EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000007792 (Gene tree)
Gene ID: -
Gene Symbol: cpsf4
Alias: nar|no arches
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2599 bases
Position: chrgroupXI:4787200-4789798
Accession: ZDB-GENE-990415-180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000010328	zf-CCCH	PF00642.24	2.1e-20	1	2
ENSGACP00000010328	zf-CCCH	PF00642.24	2.1e-20	2	2
ENSGACP00000010328	zf-CCHC	PF00098.23	3.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000010350	-	765	-	ENSGACP00000010328	254 (aa)	-	G3NYA8

Gene Model

Click here to download ENSGACG00000007792's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000007792's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000007792	cpsf4	100	82.283	ENSG00000160917	CPSF4	100	97.321	Homo_sapiens
ENSGACG00000007792	cpsf4	65	79.213	ENSAPOG00000004921	cpsf4	100	79.213	Acanthochromis_polyacanthus
ENSGACG00000007792	cpsf4	100	76.384	ENSAMEG00000006252	CPSF4	100	77.491	Ailuropoda_melanoleuca
ENSGACG00000007792	cpsf4	100	87.402	ENSACIG00000009248	cpsf4	100	87.402	Amphilophus_citrinellus
ENSGACG00000007792	cpsf4	100	86.940	ENSAOCG00000019616	cpsf4	100	86.940	Amphiprion_ocellaris
ENSGACG00000007792	cpsf4	100	86.940	ENSAPEG00000011679	cpsf4	100	86.940	Amphiprion_percula
ENSGACG00000007792	cpsf4	100	88.627	ENSATEG00000007010	cpsf4	100	88.627	Anabas_testudineus
ENSGACG00000007792	cpsf4	100	74.539	ENSACAG00000012941	CPSF4	89	74.908	Anolis_carolinensis
ENSGACG00000007792	cpsf4	100	76.384	ENSANAG00000021360	CPSF4	100	77.122	Aotus_nancymaae
ENSGACG00000007792	cpsf4	100	85.448	ENSACLG00000010374	cpsf4	100	85.448	Astatotilapia_calliptera
ENSGACG00000007792	cpsf4	100	78.676	ENSAMXG00000031647	cpsf4	100	80.515	Astyanax_mexicanus
ENSGACG00000007792	cpsf4	100	81.890	ENSBTAG00000002090	CPSF4	100	81.890	Bos_taurus
ENSGACG00000007792	cpsf4	100	76.404	ENSCJAG00000015826	CPSF4	100	77.122	Callithrix_jacchus
ENSGACG00000007792	cpsf4	100	76.384	ENSCAFG00000015036	CPSF4	99	83.432	Canis_familiaris
ENSGACG00000007792	cpsf4	100	71.587	ENSCAFG00020014462	CPSF4	100	72.694	Canis_lupus_dingo
ENSGACG00000007792	cpsf4	100	76.015	ENSCHIG00000014313	CPSF4	100	77.122	Capra_hircus
ENSGACG00000007792	cpsf4	100	82.283	ENSTSYG00000005712	-	100	82.283	Carlito_syrichta
ENSGACG00000007792	cpsf4	89	77.876	ENSTSYG00000008195	-	99	77.872	Carlito_syrichta
ENSGACG00000007792	cpsf4	100	74.118	ENSTSYG00000014604	-	100	74.118	Carlito_syrichta
ENSGACG00000007792	cpsf4	80	75.909	ENSCAPG00000013881	CPSF4	96	71.545	Cavia_aperea
ENSGACG00000007792	cpsf4	100	82.283	ENSCPOG00000001783	CPSF4	100	82.283	Cavia_porcellus
ENSGACG00000007792	cpsf4	100	76.384	ENSCCAG00000028291	CPSF4	100	77.122	Cebus_capucinus
ENSGACG00000007792	cpsf4	100	76.384	ENSCATG00000038440	CPSF4	100	77.122	Cercocebus_atys
ENSGACG00000007792	cpsf4	100	76.384	ENSCLAG00000007050	CPSF4	100	77.122	Chinchilla_lanigera
ENSGACG00000007792	cpsf4	100	76.384	ENSCSAG00000017795	CPSF4	100	77.122	Chlorocebus_sabaeus
