EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000008255 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-275j6.5
Alias: gb:ct586343
Full Name: si:ch211-275j6.5
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 1212 bases
Position: chrgroupXIII:8305571-8306782
Accession: ZDB-GENE-130109-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000010906	RF-1	PF00472.20	5.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000010929	-	841	-	ENSGACP00000010906	159 (aa)	-	G3NZY3

Gene Model

Click here to download ENSGACG00000008255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000008255's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000008255	si:ch211-275j6.5	79	61.417	ENSG00000130921	C12orf65	86	63.333	Homo_sapiens
ENSGACG00000008255	si:ch211-275j6.5	97	76.129	ENSAPOG00000000995	si:ch211-275j6.5	94	76.129	Acanthochromis_polyacanthus
ENSGACG00000008255	si:ch211-275j6.5	52	72.289	ENSAMEG00000015144	C12orf65	81	57.971	Ailuropoda_melanoleuca
ENSGACG00000008255	si:ch211-275j6.5	96	77.778	ENSACIG00000001644	si:ch211-275j6.5	96	77.778	Amphilophus_citrinellus
ENSGACG00000008255	si:ch211-275j6.5	99	77.070	ENSAOCG00000005589	si:ch211-275j6.5	97	77.419	Amphiprion_ocellaris
ENSGACG00000008255	si:ch211-275j6.5	97	76.774	ENSAPEG00000024618	si:ch211-275j6.5	94	76.774	Amphiprion_percula
ENSGACG00000008255	si:ch211-275j6.5	97	74.194	ENSATEG00000011661	si:ch211-275j6.5	82	74.194	Anabas_testudineus
ENSGACG00000008255	si:ch211-275j6.5	75	65.833	ENSAPLG00000016073	C12orf65	100	65.833	Anas_platyrhynchos
ENSGACG00000008255	si:ch211-275j6.5	93	59.732	ENSACAG00000015561	C12orf65	73	59.732	Anolis_carolinensis
ENSGACG00000008255	si:ch211-275j6.5	61	69.697	ENSANAG00000022881	C12orf65	82	60.294	Aotus_nancymaae
ENSGACG00000008255	si:ch211-275j6.5	89	82.979	ENSACLG00000023906	si:ch211-275j6.5	87	82.979	Astatotilapia_calliptera
ENSGACG00000008255	si:ch211-275j6.5	96	61.688	ENSAMXG00000031765	si:ch211-275j6.5	94	61.688	Astyanax_mexicanus
ENSGACG00000008255	si:ch211-275j6.5	87	60.284	ENSBTAG00000020503	C17H12orf65	81	60.284	Bos_taurus
ENSGACG00000008255	si:ch211-275j6.5	67	65.138	ENSCJAG00000016579	C12orf65	88	57.534	Callithrix_jacchus
ENSGACG00000008255	si:ch211-275j6.5	68	68.519	ENSCAFG00000007512	C26H12orf65	51	65.289	Canis_familiaris
ENSGACG00000008255	si:ch211-275j6.5	69	67.890	ENSCAFG00020016169	C12orf65	73	65.289	Canis_lupus_dingo
ENSGACG00000008255	si:ch211-275j6.5	87	60.284	ENSCHIG00000022229	C12orf65	79	60.284	Capra_hircus
ENSGACG00000008255	si:ch211-275j6.5	56	68.539	ENSCAPG00000014691	C12orf65	82	51.948	Cavia_aperea
ENSGACG00000008255	si:ch211-275j6.5	65	63.107	ENSCPOG00000007583	C12orf65	73	57.353	Cavia_porcellus
ENSGACG00000008255	si:ch211-275j6.5	69	65.179	ENSCATG00000040685	C12orf65	89	57.047	Cercocebus_atys
