	95	54.864	Microcebus_murinus
ENSGACG00000007199	gpatch3	97	57.004	ENSMOCG00000022375	Gpatch3	95	57.393	Microtus_ochrogaster
ENSGACG00000007199	gpatch3	68	80.627	ENSMMOG00000008963	gpatch3	96	80.802	Mola_mola
ENSGACG00000007199	gpatch3	97	54.706	ENSMODG00000014417	GPATCH3	93	54.706	Monodelphis_domestica
ENSGACG00000007199	gpatch3	100	78.035	ENSMALG00000007586	gpatch3	100	77.457	Monopterus_albus
ENSGACG00000007199	gpatch3	97	58.008	MGP_CAROLIEiJ_G0026594	Gpatch3	95	57.227	Mus_caroli
ENSGACG00000007199	gpatch3	97	57.617	ENSMUSG00000028850	Gpatch3	95	57.617	Mus_musculus
ENSGACG00000007199	gpatch3	96	57.228	MGP_PahariEiJ_G0028927	Gpatch3	94	58.858	Mus_pahari
ENSGACG00000007199	gpatch3	97	57.617	MGP_SPRETEiJ_G0027575	Gpatch3	99	61.207	Mus_spretus
ENSGACG00000007199	gpatch3	97	54.883	ENSMPUG00000015665	GPATCH3	95	55.664	Mustela_putorius_furo
ENSGACG00000007199	gpatch3	97	53.816	ENSMLUG00000023528	GPATCH3	95	54.795	Myotis_lucifugus
ENSGACG00000007199	gpatch3	97	54.406	ENSNGAG00000006821	Gpatch3	95	54.143	Nannospalax_galili
ENSGACG00000007199	gpatch3	100	71.180	ENSNBRG00000000365	gpatch3	99	71.180	Neolamprologus_brichardi
ENSGACG00000007199	gpatch3	91	54.697	ENSNLEG00000009387	GPATCH3	92	54.280	Nomascus_leucogenys
ENSGACG00000007199	gpatch3	97	54.207	ENSMEUG00000003236	GPATCH3	93	54.070	Notamacropus_eugenii
ENSGACG00000007199	gpatch3	97	56.751	ENSOPRG00000016429	GPATCH3	95	56.556	Ochotona_princeps
ENSGACG00000007199	gpatch3	97	55.385	ENSODEG00000003292	GPATCH3	95	55.577	Octodon_degus
ENSGACG00000007199	gpatch3	100	79.304	ENSONIG00000006771	gpatch3	99	79.497	Oreochromis_niloticus
ENSGACG00000007199	gpatch3	91	55.556	ENSOCUG00000006411	GPATCH3	95	54.741	Oryctolagus_cuniculus
ENSGACG00000007199	gpatch3	100	72.106	ENSORLG00000004435	gpatch3	100	72.296	Oryzias_latipes
ENSGACG00000007199	gpatch3	100	73.019	ENSORLG00020022609	gpatch3	100	73.019	Oryzias_latipes_hni
ENSGACG00000007199	gpatch3	100	73.435	ENSORLG00015008692	gpatch3	100	73.435	Oryzias_latipes_hsok
ENSGACG00000007199	gpatch3	100	74.710	ENSOMEG00000010991	gpatch3	100	74.517	Oryzias_melastigma
ENSGACG00000007199	gpatch3	97	54.369	ENSOGAG00000011647	GPATCH3	96	54.369	Otolemur_garnettii
ENSGACG00000007199	gpatch3	97	54.599	ENSOARG00000003955	GPATCH3	93	53.816	Ovis_aries
ENSGACG00000007199	gpatch3	97	54.845	ENSPPAG00000032902	GPATCH3	95	55.039	Pan_paniscus
ENSGACG00000007199	gpatch3	98	55.750	ENSPPRG00000024244	GPATCH3	96	55.750	Panthera_pardus
ENSGACG00000007199	gpatch3	98	54.685	ENSPTIG00000014693	GPATCH3	96	54.685	Panthera_tigris_altaica
ENSGACG00000007199	gpatch3	97	54.651	ENSPTRG00000023419	GPATCH3	95	54.845	Pan_troglodytes
ENSGACG00000007199	gpatch3	97	53.488	ENSPANG00000007984	GPATCH3	95	54.808	Papio_anubis
ENSGACG00000007199	gpatch3	99	65.825	ENSPKIG00000020073	gpatch3	97	65.825	Paramormyrops_kingsleyae
ENSGACG00000007199	gpatch3	77	60.891	ENSPSIG00000017160	GPATCH3	95	61.481	Pelodiscus_sinensis
ENSGACG00000007199	gpatch3	100	71.346	ENSPMGG00000001703	gpatch3	100	72.115	Periophthalmus_magnuspinnatus
ENSGACG00000007199	gpatch3	97	55.340	ENSPEMG00000020632	Gpatch3	95	55.962	Peromyscus_maniculatus_bairdii
