EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000008351 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162730
Alias: fi61b04|wu:fi61b04
Full Name: zgc:162730
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 1011 bases
Position: chrgroupI:7086897-7087907
Accession: ZDB-GENE-030131-6366
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000011035	zf-CCCH	PF00642.24	1.3e-21	1	2
ENSGACP00000011035	zf-CCCH	PF00642.24	1.3e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000011058	-	939	-	ENSGACP00000011035	313 (aa)	-	G3P0B2

Gene Model

Click here to download ENSGACG00000008351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000008351's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000008351	zgc:162730	83	40.977	ENSGACG00000011271	zfp36l1a	66	40.977
ENSGACG00000008351	zgc:162730	100	34.743	ENSGACG00000013400	sb:cb81	80	40.418

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000008351	zgc:162730	99	73.607	ENSAPOG00000014920	zgc:162730	79	74.194	Acanthochromis_polyacanthus
ENSGACG00000008351	zgc:162730	61	41.791	ENSAPOG00000014912	zgc:114130	52	41.304	Acanthochromis_polyacanthus
ENSGACG00000008351	zgc:162730	83	39.273	ENSACIG00000016314	zfp36l1a	68	40.000	Amphilophus_citrinellus
ENSGACG00000008351	zgc:162730	73	71.053	ENSACIG00000017366	zgc:162730	97	69.737	Amphilophus_citrinellus
ENSGACG00000008351	zgc:162730	98	37.805	ENSACIG00000017364	zgc:114130	83	38.111	Amphilophus_citrinellus
ENSGACG00000008351	zgc:162730	99	74.780	ENSAOCG00000002001	zgc:162730	79	75.367	Amphiprion_ocellaris
ENSGACG00000008351	zgc:162730	100	38.390	ENSAOCG00000024158	sb:cb81	69	42.612	Amphiprion_ocellaris
ENSGACG00000008351	zgc:162730	61	43.069	ENSAOCG00000022227	zgc:114130	52	40.870	Amphiprion_ocellaris
ENSGACG00000008351	zgc:162730	99	74.487	ENSAPEG00000015490	zgc:162730	83	75.073	Amphiprion_percula
ENSGACG00000008351	zgc:162730	61	43.564	ENSAPEG00000015497	zgc:114130	52	41.304	Amphiprion_percula
ENSGACG00000008351	zgc:162730	100	37.461	ENSAPEG00000022405	sb:cb81	69	42.268	Amphiprion_percula
ENSGACG00000008351	zgc:162730	83	37.918	ENSATEG00000014086	zfp36l1b	62	37.918	Anabas_testudineus
ENSGACG00000008351	zgc:162730	99	72.807	ENSATEG00000008790	zgc:162730	80	73.977	Anabas_testudineus
ENSGACG00000008351	zgc:162730	61	43.689	ENSATEG00000008781	zgc:114130	62	42.500	Anabas_testudineus
ENSGACG00000008351	zgc:162730	82	39.636	ENSATEG00000003462	sb:cb81	69	39.617	Anabas_testudineus
ENSGACG00000008351	zgc:162730	82	38.225	ENSACLG00000013759	sb:cb81	61	42.034	Astatotilapia_calliptera
ENSGACG00000008351	zgc:162730	100	68.732	ENSACLG00000022112	zgc:162730	82	72.861	Astatotilapia_calliptera
ENSGACG00000008351	zgc:162730	82	40.134	ENSAMXG00000034874	sb:cb81	72	41.801	Astyanax_mexicanus
ENSGACG00000008351	zgc:162730	83	38.258	ENSAMXG00000036093	zfp36l1a	62	40.441	Astyanax_mexicanus