ENSGACG00000008255	si:ch211-275j6.5	62	65.347	ENSCLAG00000014329	C12orf65	68	61.111	Chinchilla_lanigera
ENSGACG00000008255	si:ch211-275j6.5	69	65.179	ENSCSAG00000002068	C12orf65	87	57.047	Chlorocebus_sabaeus
ENSGACG00000008255	si:ch211-275j6.5	86	56.204	ENSCPBG00000025970	C12orf65	80	56.204	Chrysemys_picta_bellii
ENSGACG00000008255	si:ch211-275j6.5	73	60.169	ENSCGRG00001013424	2810006K23Rik	80	54.248	Cricetulus_griseus_chok1gshd
ENSGACG00000008255	si:ch211-275j6.5	73	60.169	ENSCGRG00000003037	2810006K23Rik	80	54.248	Cricetulus_griseus_crigri
ENSGACG00000008255	si:ch211-275j6.5	85	65.441	ENSCSEG00000014536	si:ch211-275j6.5	81	65.441	Cynoglossus_semilaevis
ENSGACG00000008255	si:ch211-275j6.5	95	70.861	ENSCVAG00000023000	si:ch211-275j6.5	87	70.861	Cyprinodon_variegatus
ENSGACG00000008255	si:ch211-275j6.5	75	72.269	ENSDARG00000097803	si:ch211-275j6.5	87	72.269	Danio_rerio
ENSGACG00000008255	si:ch211-275j6.5	72	54.783	ENSDNOG00000034728	C12orf65	84	51.799	Dasypus_novemcinctus
ENSGACG00000008255	si:ch211-275j6.5	64	66.019	ENSDORG00000026069	2810006K23Rik	72	59.524	Dipodomys_ordii
ENSGACG00000008255	si:ch211-275j6.5	74	48.718	FBgn0050100	CG30100	78	48.718	Drosophila_melanogaster
ENSGACG00000008255	si:ch211-275j6.5	71	60.000	ENSETEG00000005627	C12orf65	88	55.102	Echinops_telfairi
ENSGACG00000008255	si:ch211-275j6.5	63	69.000	ENSEASG00005012587	C12orf65	78	61.538	Equus_asinus_asinus
ENSGACG00000008255	si:ch211-275j6.5	63	68.000	ENSECAG00000001057	C8H12orf65	78	60.769	Equus_caballus
ENSGACG00000008255	si:ch211-275j6.5	67	67.593	ENSEEUG00000007231	C12orf65	82	60.870	Erinaceus_europaeus
ENSGACG00000008255	si:ch211-275j6.5	96	63.399	ENSELUG00000015178	lg13h12orf65	91	63.399	Esox_lucius
ENSGACG00000008255	si:ch211-275j6.5	72	57.812	ENSFCAG00000015328	C12orf65	94	54.430	Felis_catus
ENSGACG00000008255	si:ch211-275j6.5	63	69.000	ENSFALG00000009261	C12orf65	76	62.295	Ficedula_albicollis
ENSGACG00000008255	si:ch211-275j6.5	100	69.182	ENSFHEG00000017567	si:ch211-275j6.5	94	69.182	Fundulus_heteroclitus
ENSGACG00000008255	si:ch211-275j6.5	82	70.992	ENSGMOG00000012139	si:ch211-275j6.5	89	70.992	Gadus_morhua
ENSGACG00000008255	si:ch211-275j6.5	77	61.475	ENSGALG00000029390	C15H12ORF65	74	61.475	Gallus_gallus
ENSGACG00000008255	si:ch211-275j6.5	54	69.767	ENSGAGG00000000823	C12orf65	69	65.347	Gopherus_agassizii
ENSGACG00000008255	si:ch211-275j6.5	79	61.417	ENSGGOG00000012850	C12orf65	87	57.534	Gorilla_gorilla
ENSGACG00000008255	si:ch211-275j6.5	89	82.979	ENSHBUG00000007273	si:ch211-275j6.5	87	82.979	Haplochromis_burtoni
ENSGACG00000008255	si:ch211-275j6.5	59	69.792	ENSHGLG00000010966	C12orf65	68	63.492	Heterocephalus_glaber_female
ENSGACG00000008255	si:ch211-275j6.5	59	69.792	ENSHGLG00100018631	C12orf65	68	63.492	Heterocephalus_glaber_male
ENSGACG00000008255	si:ch211-275j6.5	95	68.421	ENSHCOG00000019848	si:ch211-275j6.5	89	68.421	Hippocampus_comes
