EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSGACG00000008418 (Gene tree)
Gene ID
-
Gene Symbol
cpsf2
Alias
zgc:92484
Full Name
cleavage and polyadenylation specific factor 2
Gene Type
protein_coding
Species
Gasterosteus_aculeatus
Status
putative
Strand
Plus strand
Length
5427 bases
Position
chrgroupXVIII:7655321-7660747
Accession
ZDB-GENE-040718-79
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGACP00000011136Beta-CaspPF10996.81.9e-2111
ENSGACP00000011130Beta-CaspPF10996.82.6e-2111
ENSGACP00000011130Lactamase_BPF00753.274e-0511
ENSGACP00000011136RMMBLPF07521.125.7e-1311
ENSGACP00000011130RMMBLPF07521.128e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGACT00000011159-2378-ENSGACP00000011136634 (aa)-G3P0L3
ENSGACT00000011153-2364-ENSGACP00000011130787 (aa)-G3P0K7
Gene Model
Click here to download ENSGACG00000008418's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000008418's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGACG00000008418cpsf210084.537ENSG00000165934CPSF210087.500Homo_sapiens
ENSGACG00000008418cpsf210095.807ENSAPOG00000001242cpsf210095.807Acanthochromis_polyacanthus
ENSGACG00000008418cpsf25479.539ENSAMEG00000013790-10079.539Ailuropoda_melanoleuca
ENSGACG00000008418cpsf210094.924ENSACIG00000009331cpsf210094.924Amphilophus_citrinellus
ENSGACG00000008418cpsf210095.807ENSAOCG00000014095cpsf210095.807Amphiprion_ocellaris
ENSGACG00000008418cpsf210095.807ENSAPEG00000009158cpsf210095.807Amphiprion_percula
ENSGACG00000008418cpsf29694.987ENSATEG00000017644cpsf29994.128Anabas_testudineus
ENSGACG00000008418cpsf210084.684ENSAPLG00000006330CPSF210084.684Anas_platyrhynchos
ENSGACG00000008418cpsf210084.284ENSACAG00000009245CPSF210084.284Anolis_carolinensis
ENSGACG00000008418cpsf210084.664ENSANAG00000022915CPSF210084.664Aotus_nancymaae
ENSGACG00000008418cpsf210088.973ENSAMXG00000018696cpsf210088.973Astyanax_mexicanus
ENSGACG00000008418cpsf210084.664ENSBTAG00000010227CPSF210084.664Bos_taurus
ENSGACG00000008418cpsf210042.019WBGene00017313cpsf-210042.249Caenorhabditis_elegans
ENSGACG00000008418cpsf210084.664ENSCJAG00000018069CPSF210084.664Callithrix_jacchus
ENSGACG00000008418cpsf210084.537ENSCAFG00000010909CPSF210084.537Canis_familiaris
ENSGACG00000008418cpsf210084.537ENSCAFG00020020670CPSF210084.537Canis_lupus_dingo
ENSGACG00000008418cpsf210084.664ENSCHIG00000023848CPSF210084.664Capra_hircus
ENSGACG00000008418cpsf210084.664ENSTSYG00000009036CPSF210084.664Carlito_syrichta
ENSGACG00000008418cpsf25479.539ENSCAPG00000004833-10079.539Cavia_aperea
ENSGACG00000008418cpsf210084.664ENSCPOG00000010899CPSF210084.664Cavia_porcellus
ENSGACG00000008418cpsf210084.664ENSCCAG00000028088CPSF210084.664Cebus_capucinus
ENSGACG00000008418cpsf210084.664ENSCATG00000030132CPSF210084.664Cercocebus_atys
ENSGACG00000008418cpsf210084.664ENSCLAG00000012404CPSF210084.664Chinchilla_lanigera
ENSGACG00000008418cpsf210084.664ENSCSAG00000011300CPSF210084.664Chlorocebus_sabaeus
ENSGACG00000008418cpsf210079.341ENSCHOG00000012904CPSF210079.341Choloepus_hoffmanni
ENSGACG00000008418cpsf210085.171ENSCPBG00000008766CPSF29785.171Chrysemys_picta_bellii
ENSGACG00000008418cpsf210053.416ENSCING00000007881-10052.664Ciona_intestinalis