ENSGACG00000007792	cpsf4	78	75.926	ENSCPBG00000020869	CPSF4	100	78.341	Chrysemys_picta_bellii
ENSGACG00000007792	cpsf4	66	75.595	ENSCPBG00000010269	-	100	75.595	Chrysemys_picta_bellii
ENSGACG00000007792	cpsf4	96	56.977	ENSCING00000021080	-	97	56.977	Ciona_intestinalis
ENSGACG00000007792	cpsf4	96	52.982	ENSCSAVG00000011469	-	97	52.982	Ciona_savignyi
ENSGACG00000007792	cpsf4	100	76.384	ENSCANG00000019384	CPSF4	100	77.122	Colobus_angolensis_palliatus
ENSGACG00000007792	cpsf4	100	82.283	ENSCGRG00001024184	Cpsf4	100	82.283	Cricetulus_griseus_chok1gshd
ENSGACG00000007792	cpsf4	100	76.384	ENSCGRG00000013892	Cpsf4	100	77.491	Cricetulus_griseus_crigri
ENSGACG00000007792	cpsf4	100	85.448	ENSCSEG00000019055	cpsf4	100	85.448	Cynoglossus_semilaevis
ENSGACG00000007792	cpsf4	100	82.836	ENSCVAG00000016528	cpsf4	100	82.836	Cyprinodon_variegatus
ENSGACG00000007792	cpsf4	100	77.818	ENSDARG00000020217	cpsf4	100	79.121	Danio_rerio
ENSGACG00000007792	cpsf4	100	76.384	ENSDNOG00000006344	CPSF4	100	77.491	Dasypus_novemcinctus
ENSGACG00000007792	cpsf4	79	76.037	ENSDORG00000000742	Cpsf4	100	77.419	Dipodomys_ordii
ENSGACG00000007792	cpsf4	100	53.767	FBgn0015621	Clp	99	54.110	Drosophila_melanogaster
ENSGACG00000007792	cpsf4	74	95.455	ENSETEG00000002608	CPSF4	70	95.455	Echinops_telfairi
ENSGACG00000007792	cpsf4	99	68.651	ENSEBUG00000012552	cpsf4	98	68.651	Eptatretus_burgeri
ENSGACG00000007792	cpsf4	100	82.283	ENSEASG00005002487	CPSF4	100	82.283	Equus_asinus_asinus
ENSGACG00000007792	cpsf4	100	76.384	ENSECAG00000007525	CPSF4	100	77.491	Equus_caballus
ENSGACG00000007792	cpsf4	61	91.304	ENSEEUG00000002158	CPSF4	73	91.304	Erinaceus_europaeus
ENSGACG00000007792	cpsf4	100	79.562	ENSELUG00000011481	cpsf4	100	79.927	Esox_lucius
ENSGACG00000007792	cpsf4	100	76.384	ENSFCAG00000015070	CPSF4	100	77.491	Felis_catus
ENSGACG00000007792	cpsf4	66	55.747	ENSFALG00000012906	-	100	55.747	Ficedula_albicollis
ENSGACG00000007792	cpsf4	100	81.496	ENSFALG00000013799	CPSF4	100	81.496	Ficedula_albicollis
ENSGACG00000007792	cpsf4	90	75.918	ENSFDAG00000014092	CPSF4	100	77.143	Fukomys_damarensis
ENSGACG00000007792	cpsf4	100	83.955	ENSFHEG00000010880	cpsf4	100	83.955	Fundulus_heteroclitus
ENSGACG00000007792	cpsf4	100	86.260	ENSGMOG00000002330	cpsf4	100	86.260	Gadus_morhua
ENSGACG00000007792	cpsf4	99	35.393	ENSGALG00000004441	-	92	35.393	Gallus_gallus
ENSGACG00000007792	cpsf4	100	81.890	ENSGALG00000004714	CPSF4	100	81.890	Gallus_gallus
ENSGACG00000007792	cpsf4	100	83.521	ENSGAFG00000010580	cpsf4	100	83.521	Gambusia_affinis
ENSGACG00000007792	cpsf4	100	76.015	ENSGAGG00000021835	CPSF4	100	77.941	Gopherus_agassizii
ENSGACG00000007792	cpsf4	66	76.048	ENSGAGG00000020579	-	92	76.048	Gopherus_agassizii
ENSGACG00000007792	cpsf4	100	76.384	ENSGGOG00000015131	CPSF4	100	77.122	Gorilla_gorilla
ENSGACG00000007792	cpsf4	100	85.448	ENSHBUG00000013699	cpsf4	100	85.448	Haplochromis_burtoni