ENSGACG00000008255	si:ch211-275j6.5	79	68.800	ENSIPUG00000020793	si:ch211-275j6.5	77	68.800	Ictalurus_punctatus
ENSGACG00000008255	si:ch211-275j6.5	72	64.103	ENSSTOG00000016463	C12orf65	74	61.240	Ictidomys_tridecemlineatus
ENSGACG00000008255	si:ch211-275j6.5	80	55.039	ENSJJAG00000023360	2810006K23Rik	69	55.039	Jaculus_jaculus
ENSGACG00000008255	si:ch211-275j6.5	95	73.510	ENSKMAG00000018733	si:ch211-275j6.5	94	73.510	Kryptolebias_marmoratus
ENSGACG00000008255	si:ch211-275j6.5	73	69.828	ENSLACG00000017355	C12orf65	70	69.828	Latimeria_chalumnae
ENSGACG00000008255	si:ch211-275j6.5	76	68.595	ENSLOCG00000005702	si:ch211-275j6.5	100	68.595	Lepisosteus_oculatus
ENSGACG00000008255	si:ch211-275j6.5	74	63.248	ENSLAFG00000002134	C12orf65	70	63.248	Loxodonta_africana
ENSGACG00000008255	si:ch211-275j6.5	69	65.179	ENSMMUG00000031495	C12orf65	89	57.047	Macaca_mulatta
ENSGACG00000008255	si:ch211-275j6.5	69	65.179	ENSMNEG00000044673	C12orf65	89	57.718	Macaca_nemestrina
ENSGACG00000008255	si:ch211-275j6.5	69	65.179	ENSMLEG00000044309	C12orf65	89	57.047	Mandrillus_leucophaeus
ENSGACG00000008255	si:ch211-275j6.5	100	77.987	ENSMAMG00000017366	si:ch211-275j6.5	94	77.987	Mastacembelus_armatus
ENSGACG00000008255	si:ch211-275j6.5	89	82.979	ENSMZEG00005000938	si:ch211-275j6.5	87	82.979	Maylandia_zebra
ENSGACG00000008255	si:ch211-275j6.5	68	68.519	ENSMGAG00000003354	C12orf65	79	68.519	Meleagris_gallopavo
ENSGACG00000008255	si:ch211-275j6.5	70	61.062	ENSMAUG00000010304	2810006K23Rik	85	61.062	Mesocricetus_auratus
ENSGACG00000008255	si:ch211-275j6.5	60	70.103	ENSMICG00000037138	C12orf65	84	59.574	Microcebus_murinus
ENSGACG00000008255	si:ch211-275j6.5	78	59.055	ENSMOCG00000017477	2810006K23Rik	85	53.086	Microtus_ochrogaster
ENSGACG00000008255	si:ch211-275j6.5	94	78.667	ENSMMOG00000017134	si:ch211-275j6.5	88	78.667	Mola_mola
ENSGACG00000008255	si:ch211-275j6.5	77	59.350	ENSMODG00000012450	C12orf65	71	59.836	Monodelphis_domestica
ENSGACG00000008255	si:ch211-275j6.5	100	77.358	ENSMALG00000012291	si:ch211-275j6.5	94	77.358	Monopterus_albus
ENSGACG00000008255	si:ch211-275j6.5	67	62.385	MGP_CAROLIEiJ_G0027747	2810006K23Rik	74	57.554	Mus_caroli
ENSGACG00000008255	si:ch211-275j6.5	63	66.000	ENSMUSG00000047635	2810006K23Rik	70	60.000	Mus_musculus
ENSGACG00000008255	si:ch211-275j6.5	63	65.000	MGP_SPRETEiJ_G0028745	2810006K23Rik	70	59.231	Mus_spretus
ENSGACG00000008255	si:ch211-275j6.5	83	57.664	ENSMPUG00000001679	C12orf65	87	55.195	Mustela_putorius_furo
ENSGACG00000008255	si:ch211-275j6.5	92	52.740	ENSMLUG00000007001	C12orf65	88	52.740	Myotis_lucifugus
ENSGACG00000008255	si:ch211-275j6.5	78	61.111	ENSNGAG00000010625	2810006K23Rik	70	61.111	Nannospalax_galili
ENSGACG00000008255	si:ch211-275j6.5	89	82.979	ENSNBRG00000008082	si:ch211-275j6.5	87	82.979	Neolamprologus_brichardi
