EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000007834 (Gene tree)
Gene ID: -
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5b
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3553 bases
Position: chrgroupXVIII:6670209-6673761
Accession: ZDB-GENE-040718-354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000010392	RRM_1	PF00076.22	1.1e-26	1	2
ENSGACP00000010392	RRM_1	PF00076.22	1.1e-26	2	2
ENSGACP00000010395	RRM_1	PF00076.22	1.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000010417	-	589	-	ENSGACP00000010395	159 (aa)	-	G3NYH5
ENSGACT00000010414	-	1159	-	ENSGACP00000010392	342 (aa)	-	G3NYH2

Gene Model

Click here to download ENSGACG00000007834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000007834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000007834	srsf5b	86	40.141	ENSGACG00000016921	srsf9	69	34.025
ENSGACG00000007834	srsf5b	86	63.235	ENSGACG00000011761	srsf5a	70	53.036
ENSGACG00000007834	srsf5b	85	42.143	ENSGACG00000011094	-	85	34.025
ENSGACG00000007834	srsf5b	83	59.091	ENSGACG00000002389	srsf4	54	46.473
ENSGACG00000007834	srsf5b	84	43.478	ENSGACG00000020621	srsf1b	64	33.333
ENSGACG00000007834	srsf5b	83	57.576	ENSGACG00000006084	srsf6a	51	48.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000007834	srsf5b	89	70.922	ENSG00000100650	SRSF5	99	70.073	Homo_sapiens
ENSGACG00000007834	srsf5b	86	87.500	ENSAPOG00000008642	srsf5b	100	67.139	Acanthochromis_polyacanthus
ENSGACG00000007834	srsf5b	86	71.324	ENSAMEG00000014574	SRSF5	66	61.134	Ailuropoda_melanoleuca
ENSGACG00000007834	srsf5b	100	77.654	ENSACIG00000010742	srsf5b	100	75.978	Amphilophus_citrinellus
ENSGACG00000007834	srsf5b	86	87.500	ENSAOCG00000005719	srsf5b	100	67.422	Amphiprion_ocellaris
ENSGACG00000007834	srsf5b	86	87.500	ENSAPEG00000007830	srsf5b	100	67.422	Amphiprion_percula
ENSGACG00000007834	srsf5b	86	86.029	ENSATEG00000019112	srsf5b	100	65.341	Anabas_testudineus
ENSGACG00000007834	srsf5b	82	72.308	ENSAPLG00000014681	SRSF5	68	59.109	Anas_platyrhynchos
ENSGACG00000007834	srsf5b	86	72.794	ENSACAG00000005143	SRSF5	68	62.348	Anolis_carolinensis
ENSGACG00000007834	srsf5b	89	70.922	ENSANAG00000027977	-	72	94.366	Aotus_nancymaae
ENSGACG00000007834	srsf5b	84	70.149	ENSANAG00000037529	-	95	67.883	Aotus_nancymaae
ENSGACG00000007834	srsf5b	86	87.500	ENSACLG00000026424	srsf5b	100	68.839	Astatotilapia_calliptera
ENSGACG00000007834	srsf5b	100	81.875	ENSAMXG00000011932	srsf5b	100	78.750	Astyanax_mexicanus
ENSGACG00000007834	srsf5b	86	71.324	ENSBTAG00000011596	SRSF5	66	61.134	Bos_taurus
ENSGACG00000007834	srsf5b	89	70.922	ENSCJAG00000014884	SRSF5	72	94.366	Callithrix_jacchus
