EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000007620 (Gene tree)
Gene ID: -
Gene Symbol: zgc:123010
Alias: fk11h08|wu:fk11h08
Full Name: zgc:123010
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3462 bases
Position: chrgroupVI:8854592-8858053
Accession: ZDB-GENE-051120-15
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000010116	RRM_1	PF00076.22	3.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000010138	-	1161	-	ENSGACP00000010116	373 (aa)	-	G3NXP6
ENSGACT00000010133	-	870	-	ENSGACP00000010111	290 (aa)	-	G3NXP1

Gene Model

Click here to download ENSGACG00000007620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000007620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000007620	zgc:123010	87	34.568	ENSGACG00000004936	-	97	34.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000007620	zgc:123010	89	31.378	ENSAPOG00000005058	si:dkey-33c12.4	57	31.633	Acanthochromis_polyacanthus
ENSGACG00000007620	zgc:123010	81	60.912	ENSAPOG00000001034	-	73	60.912	Acanthochromis_polyacanthus
ENSGACG00000007620	zgc:123010	100	89.008	ENSAPOG00000019633	zgc:123010	72	89.008	Acanthochromis_polyacanthus
ENSGACG00000007620	zgc:123010	95	81.972	ENSACIG00000021684	zgc:123010	89	81.972	Amphilophus_citrinellus
ENSGACG00000007620	zgc:123010	87	32.546	ENSAOCG00000020066	si:dkey-33c12.4	54	32.283	Amphiprion_ocellaris
ENSGACG00000007620	zgc:123010	100	87.936	ENSAOCG00000005910	zgc:123010	72	87.936	Amphiprion_ocellaris
ENSGACG00000007620	zgc:123010	100	88.204	ENSAPEG00000014305	zgc:123010	76	88.204	Amphiprion_percula
ENSGACG00000007620	zgc:123010	100	84.987	ENSATEG00000001220	zgc:123010	72	84.987	Anabas_testudineus
ENSGACG00000007620	zgc:123010	95	56.438	ENSATEG00000022160	-	71	56.438	Anabas_testudineus
ENSGACG00000007620	zgc:123010	90	31.959	ENSATEG00000018885	si:dkey-33c12.4	58	31.959	Anabas_testudineus
ENSGACG00000007620	zgc:123010	57	43.981	ENSAPLG00000013566	-	100	43.981	Anas_platyrhynchos
ENSGACG00000007620	zgc:123010	98	86.413	ENSACLG00000010188	zgc:123010	72	86.413	Astatotilapia_calliptera
ENSGACG00000007620	zgc:123010	96	56.250	ENSACLG00000012346	-	72	56.250	Astatotilapia_calliptera
ENSGACG00000007620	zgc:123010	72	37.313	ENSACLG00000003019	-	56	38.308	Astatotilapia_calliptera
ENSGACG00000007620	zgc:123010	95	32.850	ENSAMXG00000010871	si:dkey-33c12.4	65	33.575	Astyanax_mexicanus
ENSGACG00000007620	zgc:123010	99	74.799	ENSAMXG00000041967	zgc:123010	69	74.799	Astyanax_mexicanus
ENSGACG00000007620	zgc:123010	81	32.486	ENSCPBG00000024454	-	62	31.797	Chrysemys_picta_bellii
ENSGACG00000007620	zgc:123010	100	84.718	ENSCVAG00000013288	zgc:123010	72	84.718	Cyprinodon_variegatus
ENSGACG00000007620	zgc:123010	86	32.011	ENSCVAG00000006564	-	56	31.830	Cyprinodon_variegatus
ENSGACG00000007620	zgc:123010	72	32.081	ENSCVAG00000004187	-	57	32.081	Cyprinodon_variegatus
ENSGACG00000007620	zgc:123010	99	70.161	ENSDARG00000039082	zgc:123010	75	70.161	Danio_rerio
