EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000008447 (Gene tree)
Gene ID: -
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3592 bases
Position: chrgroupXVII:7929609-7933200
Accession: ZDB-GENE-091204-146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000011173	R3H	PF01424.22	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000011196	-	1272	-	ENSGACP00000011173	424 (aa)	-	G3P0Q0

Gene Model

Click here to download ENSGACG00000008447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000008447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000008447	r3hcc1	97	33.693	ENSG00000104679	R3HCC1	97	32.207	Homo_sapiens
ENSGACG00000008447	r3hcc1	94	54.878	ENSAPOG00000003616	r3hcc1	91	56.311	Acanthochromis_polyacanthus
ENSGACG00000008447	r3hcc1	96	34.325	ENSAMEG00000002963	R3HCC1	92	34.513	Ailuropoda_melanoleuca
ENSGACG00000008447	r3hcc1	95	52.252	ENSACIG00000017144	r3hcc1	99	55.491	Amphilophus_citrinellus
ENSGACG00000008447	r3hcc1	93	57.778	ENSAOCG00000003945	r3hcc1	98	58.968	Amphiprion_ocellaris
ENSGACG00000008447	r3hcc1	93	57.002	ENSAPEG00000003613	r3hcc1	98	58.722	Amphiprion_percula
ENSGACG00000008447	r3hcc1	89	63.010	ENSATEG00000023860	r3hcc1	97	63.384	Anabas_testudineus
ENSGACG00000008447	r3hcc1	96	35.491	ENSACAG00000016627	R3HCC1	96	36.161	Anolis_carolinensis
ENSGACG00000008447	r3hcc1	97	34.066	ENSANAG00000036169	R3HCC1	95	34.234	Aotus_nancymaae
ENSGACG00000008447	r3hcc1	96	33.718	ENSBTAG00000025830	R3HCC1	93	33.718	Bos_taurus
ENSGACG00000008447	r3hcc1	96	33.482	ENSCJAG00000020118	R3HCC1	96	32.847	Callithrix_jacchus
ENSGACG00000008447	r3hcc1	97	34.253	ENSCAFG00000009210	R3HCC1	93	34.253	Canis_familiaris
ENSGACG00000008447	r3hcc1	83	32.632	ENSCAFG00020012870	R3HCC1	87	32.011	Canis_lupus_dingo
ENSGACG00000008447	r3hcc1	95	32.273	ENSCHIG00000009107	R3HCC1	96	32.273	Capra_hircus
ENSGACG00000008447	r3hcc1	96	33.410	ENSTSYG00000000511	R3HCC1	75	33.186	Carlito_syrichta
ENSGACG00000008447	r3hcc1	57	40.367	ENSCAPG00000015813	R3HCC1	55	40.367	Cavia_aperea
ENSGACG00000008447	r3hcc1	67	46.154	ENSCPOG00000009696	R3HCC1	61	46.154	Cavia_porcellus
ENSGACG00000008447	r3hcc1	97	31.878	ENSCCAG00000037811	R3HCC1	96	32.512	Cebus_capucinus
ENSGACG00000008447	r3hcc1	99	33.481	ENSCATG00000032971	R3HCC1	96	34.300	Cercocebus_atys
ENSGACG00000008447	r3hcc1	96	34.318	ENSCLAG00000015556	R3HCC1	86	35.512	Chinchilla_lanigera
ENSGACG00000008447	r3hcc1	97	33.333	ENSCSAG00000016250	R3HCC1	89	32.880	Chlorocebus_sabaeus
ENSGACG00000008447	r3hcc1	75	43.919	ENSCHOG00000000396	R3HCC1	97	34.071	Choloepus_hoffmanni
ENSGACG00000008447	r3hcc1	99	32.675	ENSCANG00000029441	R3HCC1	96	32.598	Colobus_angolensis_palliatus
