EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000007528 (Gene tree)
Gene ID: -
Gene Symbol: rasef
Alias: si:ch73-275j21.1
Full Name: RAS and EF-hand domain containing
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 10836 bases
Position: chrgroupXIII:7168271-7179106
Accession: ZDB-GENE-081105-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000009985	MMR_HSR1	PF01926.23	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000010007	-	2079	-	ENSGACP00000009985	692 (aa)	-	G3NXB6

Gene Model

Click here to download ENSGACG00000007528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000007528's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000007528	rasef	99	37.236	ENSGACG00000010798	zgc:162879	99	37.236

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000007528	rasef	99	52.949	ENSG00000165105	RASEF	99	53.217	Homo_sapiens
ENSGACG00000007528	rasef	89	78.816	ENSAPOG00000024369	rasef	100	79.128	Acanthochromis_polyacanthus
ENSGACG00000007528	rasef	98	53.615	ENSAMEG00000009467	RASEF	98	53.752	Ailuropoda_melanoleuca
ENSGACG00000007528	rasef	96	72.889	ENSACIG00000005549	rasef	99	72.889	Amphilophus_citrinellus
ENSGACG00000007528	rasef	94	76.677	ENSAOCG00000011464	rasef	93	76.677	Amphiprion_ocellaris
ENSGACG00000007528	rasef	100	77.994	ENSAPEG00000003461	rasef	100	78.134	Amphiprion_percula
ENSGACG00000007528	rasef	95	77.827	ENSATEG00000015032	rasef	100	78.120	Anabas_testudineus
ENSGACG00000007528	rasef	85	54.530	ENSAPLG00000013969	RASEF	95	54.530	Anas_platyrhynchos
ENSGACG00000007528	rasef	100	54.621	ENSACAG00000002155	RASEF	99	54.621	Anolis_carolinensis
ENSGACG00000007528	rasef	99	52.547	ENSANAG00000035226	RASEF	99	53.217	Aotus_nancymaae
ENSGACG00000007528	rasef	100	79.441	ENSACLG00000017818	rasef	100	79.441	Astatotilapia_calliptera
ENSGACG00000007528	rasef	99	55.082	ENSAMXG00000011411	rasef	98	55.495	Astyanax_mexicanus
ENSGACG00000007528	rasef	99	53.423	ENSBTAG00000021751	RASEF	99	53.423	Bos_taurus
ENSGACG00000007528	rasef	99	52.695	ENSCJAG00000003547	RASEF	99	53.369	Callithrix_jacchus
ENSGACG00000007528	rasef	96	56.250	ENSCAFG00000001453	RASEF	91	51.989	Canis_familiaris
ENSGACG00000007528	rasef	96	56.410	ENSCAFG00020023859	RASEF	99	52.823	Canis_lupus_dingo
ENSGACG00000007528	rasef	99	53.163	ENSCHIG00000020336	RASEF	96	56.628	Capra_hircus
ENSGACG00000007528	rasef	74	54.887	ENSTSYG00000006987	RASEF	99	54.887	Carlito_syrichta
ENSGACG00000007528	rasef	71	47.782	ENSCAPG00000010585	-	99	47.782	Cavia_aperea
ENSGACG00000007528	rasef	85	53.577	ENSCPOG00000005004	RASEF	99	53.577	Cavia_porcellus
ENSGACG00000007528	rasef	99	53.154	ENSCCAG00000031624	RASEF	99	53.423	Cebus_capucinus
ENSGACG00000007528	rasef	70	40.574	ENSCLAG00000004622	-	88	40.574	Chinchilla_lanigera
ENSGACG00000007528	rasef	99	52.981	ENSCSAG00000007663	RASEF	98	52.981	Chlorocebus_sabaeus
ENSGACG00000007528	rasef	84	55.184	ENSCHOG00000001831	RASEF	98	55.184	Choloepus_hoffmanni
ENSGACG00000007528	rasef	99	54.930	ENSCPBG00000019037	RASEF	99	54.930	Chrysemys_picta_bellii
ENSGACG00000007528	rasef	99	52.227	ENSCANG00000034081	RASEF	98	52.901	Colobus_angolensis_palliatus