ENSGACG00000008255	si:ch211-275j6.5	79	61.417	ENSNLEG00000001470	C12orf65	87	57.534	Nomascus_leucogenys
ENSGACG00000008255	si:ch211-275j6.5	72	62.609	ENSMEUG00000009430	C12orf65	82	58.462	Notamacropus_eugenii
ENSGACG00000008255	si:ch211-275j6.5	82	59.848	ENSOPRG00000011029	C12orf65	83	59.848	Ochotona_princeps
ENSGACG00000008255	si:ch211-275j6.5	81	58.915	ENSODEG00000011382	-	73	59.375	Octodon_degus
ENSGACG00000008255	si:ch211-275j6.5	98	73.718	ENSONIG00000013298	si:ch211-275j6.5	93	73.718	Oreochromis_niloticus
ENSGACG00000008255	si:ch211-275j6.5	72	66.667	ENSOANG00000012866	C12orf65	68	65.254	Ornithorhynchus_anatinus
ENSGACG00000008255	si:ch211-275j6.5	70	62.832	ENSOCUG00000011888	C12orf65	76	62.832	Oryctolagus_cuniculus
ENSGACG00000008255	si:ch211-275j6.5	97	76.774	ENSORLG00000006153	si:ch211-275j6.5	92	76.774	Oryzias_latipes
ENSGACG00000008255	si:ch211-275j6.5	97	77.419	ENSORLG00020017188	si:ch211-275j6.5	92	77.419	Oryzias_latipes_hni
ENSGACG00000008255	si:ch211-275j6.5	97	76.774	ENSORLG00015005780	c9h12orf65	92	76.774	Oryzias_latipes_hsok
ENSGACG00000008255	si:ch211-275j6.5	100	73.750	ENSOMEG00000001663	si:ch211-275j6.5	95	73.750	Oryzias_melastigma
ENSGACG00000008255	si:ch211-275j6.5	62	66.000	ENSOGAG00000010778	C12orf65	79	60.465	Otolemur_garnettii
ENSGACG00000008255	si:ch211-275j6.5	87	58.865	ENSOARG00000005214	C12orf65	82	58.865	Ovis_aries
ENSGACG00000008255	si:ch211-275j6.5	79	61.417	ENSPPAG00000029654	C12orf65	87	57.534	Pan_paniscus
ENSGACG00000008255	si:ch211-275j6.5	91	55.696	ENSPPRG00000024772	C12orf65	94	55.696	Panthera_pardus
ENSGACG00000008255	si:ch211-275j6.5	91	55.696	ENSPTIG00000011744	C12orf65	94	55.696	Panthera_tigris_altaica
ENSGACG00000008255	si:ch211-275j6.5	79	61.417	ENSPTRG00000005595	C12H12orf65	87	57.534	Pan_troglodytes
ENSGACG00000008255	si:ch211-275j6.5	69	65.179	ENSPANG00000015388	C12orf65	89	57.047	Papio_anubis
ENSGACG00000008255	si:ch211-275j6.5	86	67.153	ENSPKIG00000001571	si:ch211-275j6.5	82	67.153	Paramormyrops_kingsleyae
ENSGACG00000008255	si:ch211-275j6.5	86	58.394	ENSPSIG00000013010	C12orf65	73	58.394	Pelodiscus_sinensis
ENSGACG00000008255	si:ch211-275j6.5	95	66.887	ENSPMGG00000018342	si:ch211-275j6.5	87	66.887	Periophthalmus_magnuspinnatus
ENSGACG00000008255	si:ch211-275j6.5	71	55.752	ENSPMAG00000000514	si:ch211-275j6.5	99	55.752	Petromyzon_marinus
ENSGACG00000008255	si:ch211-275j6.5	70	62.162	ENSPCIG00000010996	C12orf65	64	62.162	Phascolarctos_cinereus
ENSGACG00000008255	si:ch211-275j6.5	94	71.812	ENSPLAG00000001661	si:ch211-275j6.5	92	69.032	Poecilia_latipinna
ENSGACG00000008255	si:ch211-275j6.5	97	69.677	ENSPMEG00000009201	si:ch211-275j6.5	92	69.677	Poecilia_mexicana
ENSGACG00000008255	si:ch211-275j6.5	97	69.677	ENSPMEG00000018566	si:ch211-275j6.5	92	69.677	Poecilia_mexicana
ENSGACG00000008255	si:ch211-275j6.5	94	71.812	ENSPREG00000021268	si:ch211-275j6.5	92	69.032	Poecilia_reticulata