ENSGACG00000008351	zgc:162730	100	52.469	ENSAMXG00000035945	zgc:162730	80	54.908	Astyanax_mexicanus
ENSGACG00000008351	zgc:162730	100	36.827	ENSCSEG00000014426	sb:cb81	59	42.236	Cynoglossus_semilaevis
ENSGACG00000008351	zgc:162730	100	71.676	ENSCSEG00000018283	zgc:162730	95	71.556	Cynoglossus_semilaevis
ENSGACG00000008351	zgc:162730	53	44.693	ENSCVAG00000009207	sb:cb81	71	41.214	Cyprinodon_variegatus
ENSGACG00000008351	zgc:162730	99	69.436	ENSCVAG00000018571	zgc:162730	79	68.546	Cyprinodon_variegatus
ENSGACG00000008351	zgc:162730	100	50.470	ENSDARG00000103720	zgc:162730	77	56.842	Danio_rerio
ENSGACG00000008351	zgc:162730	83	38.868	ENSDARG00000016154	zfp36l1a	63	40.977	Danio_rerio
ENSGACG00000008351	zgc:162730	100	37.730	ENSDARG00000040503	sb:cb81	71	39.867	Danio_rerio
ENSGACG00000008351	zgc:162730	100	38.323	ENSELUG00000013045	sb:cb81	72	38.246	Esox_lucius
ENSGACG00000008351	zgc:162730	99	59.006	ENSELUG00000013158	zgc:162730	80	60.748	Esox_lucius
ENSGACG00000008351	zgc:162730	99	69.527	ENSFHEG00000013710	zgc:162730	79	68.639	Fundulus_heteroclitus
ENSGACG00000008351	zgc:162730	100	69.062	ENSGMOG00000017242	zgc:162730	100	72.188	Gadus_morhua
ENSGACG00000008351	zgc:162730	100	36.957	ENSGAFG00000015700	sb:cb81	69	42.333	Gambusia_affinis
ENSGACG00000008351	zgc:162730	99	71.598	ENSGAFG00000009953	zgc:162730	79	70.710	Gambusia_affinis
ENSGACG00000008351	zgc:162730	82	38.603	ENSGAGG00000007315	ZFP36L1	68	38.806	Gopherus_agassizii
ENSGACG00000008351	zgc:162730	100	68.732	ENSHBUG00000015057	zgc:162730	82	73.156	Haplochromis_burtoni
ENSGACG00000008351	zgc:162730	81	38.014	ENSHBUG00000002383	sb:cb81	61	42.034	Haplochromis_burtoni
ENSGACG00000008351	zgc:162730	71	35.268	ENSHCOG00000012747	zfp36l1b	91	35.268	Hippocampus_comes
ENSGACG00000008351	zgc:162730	82	35.235	ENSHCOG00000000792	sb:cb81	64	36.667	Hippocampus_comes
ENSGACG00000008351	zgc:162730	98	72.271	ENSHCOG00000015801	zgc:162730	75	71.605	Hippocampus_comes
ENSGACG00000008351	zgc:162730	83	39.924	ENSIPUG00000023681	ZFP36L1	62	41.288	Ictalurus_punctatus
ENSGACG00000008351	zgc:162730	82	58.242	ENSIPUG00000018248	zgc:162730	74	57.095	Ictalurus_punctatus
ENSGACG00000008351	zgc:162730	100	40.952	ENSIPUG00000011378	sb:cb81	66	44.964	Ictalurus_punctatus
ENSGACG00000008351	zgc:162730	100	68.129	ENSKMAG00000019277	zgc:162730	79	67.544	Kryptolebias_marmoratus
ENSGACG00000008351	zgc:162730	83	41.418	ENSKMAG00000013156	zfp36l1a	62	41.418	Kryptolebias_marmoratus
ENSGACG00000008351	zgc:162730	100	74.854	ENSLBEG00000018380	zgc:162730	79	74.561	Labrus_bergylta
ENSGACG00000008351	zgc:162730	100	38.806	ENSLACG00000015732	sb:cb81	68	41.237	Latimeria_chalumnae
ENSGACG00000008351	zgc:162730	99	39.441	ENSLACG00000015980	-	76	42.561	Latimeria_chalumnae
ENSGACG00000008351	zgc:162730	99	53.963	ENSLOCG00000014597	zgc:162730	72	58.305	Lepisosteus_oculatus