ENSGACG00000007834	srsf5b	86	71.324	ENSCAFG00000016589	SRSF5	66	61.134	Canis_familiaris
ENSGACG00000007834	srsf5b	86	71.324	ENSCAFG00020005661	SRSF5	66	61.134	Canis_lupus_dingo
ENSGACG00000007834	srsf5b	86	71.324	ENSCHIG00000016794	SRSF5	66	61.134	Capra_hircus
ENSGACG00000007834	srsf5b	89	70.922	ENSTSYG00000007786	SRSF5	72	94.366	Carlito_syrichta
ENSGACG00000007834	srsf5b	86	71.324	ENSCAPG00000008801	SRSF5	66	61.134	Cavia_aperea
ENSGACG00000007834	srsf5b	86	71.324	ENSCPOG00000039926	SRSF5	66	61.134	Cavia_porcellus
ENSGACG00000007834	srsf5b	89	70.922	ENSCCAG00000029002	SRSF5	72	94.366	Cebus_capucinus
ENSGACG00000007834	srsf5b	89	70.922	ENSCATG00000045051	SRSF5	72	94.366	Cercocebus_atys
ENSGACG00000007834	srsf5b	86	71.324	ENSCLAG00000004755	SRSF5	67	61.134	Chinchilla_lanigera
ENSGACG00000007834	srsf5b	86	71.324	ENSCSAG00000013041	SRSF5	66	61.134	Chlorocebus_sabaeus
ENSGACG00000007834	srsf5b	86	71.324	ENSCPBG00000021653	SRSF5	68	61.538	Chrysemys_picta_bellii
ENSGACG00000007834	srsf5b	89	70.922	ENSCANG00000030560	SRSF5	72	94.366	Colobus_angolensis_palliatus
ENSGACG00000007834	srsf5b	86	71.324	ENSCGRG00001015339	Srsf5	67	61.134	Cricetulus_griseus_chok1gshd
ENSGACG00000007834	srsf5b	86	71.324	ENSCGRG00000009833	Srsf5	67	61.134	Cricetulus_griseus_crigri
ENSGACG00000007834	srsf5b	86	88.235	ENSCSEG00000003801	srsf5b	65	68.699	Cynoglossus_semilaevis
ENSGACG00000007834	srsf5b	86	83.824	ENSCVAG00000017240	srsf5b	87	53.846	Cyprinodon_variegatus
ENSGACG00000007834	srsf5b	97	82.581	ENSDARG00000027734	srsf5b	93	78.014	Danio_rerio
ENSGACG00000007834	srsf5b	86	71.324	ENSDNOG00000006160	SRSF5	67	61.134	Dasypus_novemcinctus
ENSGACG00000007834	srsf5b	86	71.324	ENSDORG00000003989	Srsf5	67	61.134	Dipodomys_ordii
ENSGACG00000007834	srsf5b	86	67.647	ENSETEG00000020396	SRSF5	67	58.537	Echinops_telfairi
ENSGACG00000007834	srsf5b	86	55.147	ENSEBUG00000006229	srsf5b	74	45.059	Eptatretus_burgeri
ENSGACG00000007834	srsf5b	86	71.324	ENSEASG00005016615	SRSF5	66	61.134	Equus_asinus_asinus
ENSGACG00000007834	srsf5b	89	70.922	ENSECAG00000026873	SRSF5	98	65.101	Equus_caballus
ENSGACG00000007834	srsf5b	100	80.117	ENSELUG00000019852	srsf5b	100	78.363	Esox_lucius
ENSGACG00000007834	srsf5b	89	70.922	ENSFCAG00000008848	SRSF5	71	94.366	Felis_catus
ENSGACG00000007834	srsf5b	86	71.324	ENSFALG00000004979	SRSF5	68	60.569	Ficedula_albicollis
ENSGACG00000007834	srsf5b	86	71.324	ENSFDAG00000011562	SRSF5	67	61.134	Fukomys_damarensis
ENSGACG00000007834	srsf5b	86	83.824	ENSFHEG00000009476	srsf5b	88	66.163	Fundulus_heteroclitus
ENSGACG00000007834	srsf5b	86	90.441	ENSGMOG00000000595	srsf5b	99	74.699	Gadus_morhua