ENSGACG00000007792	cpsf4	100	75.458	ENSHGLG00000017150	CPSF4	100	76.923	Heterocephalus_glaber_female
ENSGACG00000007792	cpsf4	86	73.109	ENSHGLG00100009215	-	100	74.790	Heterocephalus_glaber_male
ENSGACG00000007792	cpsf4	100	52.756	ENSHGLG00100017302	-	100	52.756	Heterocephalus_glaber_male
ENSGACG00000007792	cpsf4	100	83.521	ENSHCOG00000004397	cpsf4	100	83.521	Hippocampus_comes
ENSGACG00000007792	cpsf4	100	78.755	ENSIPUG00000017147	cpsf4	100	79.487	Ictalurus_punctatus
ENSGACG00000007792	cpsf4	100	81.890	ENSSTOG00000001688	CPSF4	100	81.890	Ictidomys_tridecemlineatus
ENSGACG00000007792	cpsf4	100	76.384	ENSJJAG00000019426	Cpsf4	100	77.122	Jaculus_jaculus
ENSGACG00000007792	cpsf4	100	84.701	ENSKMAG00000015642	cpsf4	100	84.701	Kryptolebias_marmoratus
ENSGACG00000007792	cpsf4	100	60.000	ENSLACG00000018470	-	100	60.000	Latimeria_chalumnae
ENSGACG00000007792	cpsf4	100	75.735	ENSLACG00000010938	CPSF4	100	75.735	Latimeria_chalumnae
ENSGACG00000007792	cpsf4	100	75.368	ENSLOCG00000004814	cpsf4	100	77.941	Lepisosteus_oculatus
ENSGACG00000007792	cpsf4	100	76.753	ENSLAFG00000000159	CPSF4	100	77.860	Loxodonta_africana
ENSGACG00000007792	cpsf4	100	76.384	ENSMFAG00000001462	CPSF4	100	82.412	Macaca_fascicularis
ENSGACG00000007792	cpsf4	100	76.384	ENSMMUG00000019191	CPSF4	100	77.122	Macaca_mulatta
ENSGACG00000007792	cpsf4	100	76.384	ENSMNEG00000032306	CPSF4	100	77.122	Macaca_nemestrina
ENSGACG00000007792	cpsf4	100	76.384	ENSMLEG00000034721	CPSF4	100	77.122	Mandrillus_leucophaeus
ENSGACG00000007792	cpsf4	100	85.821	ENSMAMG00000006244	cpsf4	100	85.821	Mastacembelus_armatus
ENSGACG00000007792	cpsf4	100	85.448	ENSMZEG00005007515	cpsf4	100	85.448	Maylandia_zebra
ENSGACG00000007792	cpsf4	87	81.818	ENSMGAG00000004235	CPSF4	100	81.818	Meleagris_gallopavo
ENSGACG00000007792	cpsf4	100	76.384	ENSMAUG00000021253	Cpsf4	100	77.491	Mesocricetus_auratus
ENSGACG00000007792	cpsf4	100	76.384	ENSMICG00000017429	CPSF4	100	77.122	Microcebus_murinus
ENSGACG00000007792	cpsf4	100	76.384	ENSMOCG00000014901	Cpsf4	100	77.491	Microtus_ochrogaster
ENSGACG00000007792	cpsf4	100	87.687	ENSMMOG00000001813	cpsf4	100	87.687	Mola_mola
ENSGACG00000007792	cpsf4	100	76.384	ENSMODG00000001367	CPSF4	100	77.491	Monodelphis_domestica
ENSGACG00000007792	cpsf4	100	83.955	ENSMALG00000012611	cpsf4	100	83.955	Monopterus_albus
ENSGACG00000007792	cpsf4	100	82.283	MGP_CAROLIEiJ_G0028012	Cpsf4	100	82.283	Mus_caroli
ENSGACG00000007792	cpsf4	100	82.283	ENSMUSG00000029625	Cpsf4	100	82.283	Mus_musculus
ENSGACG00000007792	cpsf4	100	82.283	MGP_PahariEiJ_G0024581	Cpsf4	100	82.283	Mus_pahari
ENSGACG00000007792	cpsf4	100	81.890	MGP_SPRETEiJ_G0029013	Cpsf4	100	81.496	Mus_spretus
ENSGACG00000007792	cpsf4	100	76.384	ENSMPUG00000016508	CPSF4	100	77.491	Mustela_putorius_furo
ENSGACG00000007792	cpsf4	87	81.364	ENSMLUG00000010980	CPSF4	100	81.364	Myotis_lucifugus
ENSGACG00000007792	cpsf4	100	76.384	ENSNGAG00000001567	Cpsf4	100	77.491	Nannospalax_galili