ENSGACG00000007528	rasef	84	55.333	ENSCGRG00001001324	Rasef	99	55.333	Cricetulus_griseus_chok1gshd
ENSGACG00000007528	rasef	79	55.044	ENSCGRG00000006455	Rasef	99	55.044	Cricetulus_griseus_crigri
ENSGACG00000007528	rasef	91	67.857	ENSCSEG00000017898	rasef	92	67.913	Cynoglossus_semilaevis
ENSGACG00000007528	rasef	100	76.653	ENSCVAG00000006168	rasef	94	76.653	Cyprinodon_variegatus
ENSGACG00000007528	rasef	99	57.361	ENSDARG00000076250	rasef	99	57.361	Danio_rerio
ENSGACG00000007528	rasef	99	53.289	ENSDNOG00000006002	RASEF	90	53.289	Dasypus_novemcinctus
ENSGACG00000007528	rasef	78	54.054	ENSDORG00000015570	Rasef	99	53.971	Dipodomys_ordii
ENSGACG00000007528	rasef	83	36.143	ENSEBUG00000012179	rasef	99	36.143	Eptatretus_burgeri
ENSGACG00000007528	rasef	94	43.123	ENSEBUG00000012629	rasef	97	43.343	Eptatretus_burgeri
ENSGACG00000007528	rasef	99	55.259	ENSEASG00005015967	RASEF	99	55.259	Equus_asinus_asinus
ENSGACG00000007528	rasef	99	54.735	ENSECAG00000000324	RASEF	98	56.066	Equus_caballus
ENSGACG00000007528	rasef	80	52.105	ENSEEUG00000008455	RASEF	99	52.105	Erinaceus_europaeus
ENSGACG00000007528	rasef	99	53.297	ENSFCAG00000002416	RASEF	99	54.105	Felis_catus
ENSGACG00000007528	rasef	85	55.281	ENSFALG00000003611	RASEF	99	55.281	Ficedula_albicollis
ENSGACG00000007528	rasef	85	55.241	ENSFDAG00000013428	RASEF	99	55.241	Fukomys_damarensis
ENSGACG00000007528	rasef	96	72.673	ENSFHEG00000022470	rasef	92	72.673	Fundulus_heteroclitus
ENSGACG00000007528	rasef	84	84.971	ENSGMOG00000010090	rasef	100	63.982	Gadus_morhua
ENSGACG00000007528	rasef	99	53.527	ENSGALG00000012576	RASEF	99	54.420	Gallus_gallus
ENSGACG00000007528	rasef	100	76.346	ENSGAFG00000013735	rasef	97	76.346	Gambusia_affinis
ENSGACG00000007528	rasef	99	54.866	ENSGAGG00000007338	RASEF	99	55.148	Gopherus_agassizii
ENSGACG00000007528	rasef	99	52.815	ENSGGOG00000006651	RASEF	99	53.083	Gorilla_gorilla
ENSGACG00000007528	rasef	100	79.441	ENSHBUG00000010345	rasef	99	79.441	Haplochromis_burtoni
ENSGACG00000007528	rasef	99	52.420	ENSHGLG00000000399	RASEF	98	52.420	Heterocephalus_glaber_female
ENSGACG00000007528	rasef	85	54.409	ENSHGLG00100008043	RASEF	99	54.409	Heterocephalus_glaber_male
ENSGACG00000007528	rasef	92	87.310	ENSHCOG00000010976	rasef	99	65.149	Hippocampus_comes
ENSGACG00000007528	rasef	96	54.467	ENSIPUG00000008768	rasef	93	54.467	Ictalurus_punctatus
ENSGACG00000007528	rasef	99	52.830	ENSSTOG00000004311	RASEF	99	53.235	Ictidomys_tridecemlineatus
ENSGACG00000007528	rasef	85	56.146	ENSJJAG00000023215	Rasef	99	56.146	Jaculus_jaculus
ENSGACG00000007528	rasef	100	75.137	ENSKMAG00000021106	rasef	88	75.549	Kryptolebias_marmoratus
ENSGACG00000007528	rasef	95	73.851	ENSLBEG00000021098	-	99	68.986	Labrus_bergylta
ENSGACG00000007528	rasef	99	55.742	ENSLACG00000010849	RASEF	99	55.742	Latimeria_chalumnae
ENSGACG00000007528	rasef	99	60.284	ENSLOCG00000002094	rasef	98	60.284	Lepisosteus_oculatus
ENSGACG00000007528	rasef	85	55.887	ENSLAFG00000010552	RASEF	99	55.887	Loxodonta_africana
ENSGACG00000007528	rasef	99	52.497	ENSMFAG00000046414	RASEF	98	52.767	Macaca_fascicularis
