EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000008177 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-110g7.8
Alias: sb:eu2463
Full Name: si:dkey-110g7.8
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 1828 bases
Position: chrgroupXI:5083835-5085662
Accession: ZDB-GENE-131121-280
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000010816	MMR_HSR1	PF01926.23	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000010839	-	1282	-	ENSGACP00000010816	277 (aa)	-	G3NZP3

Gene Model

Click here to download ENSGACG00000008177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000008177's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000008177	si:dkey-110g7.8	66	32.796	ENSGACG00000018975	-	56	33.750
ENSGACG00000008177	si:dkey-110g7.8	67	32.323	ENSGACG00000018976	-	72	31.937
ENSGACG00000008177	si:dkey-110g7.8	59	32.934	ENSGACG00000018973	-	65	32.500
ENSGACG00000008177	si:dkey-110g7.8	68	31.188	ENSGACG00000018978	-	67	31.937
ENSGACG00000008177	si:dkey-110g7.8	68	33.838	ENSGACG00000007287	-	67	33.161
ENSGACG00000008177	si:dkey-110g7.8	89	33.784	ENSGACG00000018003	-	71	36.041
ENSGACG00000008177	si:dkey-110g7.8	67	35.602	ENSGACG00000001198	-	63	35.676
ENSGACG00000008177	si:dkey-110g7.8	69	34.872	ENSGACG00000016194	-	56	33.511
ENSGACG00000008177	si:dkey-110g7.8	67	30.688	ENSGACG00000002627	-	70	30.055
ENSGACG00000008177	si:dkey-110g7.8	66	31.183	ENSGACG00000001202	-	74	31.319
ENSGACG00000008177	si:dkey-110g7.8	67	33.684	ENSGACG00000018874	-	71	32.787
ENSGACG00000008177	si:dkey-110g7.8	67	33.684	ENSGACG00000018877	-	84	32.787
ENSGACG00000008177	si:dkey-110g7.8	72	34.951	ENSGACG00000013053	-	81	34.951
ENSGACG00000008177	si:dkey-110g7.8	77	34.419	ENSGACG00000018283	zgc:113625	95	33.953
ENSGACG00000008177	si:dkey-110g7.8	67	35.079	ENSGACG00000006044	-	69	34.783
ENSGACG00000008177	si:dkey-110g7.8	68	33.679	ENSGACG00000008318	-	66	33.679
ENSGACG00000008177	si:dkey-110g7.8	68	31.414	ENSGACG00000018880	-	73	31.551
ENSGACG00000008177	si:dkey-110g7.8	58	32.919	ENSGACG00000018058	-	62	32.121

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000008177	si:dkey-110g7.8	100	72.954	ENSELUG00000010634	si:dkey-110g7.8	94	73.665	Esox_lucius
ENSGACG00000008177	si:dkey-110g7.8	100	91.007	ENSGMOG00000014927	si:dkey-110g7.8	100	91.007	Gadus_morhua
ENSGACG00000008177	si:dkey-110g7.8	91	53.937	ENSPNAG00000007053	si:dkey-110g7.8	93	51.880	Pygocentrus_nattereri
ENSGACG00000008177	si:dkey-110g7.8	100	97.473	ENSSDUG00000018096	si:dkey-110g7.8	100	97.473	Seriola_dumerili
ENSGACG00000008177	si:dkey-110g7.8	80	96.833	ENSSLDG00000020370	si:dkey-110g7.8	88	96.833	Seriola_lalandi_dorsalis