ENSGACG00000007834	srsf5b	89	70.213	ENSGALG00000009421	SRSF5	98	64.430	Gallus_gallus
ENSGACG00000007834	srsf5b	86	83.824	ENSGAFG00000002865	srsf5b	62	67.886	Gambusia_affinis
ENSGACG00000007834	srsf5b	86	71.324	ENSGAGG00000004447	SRSF5	68	61.538	Gopherus_agassizii
ENSGACG00000007834	srsf5b	89	70.922	ENSGGOG00000016462	SRSF5	72	94.366	Gorilla_gorilla
ENSGACG00000007834	srsf5b	86	87.500	ENSHBUG00000012462	srsf5b	100	79.452	Haplochromis_burtoni
ENSGACG00000007834	srsf5b	86	70.588	ENSHGLG00000010147	SRSF5	67	60.729	Heterocephalus_glaber_female
ENSGACG00000007834	srsf5b	86	70.588	ENSHGLG00100015328	SRSF5	67	60.729	Heterocephalus_glaber_male
ENSGACG00000007834	srsf5b	86	84.559	ENSHCOG00000005592	srsf5b	65	67.755	Hippocampus_comes
ENSGACG00000007834	srsf5b	86	71.324	ENSSTOG00000020672	SRSF5	67	61.134	Ictidomys_tridecemlineatus
ENSGACG00000007834	srsf5b	86	71.324	ENSJJAG00000001688	Srsf5	66	61.134	Jaculus_jaculus
ENSGACG00000007834	srsf5b	100	86.250	ENSKMAG00000020486	srsf5b	100	83.750	Kryptolebias_marmoratus
ENSGACG00000007834	srsf5b	86	86.029	ENSLBEG00000013647	srsf5b	100	66.572	Labrus_bergylta
ENSGACG00000007834	srsf5b	86	71.324	ENSLACG00000005874	SRSF5	67	60.816	Latimeria_chalumnae
ENSGACG00000007834	srsf5b	86	73.759	ENSLOCG00000012438	srsf5b	69	61.446	Lepisosteus_oculatus
ENSGACG00000007834	srsf5b	86	70.588	ENSLAFG00000005260	SRSF5	66	60.729	Loxodonta_africana
ENSGACG00000007834	srsf5b	89	70.922	ENSMFAG00000002393	SRSF5	72	94.366	Macaca_fascicularis
ENSGACG00000007834	srsf5b	89	70.922	ENSMNEG00000030872	SRSF5	72	94.366	Macaca_nemestrina
ENSGACG00000007834	srsf5b	89	70.922	ENSMLEG00000030017	SRSF5	72	94.366	Mandrillus_leucophaeus
ENSGACG00000007834	srsf5b	86	84.559	ENSMAMG00000002673	srsf5b	100	67.139	Mastacembelus_armatus
ENSGACG00000007834	srsf5b	86	87.500	ENSMZEG00005003550	srsf5b	100	68.839	Maylandia_zebra
ENSGACG00000007834	srsf5b	61	59.794	ENSMGAG00000011835	SRSF5	62	54.106	Meleagris_gallopavo
ENSGACG00000007834	srsf5b	86	71.324	ENSMAUG00000009544	Srsf5	67	61.134	Mesocricetus_auratus
ENSGACG00000007834	srsf5b	89	70.922	ENSMICG00000037432	-	72	94.366	Microcebus_murinus
ENSGACG00000007834	srsf5b	86	71.324	ENSMOCG00000013134	Srsf5	67	61.134	Microtus_ochrogaster
ENSGACG00000007834	srsf5b	99	72.050	ENSMMOG00000000137	srsf5b	94	75.540	Mola_mola
ENSGACG00000007834	srsf5b	86	71.324	ENSMODG00000011362	SRSF5	68	61.538	Monodelphis_domestica
ENSGACG00000007834	srsf5b	100	86.875	ENSMALG00000021875	srsf5b	100	86.250	Monopterus_albus
ENSGACG00000007834	srsf5b	86	71.324	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSGACG00000007834	srsf5b	86	71.324	MGP_PahariEiJ_G0029659	Srsf5	67	61.134	Mus_pahari