ENSGACG00000008418cpsf210083.333ENSCANG00000041651CPSF210084.574Colobus_angolensis_palliatus
ENSGACG00000008418cpsf210084.157ENSCGRG00001006901Cpsf210084.157Cricetulus_griseus_chok1gshd
ENSGACG00000008418cpsf210084.157ENSCGRG00000012416Cpsf210084.157Cricetulus_griseus_crigri
ENSGACG00000008418cpsf210093.147ENSCSEG00000004116cpsf210093.147Cynoglossus_semilaevis
ENSGACG00000008418cpsf210094.536ENSCVAG00000000095cpsf210094.536Cyprinodon_variegatus
ENSGACG00000008418cpsf210087.975ENSDARG00000028971cpsf210087.975Danio_rerio
ENSGACG00000008418cpsf210084.664ENSDNOG00000042757CPSF210084.664Dasypus_novemcinctus
ENSGACG00000008418cpsf210084.664ENSDORG00000013709Cpsf210084.664Dipodomys_ordii
ENSGACG00000008418cpsf210053.646FBgn0027873Cpsf10010053.532Drosophila_melanogaster
ENSGACG00000008418cpsf210077.089ENSETEG00000012123CPSF210077.089Echinops_telfairi
ENSGACG00000008418cpsf26576.528ENSEBUG00000012098cpsf29376.528Eptatretus_burgeri
ENSGACG00000008418cpsf28990.102ENSEASG00005021193CPSF210090.102Equus_asinus_asinus
ENSGACG00000008418cpsf210084.537ENSECAG00000023935CPSF210084.537Equus_caballus
ENSGACG00000008418cpsf210089.573ENSELUG00000008442cpsf210089.573Esox_lucius
ENSGACG00000008418cpsf210084.537ENSFCAG00000007886CPSF210084.537Felis_catus
ENSGACG00000008418cpsf210085.025ENSFALG00000002412CPSF210085.025Ficedula_albicollis
ENSGACG00000008418cpsf210084.537ENSFDAG00000006327CPSF210084.537Fukomys_damarensis
ENSGACG00000008418cpsf29692.267ENSFHEG00000015465cpsf29893.054Fundulus_heteroclitus
ENSGACG00000008418cpsf210090.152ENSGMOG00000008761cpsf210090.152Gadus_morhua
ENSGACG00000008418cpsf210085.152ENSGALG00000010783CPSF210085.152Gallus_gallus
ENSGACG00000008418cpsf210094.663ENSGAFG00000001407cpsf210094.663Gambusia_affinis
ENSGACG00000008418cpsf210085.044ENSGAGG00000008287CPSF210085.044Gopherus_agassizii
ENSGACG00000008418cpsf210084.537ENSGGOG00000011799CPSF210084.537Gorilla_gorilla
ENSGACG00000008418cpsf210094.536ENSHBUG00000023466cpsf210094.536Haplochromis_burtoni
ENSGACG00000008418cpsf210084.664ENSHGLG00000018311CPSF210084.664Heterocephalus_glaber_female
ENSGACG00000008418cpsf210084.664ENSHGLG00100016460CPSF210084.664Heterocephalus_glaber_male
ENSGACG00000008418cpsf210093.520ENSHCOG00000019527cpsf29893.520Hippocampus_comes
ENSGACG00000008418cpsf210090.114ENSIPUG00000020857cpsf210090.114Ictalurus_punctatus
ENSGACG00000008418cpsf210084.664ENSSTOG00000009528CPSF210084.664Ictidomys_tridecemlineatus
ENSGACG00000008418cpsf210084.537ENSJJAG00000017925Cpsf210084.537Jaculus_jaculus
ENSGACG00000008418cpsf210094.663ENSKMAG00000019429cpsf210094.663Kryptolebias_marmoratus
ENSGACG00000008418cpsf210094.637ENSLBEG00000011585cpsf210095.308Labrus_bergylta
ENSGACG00000008418cpsf210083.503ENSLACG00000019024CPSF210083.904Latimeria_chalumnae
ENSGACG00000008418cpsf210088.608ENSLOCG00000014102cpsf210088.608Lepisosteus_oculatus
ENSGACG00000008418cpsf210084.324ENSLAFG00000004891CPSF210084.324Loxodonta_africana
ENSGACG00000008418cpsf210084.664ENSMFAG00000041212CPSF210084.664Macaca_fascicularis
ENSGACG00000008418cpsf210084.664ENSMMUG00000000699CPSF210084.664Macaca_mulatta
ENSGACG00000008418cpsf210084.664ENSMNEG00000031584CPSF210084.664Macaca_nemestrina