ENSGACG00000007792	cpsf4	91	85.656	ENSNBRG00000003943	cpsf4	98	85.656	Neolamprologus_brichardi
ENSGACG00000007792	cpsf4	100	82.283	ENSNLEG00000011074	CPSF4	100	81.102	Nomascus_leucogenys
ENSGACG00000007792	cpsf4	100	76.384	ENSMEUG00000006955	CPSF4	100	77.491	Notamacropus_eugenii
ENSGACG00000007792	cpsf4	100	76.015	ENSOPRG00000013663	CPSF4	100	76.753	Ochotona_princeps
ENSGACG00000007792	cpsf4	100	64.729	ENSODEG00000009779	-	100	64.729	Octodon_degus
ENSGACG00000007792	cpsf4	98	69.600	ENSODEG00000018283	-	91	69.600	Octodon_degus
ENSGACG00000007792	cpsf4	100	76.384	ENSODEG00000011181	-	100	77.491	Octodon_degus
ENSGACG00000007792	cpsf4	100	85.821	ENSONIG00000008495	cpsf4	100	85.821	Oreochromis_niloticus
ENSGACG00000007792	cpsf4	87	77.637	ENSOANG00000007729	CPSF4	100	77.637	Ornithorhynchus_anatinus
ENSGACG00000007792	cpsf4	100	51.071	ENSOANG00000009568	-	100	51.071	Ornithorhynchus_anatinus
ENSGACG00000007792	cpsf4	100	76.015	ENSOCUG00000002437	CPSF4	70	76.753	Oryctolagus_cuniculus
ENSGACG00000007792	cpsf4	100	85.075	ENSORLG00000022798	cpsf4	100	85.075	Oryzias_latipes
ENSGACG00000007792	cpsf4	100	85.075	ENSORLG00020008548	cpsf4	100	85.075	Oryzias_latipes_hni
ENSGACG00000007792	cpsf4	100	85.448	ENSORLG00015019575	cpsf4	100	85.448	Oryzias_latipes_hsok
ENSGACG00000007792	cpsf4	100	85.075	ENSOMEG00000005176	cpsf4	100	85.075	Oryzias_melastigma
ENSGACG00000007792	cpsf4	100	76.384	ENSOGAG00000010884	CPSF4	100	77.122	Otolemur_garnettii
ENSGACG00000007792	cpsf4	100	68.364	ENSOARG00000018668	CPSF4	100	68.364	Ovis_aries
ENSGACG00000007792	cpsf4	100	76.384	ENSPPAG00000043355	CPSF4	100	77.122	Pan_paniscus
ENSGACG00000007792	cpsf4	100	76.384	ENSPPRG00000003134	CPSF4	100	77.491	Panthera_pardus
ENSGACG00000007792	cpsf4	89	76.639	ENSPTIG00000005604	CPSF4	90	77.459	Panthera_tigris_altaica
ENSGACG00000007792	cpsf4	100	76.384	ENSPTRG00000019453	CPSF4	100	77.122	Pan_troglodytes
ENSGACG00000007792	cpsf4	100	76.384	ENSPANG00000023123	CPSF4	100	77.122	Papio_anubis
ENSGACG00000007792	cpsf4	100	77.899	ENSPKIG00000014278	cpsf4	100	77.899	Paramormyrops_kingsleyae
ENSGACG00000007792	cpsf4	78	75.463	ENSPSIG00000011229	CPSF4	100	77.880	Pelodiscus_sinensis
ENSGACG00000007792	cpsf4	79	61.692	ENSPSIG00000018198	-	100	61.692	Pelodiscus_sinensis
ENSGACG00000007792	cpsf4	100	80.709	ENSPMGG00000017735	cpsf4	100	80.709	Periophthalmus_magnuspinnatus
ENSGACG00000007792	cpsf4	100	76.384	ENSPEMG00000004508	Cpsf4	100	77.491	Peromyscus_maniculatus_bairdii
ENSGACG00000007792	cpsf4	100	76.384	ENSPCIG00000024776	CPSF4	100	77.491	Phascolarctos_cinereus
ENSGACG00000007792	cpsf4	100	83.521	ENSPFOG00000014912	cpsf4	100	83.521	Poecilia_formosa
ENSGACG00000007792	cpsf4	100	80.709	ENSPLAG00000009599	cpsf4	100	80.709	Poecilia_latipinna
ENSGACG00000007792	cpsf4	100	83.521	ENSPMEG00000009790	cpsf4	100	83.521	Poecilia_mexicana
ENSGACG00000007792	cpsf4	100	83.146	ENSPREG00000018166	cpsf4	100	83.146	Poecilia_reticulata