ENSGACG00000008255	si:ch211-275j6.5	67	66.055	ENSPPYG00000005082	C12orf65	87	57.534	Pongo_abelii
ENSGACG00000008255	si:ch211-275j6.5	70	58.772	ENSPCAG00000016193	C12orf65	85	54.730	Procavia_capensis
ENSGACG00000008255	si:ch211-275j6.5	60	70.103	ENSPCOG00000021574	C12orf65	78	59.574	Propithecus_coquereli
ENSGACG00000008255	si:ch211-275j6.5	76	62.810	ENSPVAG00000015301	C12orf65	85	57.534	Pteropus_vampyrus
ENSGACG00000008255	si:ch211-275j6.5	89	82.979	ENSPNYG00000014456	si:ch211-275j6.5	87	82.979	Pundamilia_nyererei
ENSGACG00000008255	si:ch211-275j6.5	83	65.909	ENSPNAG00000019769	si:ch211-275j6.5	78	65.909	Pygocentrus_nattereri
ENSGACG00000008255	si:ch211-275j6.5	67	63.636	ENSRNOG00000001073	RGD1563482	78	57.241	Rattus_norvegicus
ENSGACG00000008255	si:ch211-275j6.5	67	65.138	ENSRBIG00000040789	C12orf65	87	56.849	Rhinopithecus_bieti
ENSGACG00000008255	si:ch211-275j6.5	67	64.220	ENSRROG00000031384	C12orf65	85	56.164	Rhinopithecus_roxellana
ENSGACG00000008255	si:ch211-275j6.5	67	66.972	ENSSBOG00000026629	C12orf65	85	59.589	Saimiri_boliviensis_boliviensis
ENSGACG00000008255	si:ch211-275j6.5	92	54.795	ENSSHAG00000014988	C12orf65	80	53.741	Sarcophilus_harrisii
ENSGACG00000008255	si:ch211-275j6.5	98	60.976	ENSSFOG00015019122	si:ch211-275j6.5	92	60.976	Scleropages_formosus
ENSGACG00000008255	si:ch211-275j6.5	100	75.472	ENSSMAG00000016770	si:ch211-275j6.5	94	75.472	Scophthalmus_maximus
ENSGACG00000008255	si:ch211-275j6.5	86	77.372	ENSSDUG00000020401	si:ch211-275j6.5	87	77.372	Seriola_dumerili
ENSGACG00000008255	si:ch211-275j6.5	100	73.750	ENSSLDG00000017638	si:ch211-275j6.5	94	73.750	Seriola_lalandi_dorsalis
ENSGACG00000008255	si:ch211-275j6.5	75	63.866	ENSSPUG00000012613	C12orf65	73	65.833	Sphenodon_punctatus
ENSGACG00000008255	si:ch211-275j6.5	99	75.159	ENSSPAG00000023476	si:ch211-275j6.5	93	75.159	Stegastes_partitus
ENSGACG00000008255	si:ch211-275j6.5	73	63.793	ENSSSCG00000009774	C12orf65	76	63.793	Sus_scrofa
ENSGACG00000008255	si:ch211-275j6.5	75	60.833	ENSTGUG00000005440	C12orf65	94	60.833	Taeniopygia_guttata
ENSGACG00000008255	si:ch211-275j6.5	100	74.843	ENSTNIG00000015832	si:ch211-275j6.5	94	74.843	Tetraodon_nigroviridis
ENSGACG00000008255	si:ch211-275j6.5	74	61.345	ENSTBEG00000012500	C12orf65	86	57.432	Tupaia_belangeri
ENSGACG00000008255	si:ch211-275j6.5	74	64.407	ENSTTRG00000015880	C12orf65	76	62.992	Tursiops_truncatus
ENSGACG00000008255	si:ch211-275j6.5	68	65.138	ENSUAMG00000019669	C12orf65	82	60.145	Ursus_americanus
ENSGACG00000008255	si:ch211-275j6.5	68	65.138	ENSUMAG00000004025	C12orf65	82	60.145	Ursus_maritimus
ENSGACG00000008255	si:ch211-275j6.5	69	67.890	ENSVVUG00000027811	C12orf65	80	61.940	Vulpes_vulpes
ENSGACG00000008255	si:ch211-275j6.5	97	70.968	ENSXCOG00000000975	si:ch211-275j6.5	92	70.968	Xiphophorus_couchianus