ENSGACG00000008418cpsf210084.664ENSMLEG00000029394CPSF210084.664Mandrillus_leucophaeus
ENSGACG00000008418cpsf210095.680ENSMAMG00000004235cpsf210095.680Mastacembelus_armatus
ENSGACG00000008418cpsf210094.663ENSMZEG00005001769cpsf210094.663Maylandia_zebra
ENSGACG00000008418cpsf210084.918ENSMGAG00000013122CPSF210084.918Meleagris_gallopavo
ENSGACG00000008418cpsf210084.157ENSMAUG00000015160Cpsf210084.157Mesocricetus_auratus
ENSGACG00000008418cpsf210084.664ENSMICG00000016441CPSF210084.664Microcebus_murinus
ENSGACG00000008418cpsf210084.157ENSMOCG00000015372Cpsf210084.157Microtus_ochrogaster
ENSGACG00000008418cpsf210089.962ENSMMOG00000015590cpsf210089.962Mola_mola
ENSGACG00000008418cpsf210084.664ENSMODG00000002042CPSF210084.664Monodelphis_domestica
ENSGACG00000008418cpsf210091.614ENSMALG00000022275cpsf210091.614Monopterus_albus
ENSGACG00000008418cpsf210084.157ENSMUSG00000041781Cpsf210084.157Mus_musculus
ENSGACG00000008418cpsf210084.284MGP_PahariEiJ_G0029791Cpsf210084.284Mus_pahari
ENSGACG00000008418cpsf210084.157MGP_SPRETEiJ_G0018877Cpsf210084.157Mus_spretus
ENSGACG00000008418cpsf210084.664ENSMPUG00000007617CPSF29884.664Mustela_putorius_furo
ENSGACG00000008418cpsf210084.411ENSMLUG00000005570CPSF210084.411Myotis_lucifugus
ENSGACG00000008418cpsf210084.411ENSNGAG00000020312Cpsf210084.411Nannospalax_galili
ENSGACG00000008418cpsf210094.536ENSNBRG00000022402cpsf210094.536Neolamprologus_brichardi
ENSGACG00000008418cpsf210083.777ENSNLEG00000017132CPSF210083.777Nomascus_leucogenys
ENSGACG00000008418cpsf28994.904ENSMEUG00000008138CPSF29192.880Notamacropus_eugenii
ENSGACG00000008418cpsf210078.425ENSOPRG00000008484-10080.488Ochotona_princeps
ENSGACG00000008418cpsf210084.411ENSODEG00000008682CPSF210084.411Octodon_degus
ENSGACG00000008418cpsf210094.282ENSONIG00000005901cpsf210094.282Oreochromis_niloticus
ENSGACG00000008418cpsf210084.664ENSOANG00000003822CPSF210084.664Ornithorhynchus_anatinus
ENSGACG00000008418cpsf210084.664ENSOCUG00000005713CPSF210084.664Oryctolagus_cuniculus
ENSGACG00000008418cpsf210092.902ENSORLG00000011628cpsf210088.056Oryzias_latipes
ENSGACG00000008418cpsf210093.901ENSORLG00020016980cpsf210093.901Oryzias_latipes_hni
ENSGACG00000008418cpsf210093.901ENSORLG00015011910cpsf210093.901Oryzias_latipes_hsok
ENSGACG00000008418cpsf210094.036ENSOMEG00000022876cpsf210094.036Oryzias_melastigma
ENSGACG00000008418cpsf25575.287ENSOGAG00000008605-10075.287Otolemur_garnettii
ENSGACG00000008418cpsf210081.669ENSOARG00000012889CPSF210081.669Ovis_aries
ENSGACG00000008418cpsf210084.537ENSPPAG00000039666CPSF210084.537Pan_paniscus
ENSGACG00000008418cpsf29984.518ENSPPRG00000010869CPSF210084.518Panthera_pardus
ENSGACG00000008418cpsf210084.537ENSPTIG00000021202CPSF210084.537Panthera_tigris_altaica
ENSGACG00000008418cpsf210084.537ENSPTRG00000006651CPSF210084.537Pan_troglodytes
ENSGACG00000008418cpsf210084.664ENSPANG00000017417CPSF210084.664Papio_anubis
ENSGACG00000008418cpsf210088.836ENSPKIG00000021453cpsf210084.537Paramormyrops_kingsleyae
ENSGACG00000008418cpsf210084.664ENSPSIG00000006289CPSF210084.664Pelodiscus_sinensis
ENSGACG00000008418cpsf29488.333ENSPMGG00000002511cpsf29988.333Periophthalmus_magnuspinnatus