ENSGACG00000007620	zgc:123010	96	33.726	ENSDARG00000057890	si:dkey-33c12.4	65	33.649	Danio_rerio
ENSGACG00000007620	zgc:123010	77	37.963	ENSEBUG00000001368	-	55	37.695	Eptatretus_burgeri
ENSGACG00000007620	zgc:123010	93	31.442	ENSELUG00000001633	-	64	31.442	Esox_lucius
ENSGACG00000007620	zgc:123010	98	76.087	ENSELUG00000022008	zgc:123010	86	73.464	Esox_lucius
ENSGACG00000007620	zgc:123010	100	60.743	ENSELUG00000021447	-	75	60.743	Esox_lucius
ENSGACG00000007620	zgc:123010	82	31.429	ENSELUG00000002009	si:dkey-33c12.4	88	33.542	Esox_lucius
ENSGACG00000007620	zgc:123010	62	36.154	ENSFALG00000008867	-	99	36.154	Ficedula_albicollis
ENSGACG00000007620	zgc:123010	89	31.888	ENSFHEG00000005521	si:dkey-33c12.4	59	31.888	Fundulus_heteroclitus
ENSGACG00000007620	zgc:123010	100	84.450	ENSFHEG00000002306	zgc:123010	72	84.450	Fundulus_heteroclitus
ENSGACG00000007620	zgc:123010	100	77.005	ENSGMOG00000018473	zgc:123010	100	77.005	Gadus_morhua
ENSGACG00000007620	zgc:123010	73	34.098	ENSGALG00000036747	TTC31	58	34.098	Gallus_gallus
ENSGACG00000007620	zgc:123010	100	82.842	ENSGAFG00000009373	zgc:123010	72	82.842	Gambusia_affinis
ENSGACG00000007620	zgc:123010	100	54.948	ENSHBUG00000016720	-	72	56.216	Haplochromis_burtoni
ENSGACG00000007620	zgc:123010	94	33.580	ENSIPUG00000005998	si:dkey-33c12.4	64	33.578	Ictalurus_punctatus
ENSGACG00000007620	zgc:123010	100	86.059	ENSKMAG00000021350	zgc:123010	73	86.059	Kryptolebias_marmoratus
ENSGACG00000007620	zgc:123010	65	41.477	ENSKMAG00000006468	-	62	30.263	Kryptolebias_marmoratus
ENSGACG00000007620	zgc:123010	100	87.131	ENSLBEG00000023984	zgc:123010	72	87.131	Labrus_bergylta
ENSGACG00000007620	zgc:123010	81	31.680	ENSLBEG00000021088	-	64	30.476	Labrus_bergylta
ENSGACG00000007620	zgc:123010	100	58.730	ENSLBEG00000013518	-	74	58.730	Labrus_bergylta
ENSGACG00000007620	zgc:123010	95	58.172	ENSLACG00000009001	zgc:123010	79	58.172	Latimeria_chalumnae
ENSGACG00000007620	zgc:123010	79	35.103	ENSLACG00000004602	-	72	32.446	Latimeria_chalumnae
ENSGACG00000007620	zgc:123010	94	34.689	ENSLOCG00000001861	-	63	35.646	Lepisosteus_oculatus
ENSGACG00000007620	zgc:123010	100	64.721	ENSLOCG00000008967	zgc:123010	74	64.987	Lepisosteus_oculatus
ENSGACG00000007620	zgc:123010	88	55.457	ENSMAMG00000003394	-	91	55.457	Mastacembelus_armatus
ENSGACG00000007620	zgc:123010	88	56.886	ENSMAMG00000003439	-	97	54.696	Mastacembelus_armatus
ENSGACG00000007620	zgc:123010	99	77.089	ENSMAMG00000001145	zgc:123010	89	77.089	Mastacembelus_armatus
ENSGACG00000007620	zgc:123010	95	59.053	ENSMAMG00000002460	-	86	59.331	Mastacembelus_armatus
ENSGACG00000007620	zgc:123010	95	59.053	ENSMAMG00000002377	-	82	59.053	Mastacembelus_armatus
ENSGACG00000007620	zgc:123010	86	32.021	ENSMAMG00000000111	si:dkey-33c12.4	57	32.021	Mastacembelus_armatus
ENSGACG00000007620	zgc:123010	98	86.413	ENSMZEG00005027733	zgc:123010	72	86.413	Maylandia_zebra
