EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000007387 (Gene tree)
Gene ID: -
Gene Symbol: rabl3
Alias: fb40b02|wu:fb40b02|zgc:100876
Full Name: RAB%2C member of RAS oncogene family-like 3
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3114 bases
Position: chrgroupXVI:14352135-14355248
Accession: ZDB-GENE-040808-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000009819	MMR_HSR1	PF01926.23	3.3e-06	1	1
ENSGACP00000009812	MMR_HSR1	PF01926.23	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000009832	-	1378	-	ENSGACP00000009812	233 (aa)	-	G3NWU3
ENSGACT00000009838	-	387	-	ENSGACP00000009819	129 (aa)	-	G3NWV0

Gene Model

Click here to download ENSGACG00000007387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000007387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000007387	rabl3	98	30.000	ENSGACG00000001725	zgc:101559	52	30.000
ENSGACG00000007387	rabl3	87	33.929	ENSGACG00000020437	-	51	33.929
ENSGACG00000007387	rabl3	87	34.821	ENSGACG00000001950	RAB39B	60	30.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000007387	rabl3	100	89.922	ENSG00000144840	RABL3	100	89.922	Homo_sapiens
ENSGACG00000007387	rabl3	100	95.349	ENSAPOG00000024479	rabl3	100	93.590	Acanthochromis_polyacanthus
ENSGACG00000007387	rabl3	100	91.473	ENSAMEG00000004809	RABL3	100	85.169	Ailuropoda_melanoleuca
ENSGACG00000007387	rabl3	100	93.798	ENSACIG00000014343	rabl3	100	88.841	Amphilophus_citrinellus
ENSGACG00000007387	rabl3	100	95.349	ENSAOCG00000011851	rabl3	100	93.590	Amphiprion_ocellaris
ENSGACG00000007387	rabl3	99	95.312	ENSAPEG00000011214	rabl3	100	93.590	Amphiprion_percula
ENSGACG00000007387	rabl3	100	96.124	ENSATEG00000003503	rabl3	100	93.991	Anabas_testudineus
ENSGACG00000007387	rabl3	100	83.721	ENSACAG00000011313	-	100	78.390	Anolis_carolinensis
ENSGACG00000007387	rabl3	100	92.248	ENSANAG00000027278	RABL3	100	86.441	Aotus_nancymaae
ENSGACG00000007387	rabl3	100	93.798	ENSACLG00000009820	rabl3	100	93.562	Astatotilapia_calliptera
ENSGACG00000007387	rabl3	100	93.798	ENSAMXG00000038716	rabl3	100	90.129	Astyanax_mexicanus
ENSGACG00000007387	rabl3	100	91.473	ENSBTAG00000015898	RABL3	100	86.017	Bos_taurus
ENSGACG00000007387	rabl3	100	92.248	ENSCJAG00000008611	RABL3	100	86.441	Callithrix_jacchus
ENSGACG00000007387	rabl3	100	91.473	ENSCAFG00000011292	RABL3	89	86.017	Canis_familiaris
ENSGACG00000007387	rabl3	100	91.473	ENSCAFG00020006397	RABL3	100	86.017	Canis_lupus_dingo
ENSGACG00000007387	rabl3	100	91.473	ENSCHIG00000017365	RABL3	100	86.017	Capra_hircus
ENSGACG00000007387	rabl3	100	90.698	ENSCPOG00000009645	RABL3	100	84.746	Cavia_porcellus
ENSGACG00000007387	rabl3	100	89.922	ENSCATG00000032561	RABL3	100	84.746	Cercocebus_atys
ENSGACG00000007387	rabl3	100	90.698	ENSCLAG00000010855	RABL3	100	84.322	Chinchilla_lanigera
ENSGACG00000007387	rabl3	98	89.683	ENSCSAG00000007155	RABL3	100	84.549	Chlorocebus_sabaeus
ENSGACG00000007387	rabl3	100	89.147	ENSCPBG00000001999	RABL3	100	84.746	Chrysemys_picta_bellii
ENSGACG00000007387	rabl3	100	89.922	ENSCANG00000031684	RABL3	100	84.746	Colobus_angolensis_palliatus