ENSGACG00000008351	zgc:162730	83	39.394	ENSLOCG00000013957	zfp36l1a	62	37.906	Lepisosteus_oculatus
ENSGACG00000008351	zgc:162730	100	42.900	ENSLOCG00000014587	sb:cb81	76	43.939	Lepisosteus_oculatus
ENSGACG00000008351	zgc:162730	100	69.118	ENSMAMG00000007516	zgc:162730	78	71.930	Mastacembelus_armatus
ENSGACG00000008351	zgc:162730	82	38.014	ENSMZEG00005024684	sb:cb81	61	40.816	Maylandia_zebra
ENSGACG00000008351	zgc:162730	82	37.671	ENSMZEG00005016001	-	69	40.061	Maylandia_zebra
ENSGACG00000008351	zgc:162730	100	70.570	ENSMZEG00005014415	zgc:162730	97	71.053	Maylandia_zebra
ENSGACG00000008351	zgc:162730	82	38.783	ENSMMOG00000010073	sb:cb81	66	44.487	Mola_mola
ENSGACG00000008351	zgc:162730	74	80.687	ENSMMOG00000011506	zgc:162730	99	81.116	Mola_mola
ENSGACG00000008351	zgc:162730	99	71.053	ENSMALG00000002348	zgc:162730	79	71.345	Monopterus_albus
ENSGACG00000008351	zgc:162730	82	37.671	ENSNBRG00000006231	sb:cb81	64	41.156	Neolamprologus_brichardi
ENSGACG00000008351	zgc:162730	100	68.732	ENSNBRG00000013701	zgc:162730	82	72.861	Neolamprologus_brichardi
ENSGACG00000008351	zgc:162730	82	38.144	ENSONIG00000001259	sb:cb81	60	42.321	Oreochromis_niloticus
ENSGACG00000008351	zgc:162730	59	42.935	ENSONIG00000005004	zgc:114130	57	41.709	Oreochromis_niloticus
ENSGACG00000008351	zgc:162730	86	70.144	ENSONIG00000005003	zgc:162730	95	69.159	Oreochromis_niloticus
ENSGACG00000008351	zgc:162730	53	46.667	ENSORLG00000024026	sb:cb81	61	40.461	Oryzias_latipes
ENSGACG00000008351	zgc:162730	99	59.760	ENSORLG00000027149	zgc:162730	79	62.575	Oryzias_latipes
ENSGACG00000008351	zgc:162730	99	59.760	ENSORLG00020020289	zgc:162730	79	62.575	Oryzias_latipes_hni
ENSGACG00000008351	zgc:162730	99	60.180	ENSORLG00015001519	zgc:162730	79	62.687	Oryzias_latipes_hsok
ENSGACG00000008351	zgc:162730	100	37.309	ENSORLG00015010105	sb:cb81	71	40.728	Oryzias_latipes_hsok
ENSGACG00000008351	zgc:162730	53	46.667	ENSOMEG00000020565	sb:cb81	70	43.643	Oryzias_melastigma
ENSGACG00000008351	zgc:162730	99	62.952	ENSOMEG00000017752	zgc:162730	79	63.855	Oryzias_melastigma
ENSGACG00000008351	zgc:162730	53	64.327	ENSPMGG00000011911	zgc:162730	63	73.600	Periophthalmus_magnuspinnatus
ENSGACG00000008351	zgc:162730	83	41.353	ENSPMGG00000000442	zfp36l1a	68	41.353	Periophthalmus_magnuspinnatus
ENSGACG00000008351	zgc:162730	81	38.931	ENSPMGG00000009232	sb:cb81	64	40.179	Periophthalmus_magnuspinnatus
ENSGACG00000008351	zgc:162730	100	36.364	ENSPFOG00000013806	sb:cb81	69	41.806	Poecilia_formosa
ENSGACG00000008351	zgc:162730	99	74.455	ENSPFOG00000003665	zgc:162730	95	73.520	Poecilia_formosa
ENSGACG00000008351	zgc:162730	99	71.302	ENSPLAG00000000946	zgc:162730	79	69.822	Poecilia_latipinna
ENSGACG00000008351	zgc:162730	100	35.913	ENSPLAG00000020158	sb:cb81	75	42.282	Poecilia_latipinna
ENSGACG00000008351	zgc:162730	100	36.364	ENSPMEG00000022425	sb:cb81	69	41.806	Poecilia_mexicana
