EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000007430 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 2527 bases
Position: chrgroupXVII:6282073-6284599
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000009854	FAM83	PF07894.12	5.2e-37	1	1
ENSGACP00000009856	FAM83	PF07894.12	1.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000009877	-	629	-	ENSGACP00000009856	107 (aa)	-	G3NWY7
ENSGACT00000009875	-	581	-	ENSGACP00000009854	137 (aa)	-	G3NWY5

Gene Model

Click here to download ENSGACG00000007430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000007430's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000007430	-	96	37.500	ENSGACG00000010183	fam83d	54	37.500
ENSGACG00000007430	-	93	38.519	ENSGACG00000014529	fam83fa	52	38.519

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000007430	-	99	66.912	ENSGMOG00000001849	-	100	66.912	Gadus_morhua
ENSGACG00000007430	-	93	37.778	ENSGMOG00000009556	fam83fa	54	37.778	Gadus_morhua
ENSGACG00000007430	-	100	55.140	ENSGAFG00000012334	-	55	55.140	Gambusia_affinis
ENSGACG00000007430	-	96	52.672	ENSLOCG00000001350	-	53	52.672	Lepisosteus_oculatus
ENSGACG00000007430	-	100	59.813	ENSONIG00000003917	-	55	72.321	Oreochromis_niloticus
ENSGACG00000007430	-	99	65.972	ENSTNIG00000014784	-	56	65.972	Tetraodon_nigroviridis
ENSGACG00000007430	-	50	41.333	ENSTNIG00000002213	-	56	41.333	Tetraodon_nigroviridis