ENSGACG00000007387	rabl3	100	89.147	ENSCGRG00001021537	Rabl3	100	82.203	Cricetulus_griseus_chok1gshd
ENSGACG00000007387	rabl3	100	89.147	ENSCGRG00000002114	Rabl3	100	82.203	Cricetulus_griseus_crigri
ENSGACG00000007387	rabl3	100	92.248	ENSCSEG00000014982	rabl3	100	78.970	Cynoglossus_semilaevis
ENSGACG00000007387	rabl3	100	92.248	ENSCVAG00000009904	rabl3	100	76.824	Cyprinodon_variegatus
ENSGACG00000007387	rabl3	100	93.023	ENSDARG00000040959	rabl3	100	90.987	Danio_rerio
ENSGACG00000007387	rabl3	100	89.147	ENSDNOG00000008174	RABL3	100	83.898	Dasypus_novemcinctus
ENSGACG00000007387	rabl3	100	89.147	ENSETEG00000010206	RABL3	100	84.322	Echinops_telfairi
ENSGACG00000007387	rabl3	100	91.473	ENSECAG00000023059	RABL3	100	86.441	Equus_caballus
ENSGACG00000007387	rabl3	99	89.062	ENSEEUG00000002897	RABL3	100	80.085	Erinaceus_europaeus
ENSGACG00000007387	rabl3	100	94.574	ENSELUG00000014758	rabl3	100	91.416	Esox_lucius
ENSGACG00000007387	rabl3	100	91.473	ENSFCAG00000031879	RABL3	100	75.847	Felis_catus
ENSGACG00000007387	rabl3	100	86.822	ENSFALG00000005296	RABL3	100	82.627	Ficedula_albicollis
ENSGACG00000007387	rabl3	100	89.922	ENSFDAG00000000307	RABL3	100	85.106	Fukomys_damarensis
ENSGACG00000007387	rabl3	100	94.574	ENSFHEG00000011273	rabl3	100	90.987	Fundulus_heteroclitus
ENSGACG00000007387	rabl3	100	92.248	ENSGMOG00000007845	rabl3	100	91.416	Gadus_morhua
ENSGACG00000007387	rabl3	100	87.597	ENSGALG00000014949	RABL3	100	83.898	Gallus_gallus
ENSGACG00000007387	rabl3	100	90.698	ENSGAFG00000015953	rabl3	100	90.129	Gambusia_affinis
ENSGACG00000007387	rabl3	100	89.922	ENSGAGG00000003677	RABL3	100	85.169	Gopherus_agassizii
ENSGACG00000007387	rabl3	100	89.922	ENSGGOG00000006059	RABL3	100	84.322	Gorilla_gorilla
ENSGACG00000007387	rabl3	100	94.574	ENSHBUG00000019478	rabl3	93	93.991	Haplochromis_burtoni
ENSGACG00000007387	rabl3	100	90.698	ENSHGLG00000014491	RABL3	100	85.957	Heterocephalus_glaber_female
ENSGACG00000007387	rabl3	100	90.698	ENSHGLG00100004866	RABL3	100	85.957	Heterocephalus_glaber_male
ENSGACG00000007387	rabl3	100	96.899	ENSHCOG00000019245	rabl3	100	79.828	Hippocampus_comes
ENSGACG00000007387	rabl3	100	93.023	ENSIPUG00000012657	rabl3	100	89.270	Ictalurus_punctatus
ENSGACG00000007387	rabl3	100	90.698	ENSSTOG00000019452	RABL3	100	84.322	Ictidomys_tridecemlineatus
ENSGACG00000007387	rabl3	100	89.922	ENSJJAG00000023553	Rabl3	100	75.000	Jaculus_jaculus
ENSGACG00000007387	rabl3	100	89.147	ENSKMAG00000015464	rabl3	100	88.412	Kryptolebias_marmoratus
ENSGACG00000007387	rabl3	100	96.124	ENSLBEG00000020595	rabl3	100	94.872	Labrus_bergylta
ENSGACG00000007387	rabl3	100	96.124	ENSLBEG00000010627	-	100	94.872	Labrus_bergylta
ENSGACG00000007387	rabl3	100	89.147	ENSLOCG00000006265	rabl3	100	86.017	Lepisosteus_oculatus
ENSGACG00000007387	rabl3	100	91.473	ENSLAFG00000003711	RABL3	100	85.593	Loxodonta_africana
ENSGACG00000007387	rabl3	100	89.922	ENSMFAG00000031923	RABL3	100	84.746	Macaca_fascicularis
ENSGACG00000007387	rabl3	100	89.922	ENSMMUG00000001594	RABL3	100	75.000	Macaca_mulatta
ENSGACG00000007387	rabl3	100	89.922	ENSMNEG00000043980	RABL3	100	84.746	Macaca_nemestrina