ENSGACG00000007834	srsf5b	86	71.324	ENSMPUG00000007458	SRSF5	66	61.134	Mustela_putorius_furo
ENSGACG00000007834	srsf5b	86	71.324	ENSMLUG00000011939	SRSF5	65	61.134	Myotis_lucifugus
ENSGACG00000007834	srsf5b	86	71.324	ENSNGAG00000010073	-	67	61.134	Nannospalax_galili
ENSGACG00000007834	srsf5b	86	88.971	ENSNBRG00000001285	srsf5b	100	67.236	Neolamprologus_brichardi
ENSGACG00000007834	srsf5b	89	70.922	ENSNLEG00000001615	SRSF5	72	94.366	Nomascus_leucogenys
ENSGACG00000007834	srsf5b	86	71.324	ENSOPRG00000008286	SRSF5	64	61.134	Ochotona_princeps
ENSGACG00000007834	srsf5b	86	70.588	ENSODEG00000000700	-	68	59.919	Octodon_degus
ENSGACG00000007834	srsf5b	86	71.324	ENSODEG00000013469	-	67	61.134	Octodon_degus
ENSGACG00000007834	srsf5b	86	87.500	ENSONIG00000005759	srsf5b	100	68.839	Oreochromis_niloticus
ENSGACG00000007834	srsf5b	86	65.441	ENSOANG00000013336	SRSF5	62	60.515	Ornithorhynchus_anatinus
ENSGACG00000007834	srsf5b	86	71.324	ENSOCUG00000009274	SRSF5	65	61.134	Oryctolagus_cuniculus
ENSGACG00000007834	srsf5b	86	83.088	ENSORLG00000029854	srsf5b	58	66.260	Oryzias_latipes
ENSGACG00000007834	srsf5b	86	88.235	ENSORLG00015001720	srsf5b	100	66.952	Oryzias_latipes_hsok
ENSGACG00000007834	srsf5b	86	71.324	ENSOGAG00000015122	SRSF5	67	61.134	Otolemur_garnettii
ENSGACG00000007834	srsf5b	89	70.922	ENSPPAG00000029921	SRSF5	72	94.366	Pan_paniscus
ENSGACG00000007834	srsf5b	89	70.922	ENSPPRG00000012903	SRSF5	71	94.366	Panthera_pardus
ENSGACG00000007834	srsf5b	89	70.922	ENSPTIG00000018589	SRSF5	71	94.366	Panthera_tigris_altaica
ENSGACG00000007834	srsf5b	89	70.922	ENSPTRG00000006488	SRSF5	72	94.366	Pan_troglodytes
ENSGACG00000007834	srsf5b	89	70.922	ENSPANG00000021091	SRSF5	72	94.366	Papio_anubis
ENSGACG00000007834	srsf5b	86	71.324	ENSPSIG00000012522	SRSF5	68	61.538	Pelodiscus_sinensis
ENSGACG00000007834	srsf5b	89	83.099	ENSPMGG00000021646	srsf5b	98	81.507	Periophthalmus_magnuspinnatus
ENSGACG00000007834	srsf5b	86	71.324	ENSPEMG00000020173	Srsf5	67	61.134	Peromyscus_maniculatus_bairdii
ENSGACG00000007834	srsf5b	86	55.072	ENSPMAG00000007790	srsf5b	67	48.387	Petromyzon_marinus
ENSGACG00000007834	srsf5b	86	71.324	ENSPCIG00000011877	SRSF5	68	61.538	Phascolarctos_cinereus
ENSGACG00000007834	srsf5b	86	87.500	ENSPFOG00000017700	srsf5b	62	68.293	Poecilia_formosa
ENSGACG00000007834	srsf5b	86	88.235	ENSPLAG00000006480	srsf5b	62	69.512	Poecilia_latipinna
ENSGACG00000007834	srsf5b	100	86.250	ENSPMEG00000012751	srsf5b	100	83.125	Poecilia_mexicana
ENSGACG00000007834	srsf5b	86	90.441	ENSPREG00000010381	srsf5b	100	69.613	Poecilia_reticulata