ENSGACG00000008447	r3hcc1	93	57.869	ENSCSEG00000005748	r3hcc1	97	57.869	Cynoglossus_semilaevis
ENSGACG00000008447	r3hcc1	81	51.811	ENSCVAG00000002640	r3hcc1	96	51.811	Cyprinodon_variegatus
ENSGACG00000008447	r3hcc1	95	42.344	ENSDARG00000099593	r3hcc1	98	42.344	Danio_rerio
ENSGACG00000008447	r3hcc1	96	33.487	ENSDNOG00000007168	R3HCC1	89	33.562	Dasypus_novemcinctus
ENSGACG00000008447	r3hcc1	74	43.452	ENSDORG00000026365	R3hcc1	97	33.974	Dipodomys_ordii
ENSGACG00000008447	r3hcc1	96	34.339	ENSEASG00005018782	R3HCC1	78	34.339	Equus_asinus_asinus
ENSGACG00000008447	r3hcc1	96	33.875	ENSECAG00000025013	R3HCC1	95	34.180	Equus_caballus
ENSGACG00000008447	r3hcc1	96	34.325	ENSEEUG00000011918	R3HCC1	94	34.325	Erinaceus_europaeus
ENSGACG00000008447	r3hcc1	90	47.202	ENSELUG00000023650	r3hcc1	98	47.202	Esox_lucius
ENSGACG00000008447	r3hcc1	97	34.954	ENSFCAG00000012395	R3HCC1	94	35.253	Felis_catus
ENSGACG00000008447	r3hcc1	73	37.888	ENSFALG00000001646	R3HCC1	55	36.774	Ficedula_albicollis
ENSGACG00000008447	r3hcc1	95	41.147	ENSGMOG00000017590	-	99	41.147	Gadus_morhua
ENSGACG00000008447	r3hcc1	96	58.034	ENSGAFG00000008747	-	91	58.245	Gambusia_affinis
ENSGACG00000008447	r3hcc1	82	42.723	ENSGAGG00000018009	R3HCC1	54	42.723	Gopherus_agassizii
ENSGACG00000008447	r3hcc1	97	31.778	ENSGGOG00000013817	R3HCC1	97	32.426	Gorilla_gorilla
ENSGACG00000008447	r3hcc1	68	75.000	ENSHBUG00000022250	-	85	75.000	Haplochromis_burtoni
ENSGACG00000008447	r3hcc1	96	32.802	ENSHGLG00000010517	R3HCC1	90	33.410	Heterocephalus_glaber_female
ENSGACG00000008447	r3hcc1	96	32.802	ENSHGLG00100006388	R3HCC1	90	33.410	Heterocephalus_glaber_male
ENSGACG00000008447	r3hcc1	96	54.412	ENSHCOG00000011745	r3hcc1	93	54.412	Hippocampus_comes
ENSGACG00000008447	r3hcc1	95	48.068	ENSIPUG00000024504	r3hcc1	86	48.309	Ictalurus_punctatus
ENSGACG00000008447	r3hcc1	70	47.682	ENSSTOG00000027130	R3HCC1	67	47.682	Ictidomys_tridecemlineatus
ENSGACG00000008447	r3hcc1	95	31.064	ENSJJAG00000013075	R3hcc1	97	33.478	Jaculus_jaculus
ENSGACG00000008447	r3hcc1	90	55.949	ENSKMAG00000000286	r3hcc1	98	56.743	Kryptolebias_marmoratus
ENSGACG00000008447	r3hcc1	95	37.104	ENSLACG00000011894	R3HCC1	97	37.104	Latimeria_chalumnae
ENSGACG00000008447	r3hcc1	96	42.105	ENSLOCG00000015442	r3hcc1	98	42.680	Lepisosteus_oculatus
ENSGACG00000008447	r3hcc1	74	46.853	ENSLAFG00000016137	R3HCC1	62	46.853	Loxodonta_africana
ENSGACG00000008447	r3hcc1	97	33.333	ENSMFAG00000032894	R3HCC1	96	34.300	Macaca_fascicularis
ENSGACG00000008447	r3hcc1	97	33.867	ENSMMUG00000016655	R3HCC1	96	33.953	Macaca_mulatta
ENSGACG00000008447	r3hcc1	96	32.715	ENSMNEG00000043283	R3HCC1	96	34.069	Macaca_nemestrina
ENSGACG00000008447	r3hcc1	97	32.727	ENSMLEG00000030147	R3HCC1	96	34.300	Mandrillus_leucophaeus