ENSGACG00000007199	gpatch3	97	54.280	ENSPCIG00000012681	GPATCH3	94	54.669	Phascolarctos_cinereus
ENSGACG00000007199	gpatch3	100	74.904	ENSPFOG00000009928	gpatch3	100	74.904	Poecilia_formosa
ENSGACG00000007199	gpatch3	100	75.096	ENSPLAG00000023784	gpatch3	100	75.096	Poecilia_latipinna
ENSGACG00000007199	gpatch3	100	74.713	ENSPMEG00000010268	gpatch3	100	74.904	Poecilia_mexicana
ENSGACG00000007199	gpatch3	98	73.622	ENSPREG00000008873	gpatch3	98	73.228	Poecilia_reticulata
ENSGACG00000007199	gpatch3	97	55.233	ENSPPYG00000001675	GPATCH3	95	55.426	Pongo_abelii
ENSGACG00000007199	gpatch3	97	54.457	ENSPCAG00000008286	GPATCH3	95	54.457	Procavia_capensis
ENSGACG00000007199	gpatch3	97	54.951	ENSPCOG00000020145	GPATCH3	95	54.951	Propithecus_coquereli
ENSGACG00000007199	gpatch3	97	52.242	ENSPVAG00000017282	GPATCH3	95	51.550	Pteropus_vampyrus
ENSGACG00000007199	gpatch3	98	77.953	ENSPNYG00000005172	gpatch3	100	77.756	Pundamilia_nyererei
ENSGACG00000007199	gpatch3	99	65.465	ENSPNAG00000018501	gpatch3	99	65.465	Pygocentrus_nattereri
ENSGACG00000007199	gpatch3	97	57.451	ENSRNOG00000007097	Gpatch3	95	56.275	Rattus_norvegicus
ENSGACG00000007199	gpatch3	97	54.651	ENSRBIG00000005853	GPATCH3	95	54.651	Rhinopithecus_bieti
ENSGACG00000007199	gpatch3	97	53.101	ENSRROG00000038382	GPATCH3	95	54.070	Rhinopithecus_roxellana
ENSGACG00000007199	gpatch3	97	53.950	ENSSBOG00000019680	GPATCH3	95	61.190	Saimiri_boliviensis_boliviensis
ENSGACG00000007199	gpatch3	97	54.440	ENSSHAG00000014268	GPATCH3	95	54.981	Sarcophilus_harrisii
ENSGACG00000007199	gpatch3	98	66.603	ENSSFOG00015009602	gpatch3	98	66.219	Scleropages_formosus
ENSGACG00000007199	gpatch3	100	78.053	ENSSMAG00000002067	gpatch3	100	79.350	Scophthalmus_maximus
ENSGACG00000007199	gpatch3	100	79.884	ENSSDUG00000017071	gpatch3	100	79.691	Seriola_dumerili
ENSGACG00000007199	gpatch3	100	79.884	ENSSLDG00000016549	gpatch3	100	79.691	Seriola_lalandi_dorsalis
ENSGACG00000007199	gpatch3	96	55.221	ENSSPUG00000018299	GPATCH3	94	55.020	Sphenodon_punctatus
ENSGACG00000007199	gpatch3	100	78.544	ENSSPAG00000013046	gpatch3	100	78.352	Stegastes_partitus
ENSGACG00000007199	gpatch3	97	56.725	ENSSSCG00000003564	GPATCH3	93	55.945	Sus_scrofa
ENSGACG00000007199	gpatch3	78	55.911	ENSTGUG00000000986	GPATCH3	98	57.426	Taeniopygia_guttata
ENSGACG00000007199	gpatch3	100	72.000	ENSTRUG00000013294	gpatch3	100	71.619	Takifugu_rubripes
ENSGACG00000007199	gpatch3	98	74.213	ENSTNIG00000009657	gpatch3	99	74.016	Tetraodon_nigroviridis
ENSGACG00000007199	gpatch3	74	67.890	ENSTBEG00000002042	GPATCH3	79	61.039	Tupaia_belangeri
ENSGACG00000007199	gpatch3	84	67.606	ENSTTRG00000016677	GPATCH3	85	67.606	Tursiops_truncatus
ENSGACG00000007199	gpatch3	97	55.078	ENSUAMG00000026235	GPATCH3	95	55.469	Ursus_americanus
ENSGACG00000007199	gpatch3	97	55.273	ENSUMAG00000011894	GPATCH3	95	55.664	Ursus_maritimus
ENSGACG00000007199	gpatch3	97	54.990	ENSVVUG00000012041	GPATCH3	95	55.664	Vulpes_vulpes
ENSGACG00000007199	gpatch3	96	49.405	ENSXETG00000030345	GPATCH3	99	49.405	Xenopus_tropicalis
ENSGACG00000007199	gpatch3	100	68.085	ENSXCOG00000016129	gpatch3	100	68.085	Xiphophorus_couchianus
ENSGACG00000007199	gpatch3	100	74.231	ENSXMAG00000010749	gpatch3	100	74.231	Xiphophorus_maculatus