ENSGACG00000008418cpsf210084.284ENSPEMG00000007917Cpsf210084.284Peromyscus_maniculatus_bairdii
ENSGACG00000008418cpsf210073.149ENSPMAG00000006205cpsf210073.283Petromyzon_marinus
ENSGACG00000008418cpsf210084.664ENSPCIG00000011393CPSF210084.664Phascolarctos_cinereus
ENSGACG00000008418cpsf210094.663ENSPFOG00000018648cpsf210094.663Poecilia_formosa
ENSGACG00000008418cpsf210094.663ENSPLAG00000019199cpsf29994.663Poecilia_latipinna
ENSGACG00000008418cpsf210093.533ENSPMEG00000012100cpsf210094.370Poecilia_mexicana
ENSGACG00000008418cpsf210094.536ENSPREG00000008960cpsf210094.536Poecilia_reticulata
ENSGACG00000008418cpsf27980.119ENSPPYG00000029685-10080.119Pongo_abelii
ENSGACG00000008418cpsf210084.537ENSPCAG00000012477CPSF210084.537Procavia_capensis
ENSGACG00000008418cpsf210084.664ENSPCOG00000026387CPSF210084.664Propithecus_coquereli
ENSGACG00000008418cpsf26490.816ENSPVAG00000004223CPSF26590.816Pteropus_vampyrus
ENSGACG00000008418cpsf210094.289ENSPNYG00000023356cpsf210094.289Pundamilia_nyererei
ENSGACG00000008418cpsf210090.368ENSPNAG00000001849cpsf210090.368Pygocentrus_nattereri
ENSGACG00000008418cpsf210084.157ENSRNOG00000005733Cpsf210084.157Rattus_norvegicus
ENSGACG00000008418cpsf210084.664ENSRBIG00000044792CPSF210084.664Rhinopithecus_bieti
ENSGACG00000008418cpsf210084.664ENSRROG00000034875CPSF210084.664Rhinopithecus_roxellana
ENSGACG00000008418cpsf210084.664ENSSBOG00000024571CPSF210084.664Saimiri_boliviensis_boliviensis
ENSGACG00000008418cpsf210084.664ENSSHAG00000010458CPSF210084.664Sarcophilus_harrisii
ENSGACG00000008418cpsf210091.128ENSSFOG00015002117cpsf210091.255Scleropages_formosus
ENSGACG00000008418cpsf210094.924ENSSMAG00000002001cpsf210095.685Scophthalmus_maximus
ENSGACG00000008418cpsf210096.061ENSSDUG00000004084cpsf210096.061Seriola_dumerili
ENSGACG00000008418cpsf210095.934ENSSLDG00000024330cpsf210095.934Seriola_lalandi_dorsalis
ENSGACG00000008418cpsf25993.069ENSSARG00000009784-6393.069Sorex_araneus
ENSGACG00000008418cpsf210084.664ENSSPUG00000013485CPSF210084.664Sphenodon_punctatus
ENSGACG00000008418cpsf210095.680ENSSPAG00000013284cpsf210095.680Stegastes_partitus
ENSGACG00000008418cpsf210084.537ENSSSCG00000002447CPSF210084.537Sus_scrofa
ENSGACG00000008418cpsf210084.898ENSTGUG00000012571-10084.898Taeniopygia_guttata
ENSGACG00000008418cpsf210094.155ENSTRUG00000003742cpsf210094.155Takifugu_rubripes
ENSGACG00000008418cpsf210092.395ENSTNIG00000012228cpsf210093.283Tetraodon_nigroviridis
ENSGACG00000008418cpsf29181.988ENSTBEG00000004530CPSF29481.988Tupaia_belangeri
ENSGACG00000008418cpsf210082.547ENSTTRG00000008697CPSF28887.500Tursiops_truncatus
ENSGACG00000008418cpsf210084.664ENSUAMG00000028071CPSF210084.664Ursus_americanus
ENSGACG00000008418cpsf210084.664ENSUMAG00000005029CPSF210084.664Ursus_maritimus
ENSGACG00000008418cpsf29984.518ENSVPAG00000003503CPSF210084.518Vicugna_pacos
ENSGACG00000008418cpsf210084.537ENSVVUG00000024642CPSF210084.537Vulpes_vulpes
ENSGACG00000008418cpsf210084.411ENSXETG00000010289cpsf210084.411Xenopus_tropicalis
ENSGACG00000008418cpsf210094.028ENSXCOG00000001764cpsf210094.028Xiphophorus_couchianus
ENSGACG00000008418cpsf210094.663ENSXMAG00000017048cpsf210094.663Xiphophorus_maculatus

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