ENSGACG00000007528	rasef	99	52.285	ENSMNEG00000044341	RASEF	98	52.554	Macaca_nemestrina
ENSGACG00000007528	rasef	99	52.497	ENSMLEG00000034579	RASEF	98	52.767	Mandrillus_leucophaeus
ENSGACG00000007528	rasef	86	77.958	ENSMAMG00000001536	rasef	96	78.120	Mastacembelus_armatus
ENSGACG00000007528	rasef	96	70.299	ENSMZEG00005004819	rasef	99	70.299	Maylandia_zebra
ENSGACG00000007528	rasef	85	56.551	ENSMAUG00000010820	Rasef	99	56.551	Mesocricetus_auratus
ENSGACG00000007528	rasef	98	52.120	ENSMICG00000011836	RASEF	99	53.629	Microcebus_murinus
ENSGACG00000007528	rasef	86	56.230	ENSMOCG00000000943	Rasef	99	56.184	Microtus_ochrogaster
ENSGACG00000007528	rasef	95	69.094	ENSMMOG00000000102	rasef	97	69.391	Mola_mola
ENSGACG00000007528	rasef	99	52.981	ENSMODG00000009037	RASEF	99	52.981	Monodelphis_domestica
ENSGACG00000007528	rasef	100	72.663	ENSMALG00000009830	rasef	100	72.663	Monopterus_albus
ENSGACG00000007528	rasef	86	55.122	MGP_CAROLIEiJ_G0026109	Rasef	99	55.477	Mus_caroli
ENSGACG00000007528	rasef	99	54.494	ENSMUSG00000043003	Rasef	99	55.556	Mus_musculus
ENSGACG00000007528	rasef	85	55.629	MGP_PahariEiJ_G0028447	Rasef	99	55.654	Mus_pahari
ENSGACG00000007528	rasef	86	55.032	MGP_SPRETEiJ_G0027075	Rasef	99	55.379	Mus_spretus
ENSGACG00000007528	rasef	79	54.417	ENSMPUG00000013070	RASEF	99	54.417	Mustela_putorius_furo
ENSGACG00000007528	rasef	98	53.488	ENSMLUG00000013108	RASEF	99	53.083	Myotis_lucifugus
ENSGACG00000007528	rasef	79	56.206	ENSNGAG00000014878	Rasef	99	56.206	Nannospalax_galili
ENSGACG00000007528	rasef	99	52.279	ENSNLEG00000003245	RASEF	99	52.547	Nomascus_leucogenys
ENSGACG00000007528	rasef	99	50.606	ENSMEUG00000016412	RASEF	99	51.144	Notamacropus_eugenii
ENSGACG00000007528	rasef	85	50.877	ENSOPRG00000002742	-	80	50.877	Ochotona_princeps
ENSGACG00000007528	rasef	100	80.252	ENSONIG00000015021	rasef	99	76.571	Oreochromis_niloticus
ENSGACG00000007528	rasef	99	50.596	ENSOANG00000010379	RASEF	99	50.861	Ornithorhynchus_anatinus
ENSGACG00000007528	rasef	99	51.007	ENSOCUG00000001548	RASEF	99	51.812	Oryctolagus_cuniculus
ENSGACG00000007528	rasef	100	75.843	ENSORLG00000005076	rasef	96	76.124	Oryzias_latipes
ENSGACG00000007528	rasef	100	75.983	ENSORLG00020020049	rasef	96	76.264	Oryzias_latipes_hni
ENSGACG00000007528	rasef	100	75.562	ENSORLG00015008479	rasef	96	75.843	Oryzias_latipes_hsok
ENSGACG00000007528	rasef	100	76.826	ENSOMEG00000023457	rasef	99	78.203	Oryzias_melastigma
ENSGACG00000007528	rasef	85	56.198	ENSOGAG00000012724	RASEF	99	56.198	Otolemur_garnettii
ENSGACG00000007528	rasef	99	52.894	ENSOARG00000009073	RASEF	93	53.495	Ovis_aries
ENSGACG00000007528	rasef	99	54.017	ENSPPAG00000042152	RASEF	99	54.571	Pan_paniscus
ENSGACG00000007528	rasef	99	52.624	ENSPPRG00000008487	RASEF	99	53.567	Panthera_pardus
ENSGACG00000007528	rasef	88	57.029	ENSPTIG00000006676	RASEF	96	55.472	Panthera_tigris_altaica
ENSGACG00000007528	rasef	99	54.017	ENSPTRG00000021052	RASEF	99	54.571	Pan_troglodytes
ENSGACG00000007528	rasef	99	52.767	ENSPANG00000024899	RASEF	98	52.767	Papio_anubis
ENSGACG00000007528	rasef	86	54.502	ENSPSIG00000017699	RASEF	96	55.844	Pelodiscus_sinensis