ENSGACG00000007387	rabl3	100	89.922	ENSMLEG00000028177	RABL3	100	84.746	Mandrillus_leucophaeus
ENSGACG00000007387	rabl3	100	94.574	ENSMAMG00000015155	rabl3	100	93.562	Mastacembelus_armatus
ENSGACG00000007387	rabl3	100	93.798	ENSMZEG00005002607	rabl3	100	93.562	Maylandia_zebra
ENSGACG00000007387	rabl3	100	89.147	ENSMAUG00000013022	Rabl3	100	82.203	Mesocricetus_auratus
ENSGACG00000007387	rabl3	100	90.698	ENSMICG00000049288	RABL3	100	85.593	Microcebus_murinus
ENSGACG00000007387	rabl3	100	87.597	ENSMOCG00000015237	Rabl3	100	81.780	Microtus_ochrogaster
ENSGACG00000007387	rabl3	100	96.899	ENSMMOG00000005628	rabl3	100	89.787	Mola_mola
ENSGACG00000007387	rabl3	100	88.372	ENSMODG00000018232	RABL3	100	84.322	Monodelphis_domestica
ENSGACG00000007387	rabl3	100	93.023	ENSMALG00000018837	rabl3	100	86.864	Monopterus_albus
ENSGACG00000007387	rabl3	100	89.147	MGP_CAROLIEiJ_G0020728	Rabl3	100	89.147	Mus_caroli
ENSGACG00000007387	rabl3	100	89.147	ENSMUSG00000022827	Rabl3	100	89.147	Mus_musculus
ENSGACG00000007387	rabl3	100	89.147	MGP_PahariEiJ_G0016429	Rabl3	100	89.147	Mus_pahari
ENSGACG00000007387	rabl3	100	89.147	MGP_SPRETEiJ_G0021628	Rabl3	100	89.147	Mus_spretus
ENSGACG00000007387	rabl3	100	91.473	ENSMPUG00000008257	RABL3	89	86.017	Mustela_putorius_furo
ENSGACG00000007387	rabl3	100	89.922	ENSMLUG00000014113	RABL3	100	85.169	Myotis_lucifugus
ENSGACG00000007387	rabl3	100	89.922	ENSNGAG00000001939	Rabl3	99	75.217	Nannospalax_galili
ENSGACG00000007387	rabl3	100	95.349	ENSNBRG00000012423	rabl3	91	95.327	Neolamprologus_brichardi
ENSGACG00000007387	rabl3	100	89.922	ENSNLEG00000031723	RABL3	100	84.322	Nomascus_leucogenys
ENSGACG00000007387	rabl3	100	87.597	ENSMEUG00000006606	RABL3	100	83.051	Notamacropus_eugenii
ENSGACG00000007387	rabl3	100	90.698	ENSODEG00000004758	-	100	84.322	Octodon_degus
ENSGACG00000007387	rabl3	100	95.349	ENSONIG00000004281	rabl3	100	94.421	Oreochromis_niloticus
ENSGACG00000007387	rabl3	98	87.402	ENSOANG00000003928	RABL3	99	82.906	Ornithorhynchus_anatinus
ENSGACG00000007387	rabl3	100	93.023	ENSORLG00000020457	rabl3	100	92.704	Oryzias_latipes
ENSGACG00000007387	rabl3	100	93.023	ENSORLG00020008991	rabl3	100	87.554	Oryzias_latipes_hni
ENSGACG00000007387	rabl3	100	93.023	ENSORLG00015005649	rabl3	88	92.704	Oryzias_latipes_hsok
ENSGACG00000007387	rabl3	100	93.798	ENSOMEG00000015066	rabl3	100	93.562	Oryzias_melastigma
ENSGACG00000007387	rabl3	100	90.698	ENSOGAG00000005961	RABL3	100	84.746	Otolemur_garnettii
ENSGACG00000007387	rabl3	100	91.473	ENSOARG00000019939	RABL3	100	86.017	Ovis_aries
ENSGACG00000007387	rabl3	94	82.883	ENSPPAG00000036997	RABL3	87	82.883	Pan_paniscus
ENSGACG00000007387	rabl3	100	91.473	ENSPPRG00000016325	RABL3	100	86.017	Panthera_pardus
ENSGACG00000007387	rabl3	100	91.473	ENSPTIG00000018021	RABL3	100	86.017	Panthera_tigris_altaica
ENSGACG00000007387	rabl3	100	89.922	ENSPTRG00000015272	RABL3	100	84.322	Pan_troglodytes
ENSGACG00000007387	rabl3	100	89.922	ENSPANG00000001339	RABL3	100	84.746	Papio_anubis
ENSGACG00000007387	rabl3	100	92.248	ENSPKIG00000007818	rabl3	100	89.270	Paramormyrops_kingsleyae