ENSGACG00000007620	zgc:123010	96	55.978	ENSMZEG00005014740	-	91	55.978	Maylandia_zebra
ENSGACG00000007620	zgc:123010	94	51.657	ENSMMOG00000017955	-	86	51.657	Mola_mola
ENSGACG00000007620	zgc:123010	100	77.748	ENSMMOG00000010544	zgc:123010	78	77.748	Mola_mola
ENSGACG00000007620	zgc:123010	69	30.816	ENSMALG00000003167	-	50	30.816	Monopterus_albus
ENSGACG00000007620	zgc:123010	82	31.492	ENSMALG00000002265	si:dkey-33c12.4	60	31.282	Monopterus_albus
ENSGACG00000007620	zgc:123010	100	85.791	ENSMALG00000017698	zgc:123010	72	85.791	Monopterus_albus
ENSGACG00000007620	zgc:123010	98	77.596	ENSNBRG00000021157	zgc:123010	83	77.596	Neolamprologus_brichardi
ENSGACG00000007620	zgc:123010	70	38.500	ENSONIG00000007538	-	98	37.354	Oreochromis_niloticus
ENSGACG00000007620	zgc:123010	79	56.954	ENSONIG00000000297	-	100	56.954	Oreochromis_niloticus
ENSGACG00000007620	zgc:123010	81	35.314	ENSONIG00000012263	-	99	34.769	Oreochromis_niloticus
ENSGACG00000007620	zgc:123010	100	82.400	ENSONIG00000018353	zgc:123010	76	82.400	Oreochromis_niloticus
ENSGACG00000007620	zgc:123010	88	81.155	ENSORLG00000007675	zgc:123010	70	81.155	Oryzias_latipes
ENSGACG00000007620	zgc:123010	76	31.933	ENSORLG00000030385	-	58	31.933	Oryzias_latipes
ENSGACG00000007620	zgc:123010	88	80.851	ENSORLG00020003457	zgc:123010	70	80.851	Oryzias_latipes_hni
ENSGACG00000007620	zgc:123010	76	31.844	ENSORLG00015008400	-	58	31.844	Oryzias_latipes_hsok
ENSGACG00000007620	zgc:123010	100	82.038	ENSORLG00015008373	zgc:123010	73	82.038	Oryzias_latipes_hsok
ENSGACG00000007620	zgc:123010	76	38.235	ENSOMEG00000009428	-	58	32.787	Oryzias_melastigma
ENSGACG00000007620	zgc:123010	100	84.450	ENSOMEG00000003408	zgc:123010	73	84.450	Oryzias_melastigma
ENSGACG00000007620	zgc:123010	93	32.170	ENSPKIG00000011819	-	61	33.167	Paramormyrops_kingsleyae
ENSGACG00000007620	zgc:123010	100	61.008	ENSPKIG00000015521	zgc:123010	83	61.008	Paramormyrops_kingsleyae
ENSGACG00000007620	zgc:123010	99	67.112	ENSPMGG00000020251	zgc:123010	83	67.112	Periophthalmus_magnuspinnatus
ENSGACG00000007620	zgc:123010	78	44.178	ENSPMAG00000004544	zgc:123010	100	44.178	Petromyzon_marinus
ENSGACG00000007620	zgc:123010	65	40.984	ENSPMAG00000009352	-	79	41.949	Petromyzon_marinus
ENSGACG00000007620	zgc:123010	65	33.784	ENSPFOG00000017092	-	73	31.728	Poecilia_formosa
ENSGACG00000007620	zgc:123010	87	30.829	ENSPFOG00000009143	si:dkey-33c12.4	56	30.829	Poecilia_formosa
ENSGACG00000007620	zgc:123010	100	82.842	ENSPFOG00000001073	zgc:123010	72	82.842	Poecilia_formosa
ENSGACG00000007620	zgc:123010	87	30.829	ENSPLAG00000022537	si:dkey-33c12.4	58	31.347	Poecilia_latipinna
ENSGACG00000007620	zgc:123010	100	82.842	ENSPLAG00000007711	zgc:123010	72	82.842	Poecilia_latipinna
ENSGACG00000007620	zgc:123010	100	82.842	ENSPMEG00000005092	zgc:123010	72	82.842	Poecilia_mexicana
ENSGACG00000007620	zgc:123010	87	30.311	ENSPMEG00000015590	si:dkey-33c12.4	56	30.829	Poecilia_mexicana