ENSGACG00000007528	rasef	100	58.333	ENSPMGG00000015499	rasef	86	91.176	Periophthalmus_magnuspinnatus
ENSGACG00000007528	rasef	85	56.291	ENSPEMG00000002797	Rasef	99	56.291	Peromyscus_maniculatus_bairdii
ENSGACG00000007528	rasef	94	39.148	ENSPMAG00000001634	rasef	99	39.566	Petromyzon_marinus
ENSGACG00000007528	rasef	99	53.297	ENSPCIG00000027655	RASEF	99	53.297	Phascolarctos_cinereus
ENSGACG00000007528	rasef	99	71.332	ENSPFOG00000018924	rasef	99	71.332	Poecilia_formosa
ENSGACG00000007528	rasef	84	68.814	ENSPLAG00000022907	RASEF	96	68.814	Poecilia_latipinna
ENSGACG00000007528	rasef	100	76.562	ENSPMEG00000006546	rasef	100	76.562	Poecilia_mexicana
ENSGACG00000007528	rasef	100	76.062	ENSPREG00000018728	rasef	95	76.062	Poecilia_reticulata
ENSGACG00000007528	rasef	99	52.815	ENSPPYG00000019320	RASEF	99	52.949	Pongo_abelii
ENSGACG00000007528	rasef	99	53.083	ENSPCOG00000022979	RASEF	99	53.970	Propithecus_coquereli
ENSGACG00000007528	rasef	99	52.419	ENSPVAG00000003682	RASEF	99	53.226	Pteropus_vampyrus
ENSGACG00000007528	rasef	95	75.000	ENSPNYG00000010579	rasef	94	75.000	Pundamilia_nyererei
ENSGACG00000007528	rasef	96	57.205	ENSPNAG00000016447	rasef	95	57.205	Pygocentrus_nattereri
ENSGACG00000007528	rasef	99	53.652	ENSRNOG00000024190	Rasef	99	53.652	Rattus_norvegicus
ENSGACG00000007528	rasef	99	52.703	ENSRBIG00000039516	RASEF	98	52.973	Rhinopithecus_bieti
ENSGACG00000007528	rasef	94	53.475	ENSRROG00000044397	RASEF	98	53.759	Rhinopithecus_roxellana
ENSGACG00000007528	rasef	99	51.887	ENSSBOG00000029298	RASEF	99	51.887	Saimiri_boliviensis_boliviensis
ENSGACG00000007528	rasef	100	57.975	ENSSFOG00015009014	rasef	99	57.975	Scleropages_formosus
ENSGACG00000007528	rasef	99	76.870	ENSSMAG00000000942	rasef	99	76.870	Scophthalmus_maximus
ENSGACG00000007528	rasef	82	73.285	ENSSDUG00000022228	rasef	93	60.420	Seriola_dumerili
ENSGACG00000007528	rasef	100	76.718	ENSSLDG00000001784	rasef	94	76.858	Seriola_lalandi_dorsalis
ENSGACG00000007528	rasef	99	52.833	ENSSPUG00000002899	RASEF	99	52.833	Sphenodon_punctatus
ENSGACG00000007528	rasef	100	78.404	ENSSPAG00000002442	rasef	98	78.404	Stegastes_partitus
ENSGACG00000007528	rasef	88	56.891	ENSSSCG00000040707	-	92	56.891	Sus_scrofa
ENSGACG00000007528	rasef	99	53.665	ENSTGUG00000003216	RASEF	99	53.665	Taeniopygia_guttata
ENSGACG00000007528	rasef	99	75.490	ENSTRUG00000011541	rasef	99	75.490	Takifugu_rubripes
ENSGACG00000007528	rasef	99	70.204	ENSTNIG00000006010	rasef	99	70.204	Tetraodon_nigroviridis
ENSGACG00000007528	rasef	99	47.574	ENSTTRG00000002061	RASEF	99	48.248	Tursiops_truncatus
ENSGACG00000007528	rasef	99	54.558	ENSUAMG00000021591	RASEF	99	54.972	Ursus_americanus
ENSGACG00000007528	rasef	85	56.322	ENSUMAG00000004670	RASEF	94	56.322	Ursus_maritimus
ENSGACG00000007528	rasef	89	55.031	ENSVVUG00000029736	RASEF	99	54.461	Vulpes_vulpes
ENSGACG00000007528	rasef	99	51.984	ENSXETG00000016758	mgc147600	99	51.984	Xenopus_tropicalis
ENSGACG00000007528	rasef	80	62.411	ENSXCOG00000005178	rasef	84	62.411	Xiphophorus_couchianus
ENSGACG00000007528	rasef	100	76.204	ENSXMAG00000015129	rasef	100	76.204	Xiphophorus_maculatus