ENSGACG00000007387	rabl3	100	89.147	ENSPSIG00000011358	RABL3	100	84.322	Pelodiscus_sinensis
ENSGACG00000007387	rabl3	100	93.798	ENSPMGG00000015794	rabl3	100	87.554	Periophthalmus_magnuspinnatus
ENSGACG00000007387	rabl3	100	88.372	ENSPEMG00000016913	Rabl3	100	82.203	Peromyscus_maniculatus_bairdii
ENSGACG00000007387	rabl3	100	87.597	ENSPCIG00000018922	RABL3	100	83.475	Phascolarctos_cinereus
ENSGACG00000007387	rabl3	100	93.023	ENSPFOG00000008586	rabl3	100	91.845	Poecilia_formosa
ENSGACG00000007387	rabl3	100	93.023	ENSPLAG00000014482	rabl3	100	91.845	Poecilia_latipinna
ENSGACG00000007387	rabl3	100	93.023	ENSPMEG00000002295	rabl3	100	91.845	Poecilia_mexicana
ENSGACG00000007387	rabl3	100	93.023	ENSPREG00000014815	rabl3	100	91.845	Poecilia_reticulata
ENSGACG00000007387	rabl3	100	89.922	ENSPPYG00000013501	RABL3	100	84.746	Pongo_abelii
ENSGACG00000007387	rabl3	100	91.473	ENSPCOG00000022230	RABL3	100	86.017	Propithecus_coquereli
ENSGACG00000007387	rabl3	100	89.147	ENSPVAG00000010013	RABL3	100	84.322	Pteropus_vampyrus
ENSGACG00000007387	rabl3	100	94.574	ENSPNYG00000006659	rabl3	100	93.991	Pundamilia_nyererei
ENSGACG00000007387	rabl3	100	94.574	ENSPNAG00000000748	rabl3	100	92.275	Pygocentrus_nattereri
ENSGACG00000007387	rabl3	100	89.147	ENSRNOG00000026085	Rabl3	100	81.780	Rattus_norvegicus
ENSGACG00000007387	rabl3	100	89.922	ENSRBIG00000040941	RABL3	100	84.746	Rhinopithecus_bieti
ENSGACG00000007387	rabl3	100	89.922	ENSRROG00000043745	RABL3	100	84.746	Rhinopithecus_roxellana
ENSGACG00000007387	rabl3	100	92.248	ENSSBOG00000004022	RABL3	100	86.441	Saimiri_boliviensis_boliviensis
ENSGACG00000007387	rabl3	100	87.597	ENSSHAG00000012233	RABL3	100	82.627	Sarcophilus_harrisii
ENSGACG00000007387	rabl3	100	93.023	ENSSFOG00015010171	rabl3	100	90.129	Scleropages_formosus
ENSGACG00000007387	rabl3	100	95.349	ENSSMAG00000002403	rabl3	100	93.590	Scophthalmus_maximus
ENSGACG00000007387	rabl3	100	96.899	ENSSDUG00000012078	rabl3	100	95.279	Seriola_dumerili
ENSGACG00000007387	rabl3	100	96.124	ENSSLDG00000021899	rabl3	100	94.850	Seriola_lalandi_dorsalis
ENSGACG00000007387	rabl3	100	91.473	ENSSARG00000008316	RABL3	100	85.593	Sorex_araneus
ENSGACG00000007387	rabl3	100	88.372	ENSSPUG00000017490	RABL3	100	84.322	Sphenodon_punctatus
ENSGACG00000007387	rabl3	100	94.574	ENSSPAG00000011642	rabl3	100	93.991	Stegastes_partitus
ENSGACG00000007387	rabl3	100	91.473	ENSSSCG00000035258	RABL3	100	86.441	Sus_scrofa
ENSGACG00000007387	rabl3	100	86.822	ENSTGUG00000013374	RABL3	100	83.051	Taeniopygia_guttata
ENSGACG00000007387	rabl3	100	94.574	ENSTRUG00000007846	RABL3	100	95.312	Takifugu_rubripes
ENSGACG00000007387	rabl3	100	90.698	ENSTBEG00000005153	RABL3	100	72.034	Tupaia_belangeri
ENSGACG00000007387	rabl3	100	91.473	ENSUAMG00000005299	RABL3	100	85.169	Ursus_americanus
ENSGACG00000007387	rabl3	100	90.698	ENSUMAG00000025256	RABL3	89	84.746	Ursus_maritimus
ENSGACG00000007387	rabl3	100	91.473	ENSVPAG00000003776	RABL3	100	86.441	Vicugna_pacos
ENSGACG00000007387	rabl3	100	91.473	ENSVVUG00000022300	RABL3	89	86.017	Vulpes_vulpes
ENSGACG00000007387	rabl3	100	91.473	ENSXMAG00000003244	rabl3	100	90.558	Xiphophorus_maculatus