ENSGACG00000007834	srsf5b	86	71.324	ENSPPYG00000005945	SRSF5	66	61.134	Pongo_abelii
ENSGACG00000007834	srsf5b	86	70.588	ENSPCAG00000004405	SRSF5	100	56.132	Procavia_capensis
ENSGACG00000007834	srsf5b	89	70.922	ENSPCOG00000014442	SRSF5	98	65.101	Propithecus_coquereli
ENSGACG00000007834	srsf5b	86	87.500	ENSPNYG00000002669	srsf5b	96	82.014	Pundamilia_nyererei
ENSGACG00000007834	srsf5b	100	81.250	ENSPNAG00000011262	srsf5b	100	78.125	Pygocentrus_nattereri
ENSGACG00000007834	srsf5b	86	71.324	ENSRNOG00000005513	Srsf5	67	61.134	Rattus_norvegicus
ENSGACG00000007834	srsf5b	89	70.922	ENSRBIG00000013003	SRSF5	72	94.366	Rhinopithecus_bieti
ENSGACG00000007834	srsf5b	89	70.922	ENSRROG00000043407	SRSF5	72	94.366	Rhinopithecus_roxellana
ENSGACG00000007834	srsf5b	89	70.922	ENSSBOG00000030784	SRSF5	72	94.366	Saimiri_boliviensis_boliviensis
ENSGACG00000007834	srsf5b	86	71.324	ENSSHAG00000002871	SRSF5	68	61.538	Sarcophilus_harrisii
ENSGACG00000007834	srsf5b	86	89.362	ENSSMAG00000019728	srsf5b	62	71.713	Scophthalmus_maximus
ENSGACG00000007834	srsf5b	86	83.824	ENSSDUG00000005766	srsf5b	92	66.044	Seriola_dumerili
ENSGACG00000007834	srsf5b	100	85.000	ENSSLDG00000023255	srsf5b	100	84.375	Seriola_lalandi_dorsalis
ENSGACG00000007834	srsf5b	89	71.233	ENSSPUG00000002464	SRSF5	98	63.291	Sphenodon_punctatus
ENSGACG00000007834	srsf5b	86	87.500	ENSSPAG00000015325	srsf5b	100	67.422	Stegastes_partitus
ENSGACG00000007834	srsf5b	86	71.324	ENSSSCG00000032583	SRSF5	66	61.134	Sus_scrofa
ENSGACG00000007834	srsf5b	86	71.324	ENSTGUG00000011425	SRSF5	68	60.569	Taeniopygia_guttata
ENSGACG00000007834	srsf5b	86	79.412	ENSTRUG00000017811	srsf5b	59	65.306	Takifugu_rubripes
ENSGACG00000007834	srsf5b	86	78.676	ENSTNIG00000016411	srsf5b	95	65.432	Tetraodon_nigroviridis
ENSGACG00000007834	srsf5b	86	71.324	ENSTBEG00000001972	SRSF5	65	61.538	Tupaia_belangeri
ENSGACG00000007834	srsf5b	85	71.111	ENSTTRG00000003318	SRSF5	66	60.976	Tursiops_truncatus
ENSGACG00000007834	srsf5b	86	71.324	ENSUAMG00000014184	SRSF5	66	61.134	Ursus_americanus
ENSGACG00000007834	srsf5b	86	71.324	ENSUMAG00000009827	SRSF5	66	61.134	Ursus_maritimus
ENSGACG00000007834	srsf5b	86	71.324	ENSVPAG00000006448	SRSF5	67	61.134	Vicugna_pacos
ENSGACG00000007834	srsf5b	86	71.324	ENSVVUG00000003790	SRSF5	66	61.134	Vulpes_vulpes
ENSGACG00000007834	srsf5b	86	72.059	ENSXETG00000002211	srsf5	67	60.236	Xenopus_tropicalis
ENSGACG00000007834	srsf5b	86	88.235	ENSXCOG00000001570	srsf5b	100	60.169	Xiphophorus_couchianus
ENSGACG00000007834	srsf5b	100	86.875	ENSXMAG00000026416	srsf5b	100	85.000	Xiphophorus_maculatus