ENSGACG00000007620	zgc:123010	95	72.394	ENSPREG00000019587	zgc:123010	79	72.394	Poecilia_reticulata
ENSGACG00000007620	zgc:123010	95	52.520	ENSPNYG00000023304	-	87	52.520	Pundamilia_nyererei
ENSGACG00000007620	zgc:123010	98	86.649	ENSPNYG00000007893	zgc:123010	72	86.649	Pundamilia_nyererei
ENSGACG00000007620	zgc:123010	93	32.195	ENSPNAG00000018386	si:dkey-33c12.4	63	32.195	Pygocentrus_nattereri
ENSGACG00000007620	zgc:123010	98	75.472	ENSPNAG00000007579	zgc:123010	72	75.472	Pygocentrus_nattereri
ENSGACG00000007620	zgc:123010	92	34.474	ENSSFOG00015005186	-	64	35.025	Scleropages_formosus
ENSGACG00000007620	zgc:123010	100	60.892	ENSSFOG00015021394	zgc:123010	79	60.892	Scleropages_formosus
ENSGACG00000007620	zgc:123010	93	32.134	ENSSFOG00015009199	-	66	32.134	Scleropages_formosus
ENSGACG00000007620	zgc:123010	96	56.198	ENSSMAG00000021096	-	71	56.198	Scophthalmus_maximus
ENSGACG00000007620	zgc:123010	83	31.267	ENSSMAG00000008147	si:dkey-33c12.4	57	30.848	Scophthalmus_maximus
ENSGACG00000007620	zgc:123010	100	88.204	ENSSMAG00000002904	zgc:123010	72	88.204	Scophthalmus_maximus
ENSGACG00000007620	zgc:123010	96	61.081	ENSSDUG00000014026	-	72	61.081	Seriola_dumerili
ENSGACG00000007620	zgc:123010	90	31.378	ENSSDUG00000003213	si:dkey-33c12.4	62	31.378	Seriola_dumerili
ENSGACG00000007620	zgc:123010	70	31.343	ENSSDUG00000010976	-	54	31.642	Seriola_dumerili
ENSGACG00000007620	zgc:123010	100	89.008	ENSSDUG00000008651	zgc:123010	72	89.008	Seriola_dumerili
ENSGACG00000007620	zgc:123010	100	88.740	ENSSLDG00000019386	zgc:123010	75	88.740	Seriola_lalandi_dorsalis
ENSGACG00000007620	zgc:123010	70	31.642	ENSSLDG00000012846	-	56	31.642	Seriola_lalandi_dorsalis
ENSGACG00000007620	zgc:123010	89	31.105	ENSSLDG00000009448	si:dkey-33c12.4	58	31.105	Seriola_lalandi_dorsalis
ENSGACG00000007620	zgc:123010	83	32.597	ENSSPAG00000022577	-	53	32.597	Stegastes_partitus
ENSGACG00000007620	zgc:123010	69	39.444	ENSSPAG00000004843	-	50	32.317	Stegastes_partitus
ENSGACG00000007620	zgc:123010	100	89.812	ENSSPAG00000013621	zgc:123010	72	89.812	Stegastes_partitus
ENSGACG00000007620	zgc:123010	100	78.552	ENSTRUG00000024824	zgc:123010	73	78.552	Takifugu_rubripes
ENSGACG00000007620	zgc:123010	76	34.985	ENSTRUG00000000057	-	60	34.985	Takifugu_rubripes
ENSGACG00000007620	zgc:123010	81	30.812	ENSTRUG00000022374	si:dkey-33c12.4	51	30.812	Takifugu_rubripes
ENSGACG00000007620	zgc:123010	87	34.146	ENSTNIG00000010542	-	99	34.451	Tetraodon_nigroviridis
ENSGACG00000007620	zgc:123010	87	74.164	ENSTNIG00000001303	zgc:123010	100	74.164	Tetraodon_nigroviridis
ENSGACG00000007620	zgc:123010	64	38.174	ENSTNIG00000001154	-	98	38.174	Tetraodon_nigroviridis
ENSGACG00000007620	zgc:123010	80	50.336	ENSXETG00000033896	-	99	50.336	Xenopus_tropicalis
ENSGACG00000007620	zgc:123010	95	76.022	ENSXCOG00000012281	zgc:123010	83	76.022	Xiphophorus_couchianus
ENSGACG00000007620	zgc:123010	100	83.110	ENSXMAG00000002598	zgc:123010	72	83.110	Xiphophorus_maculatus