ENSGACG00000007792	cpsf4	86	75.424	ENSPPYG00000017378	CPSF4	100	76.271	Pongo_abelii
ENSGACG00000007792	cpsf4	100	76.753	ENSPCAG00000001892	CPSF4	100	77.860	Procavia_capensis
ENSGACG00000007792	cpsf4	100	76.384	ENSPCOG00000012771	CPSF4	100	77.491	Propithecus_coquereli
ENSGACG00000007792	cpsf4	100	71.218	ENSPVAG00000007531	CPSF4	100	72.325	Pteropus_vampyrus
ENSGACG00000007792	cpsf4	100	85.448	ENSPNYG00000018559	cpsf4	100	85.448	Pundamilia_nyererei
ENSGACG00000007792	cpsf4	100	80.147	ENSPNAG00000003736	cpsf4	100	80.515	Pygocentrus_nattereri
ENSGACG00000007792	cpsf4	100	81.890	ENSRNOG00000000985	Cpsf4	100	81.890	Rattus_norvegicus
ENSGACG00000007792	cpsf4	86	75.847	ENSRBIG00000033886	CPSF4	100	76.695	Rhinopithecus_bieti
ENSGACG00000007792	cpsf4	100	82.283	ENSRROG00000040431	CPSF4	100	81.102	Rhinopithecus_roxellana
ENSGACG00000007792	cpsf4	100	76.384	ENSSBOG00000020493	CPSF4	100	82.412	Saimiri_boliviensis_boliviensis
ENSGACG00000007792	cpsf4	100	76.384	ENSSHAG00000011533	CPSF4	100	77.491	Sarcophilus_harrisii
ENSGACG00000007792	cpsf4	100	75.899	ENSSFOG00015007883	cpsf4	100	75.899	Scleropages_formosus
ENSGACG00000007792	cpsf4	100	88.583	ENSSMAG00000006374	cpsf4	100	88.583	Scophthalmus_maximus
ENSGACG00000007792	cpsf4	100	86.567	ENSSDUG00000018887	cpsf4	100	86.567	Seriola_dumerili
ENSGACG00000007792	cpsf4	100	86.567	ENSSLDG00000019078	cpsf4	100	86.567	Seriola_lalandi_dorsalis
ENSGACG00000007792	cpsf4	86	75.847	ENSSARG00000012416	CPSF4	100	76.695	Sorex_araneus
ENSGACG00000007792	cpsf4	96	60.324	ENSSPUG00000014803	-	97	60.324	Sphenodon_punctatus
ENSGACG00000007792	cpsf4	100	76.015	ENSSPUG00000003549	CPSF4	100	76.015	Sphenodon_punctatus
ENSGACG00000007792	cpsf4	100	87.795	ENSSPAG00000006174	cpsf4	100	87.795	Stegastes_partitus
ENSGACG00000007792	cpsf4	100	81.890	ENSSSCG00000026896	CPSF4	100	81.102	Sus_scrofa
ENSGACG00000007792	cpsf4	100	80.709	ENSTGUG00000007552	CPSF4	100	80.709	Taeniopygia_guttata
ENSGACG00000007792	cpsf4	100	83.955	ENSTRUG00000024220	cpsf4	100	83.955	Takifugu_rubripes
ENSGACG00000007792	cpsf4	100	84.151	ENSTNIG00000006265	cpsf4	100	85.448	Tetraodon_nigroviridis
ENSGACG00000007792	cpsf4	86	68.644	ENSTBEG00000011406	CPSF4	100	68.220	Tupaia_belangeri
ENSGACG00000007792	cpsf4	79	95.455	ENSTTRG00000003007	CPSF4	100	68.266	Tursiops_truncatus
ENSGACG00000007792	cpsf4	91	80.603	ENSUAMG00000008051	CPSF4	85	80.603	Ursus_americanus
ENSGACG00000007792	cpsf4	100	81.890	ENSUMAG00000009474	CPSF4	100	81.890	Ursus_maritimus
ENSGACG00000007792	cpsf4	100	82.283	ENSVVUG00000008824	CPSF4	100	82.283	Vulpes_vulpes
ENSGACG00000007792	cpsf4	99	58.519	ENSXETG00000004641	cpsf4l	99	58.519	Xenopus_tropicalis
ENSGACG00000007792	cpsf4	100	72.085	ENSXETG00000009892	cpsf4	100	72.954	Xenopus_tropicalis
ENSGACG00000007792	cpsf4	100	83.146	ENSXCOG00000016040	cpsf4	100	83.146	Xiphophorus_couchianus
ENSGACG00000007792	cpsf4	100	83.521	ENSXMAG00000024670	cpsf4	100	83.521	Xiphophorus_maculatus