ENSGACG00000008351	zgc:162730	99	71.302	ENSPMEG00000000341	zgc:162730	79	70.414	Poecilia_mexicana
ENSGACG00000008351	zgc:162730	99	70.414	ENSPREG00000021263	zgc:162730	79	69.527	Poecilia_reticulata
ENSGACG00000008351	zgc:162730	100	36.061	ENSPREG00000017495	sb:cb81	69	41.860	Poecilia_reticulata
ENSGACG00000008351	zgc:162730	100	68.732	ENSPNYG00000015553	zgc:162730	82	72.861	Pundamilia_nyererei
ENSGACG00000008351	zgc:162730	82	37.884	ENSPNYG00000007502	sb:cb81	69	40.317	Pundamilia_nyererei
ENSGACG00000008351	zgc:162730	82	44.906	ENSPNAG00000030063	sb:cb81	68	43.299	Pygocentrus_nattereri
ENSGACG00000008351	zgc:162730	100	50.794	ENSPNAG00000023018	zgc:162730	74	57.193	Pygocentrus_nattereri
ENSGACG00000008351	zgc:162730	100	35.714	ENSSFOG00015003179	sb:cb81	65	35.915	Scleropages_formosus
ENSGACG00000008351	zgc:162730	59	42.021	ENSSMAG00000018208	-	50	42.021	Scophthalmus_maximus
ENSGACG00000008351	zgc:162730	100	74.344	ENSSMAG00000018612	zgc:162730	79	74.636	Scophthalmus_maximus
ENSGACG00000008351	zgc:162730	100	36.812	ENSSDUG00000004426	sb:cb81	68	42.271	Seriola_dumerili
ENSGACG00000008351	zgc:162730	100	77.287	ENSSDUG00000002247	zgc:162730	77	77.603	Seriola_dumerili
ENSGACG00000008351	zgc:162730	83	39.179	ENSSDUG00000001019	zfp36l1b	65	38.214	Seriola_dumerili
ENSGACG00000008351	zgc:162730	83	38.433	ENSSLDG00000011048	zfp36l1b	65	37.500	Seriola_lalandi_dorsalis
ENSGACG00000008351	zgc:162730	100	76.972	ENSSLDG00000008502	zgc:162730	77	77.287	Seriola_lalandi_dorsalis
ENSGACG00000008351	zgc:162730	100	36.812	ENSSLDG00000018035	sb:cb81	69	42.271	Seriola_lalandi_dorsalis
ENSGACG00000008351	zgc:162730	82	40.602	ENSSPAG00000013546	sb:cb81	71	43.813	Stegastes_partitus
ENSGACG00000008351	zgc:162730	99	75.953	ENSSPAG00000006851	zgc:162730	79	76.246	Stegastes_partitus
ENSGACG00000008351	zgc:162730	100	34.154	ENSTRUG00000020720	sb:cb81	62	38.202	Takifugu_rubripes
ENSGACG00000008351	zgc:162730	81	38.603	ENSTRUG00000022473	zgc:114130	62	39.416	Takifugu_rubripes
ENSGACG00000008351	zgc:162730	100	71.261	ENSTRUG00000021229	zgc:162730	79	71.554	Takifugu_rubripes
ENSGACG00000008351	zgc:162730	100	37.654	ENSTNIG00000019802	sb:cb81	84	42.657	Tetraodon_nigroviridis
ENSGACG00000008351	zgc:162730	85	68.881	ENSTNIG00000000183	zgc:162730	81	68.263	Tetraodon_nigroviridis
ENSGACG00000008351	zgc:162730	83	39.068	ENSXETG00000016987	zfp36l1	68	38.790	Xenopus_tropicalis
ENSGACG00000008351	zgc:162730	77	33.065	ENSXCOG00000010688	sb:cb81	86	39.200	Xiphophorus_couchianus
ENSGACG00000008351	zgc:162730	99	72.024	ENSXCOG00000012791	zgc:162730	79	71.131	Xiphophorus_couchianus
ENSGACG00000008351	zgc:162730	99	72.619	ENSXMAG00000018206	zgc:162730	79	71.726	Xiphophorus_maculatus
ENSGACG00000008351	zgc:162730	100	35.737	ENSXMAG00000004681	sb:cb81	69	43.493	Xiphophorus_maculatus