ENSGACG00000008447	r3hcc1	90	61.869	ENSMAMG00000018146	r3hcc1	98	62.626	Mastacembelus_armatus
ENSGACG00000008447	r3hcc1	99	33.482	ENSMGAG00000001356	R3HCC1	92	33.482	Meleagris_gallopavo
ENSGACG00000008447	r3hcc1	98	33.190	ENSMICG00000011146	R3HCC1	96	32.715	Microcebus_murinus
ENSGACG00000008447	r3hcc1	69	44.898	ENSMOCG00000018508	R3hcc1	97	32.636	Microtus_ochrogaster
ENSGACG00000008447	r3hcc1	90	57.683	ENSMALG00000000731	r3hcc1	98	58.438	Monopterus_albus
ENSGACG00000008447	r3hcc1	68	44.218	MGP_CAROLIEiJ_G0019467	R3hcc1	97	32.143	Mus_caroli
ENSGACG00000008447	r3hcc1	69	44.000	ENSMUSG00000034194	R3hcc1	97	32.563	Mus_musculus
ENSGACG00000008447	r3hcc1	69	44.000	MGP_PahariEiJ_G0030484	R3hcc1	62	43.636	Mus_pahari
ENSGACG00000008447	r3hcc1	69	44.000	MGP_SPRETEiJ_G0020359	R3hcc1	62	43.210	Mus_spretus
ENSGACG00000008447	r3hcc1	96	32.947	ENSMPUG00000003457	R3HCC1	88	33.259	Mustela_putorius_furo
ENSGACG00000008447	r3hcc1	81	92.593	ENSNBRG00000016975	-	82	92.593	Neolamprologus_brichardi
ENSGACG00000008447	r3hcc1	89	31.695	ENSNLEG00000015944	R3HCC1	88	31.905	Nomascus_leucogenys
ENSGACG00000008447	r3hcc1	96	34.240	ENSMEUG00000010587	R3HCC1	97	34.240	Notamacropus_eugenii
ENSGACG00000008447	r3hcc1	97	33.937	ENSOPRG00000013390	R3HCC1	93	34.169	Ochotona_princeps
ENSGACG00000008447	r3hcc1	69	46.000	ENSODEG00000007529	R3HCC1	65	43.902	Octodon_degus
ENSGACG00000008447	r3hcc1	97	32.870	ENSOCUG00000023554	R3HCC1	86	34.554	Oryctolagus_cuniculus
ENSGACG00000008447	r3hcc1	90	51.688	ENSORLG00000016816	r3hcc1	97	51.948	Oryzias_latipes
ENSGACG00000008447	r3hcc1	90	51.688	ENSORLG00020012005	r3hcc1	97	51.688	Oryzias_latipes_hni
ENSGACG00000008447	r3hcc1	90	50.886	ENSORLG00015007018	r3hcc1	97	51.688	Oryzias_latipes_hsok
ENSGACG00000008447	r3hcc1	90	50.388	ENSOMEG00000000816	r3hcc1	97	50.646	Oryzias_melastigma
ENSGACG00000008447	r3hcc1	97	33.638	ENSOARG00000010146	R3HCC1	95	33.638	Ovis_aries
ENSGACG00000008447	r3hcc1	97	32.889	ENSPPAG00000033165	R3HCC1	97	32.658	Pan_paniscus
ENSGACG00000008447	r3hcc1	95	34.742	ENSPPRG00000002522	R3HCC1	97	35.047	Panthera_pardus
ENSGACG00000008447	r3hcc1	86	35.052	ENSPTIG00000011230	R3HCC1	92	35.385	Panthera_tigris_altaica
ENSGACG00000008447	r3hcc1	97	32.889	ENSPTRG00000020076	R3HCC1	96	32.471	Pan_troglodytes
ENSGACG00000008447	r3hcc1	97	33.103	ENSPANG00000000453	R3HCC1	96	34.135	Papio_anubis
ENSGACG00000008447	r3hcc1	87	47.135	ENSPKIG00000020397	-	94	47.135	Paramormyrops_kingsleyae
ENSGACG00000008447	r3hcc1	87	46.400	ENSPKIG00000014426	-	94	46.400	Paramormyrops_kingsleyae
ENSGACG00000008447	r3hcc1	96	35.455	ENSPSIG00000017664	R3HCC1	96	35.909	Pelodiscus_sinensis
ENSGACG00000008447	r3hcc1	54	63.529	ENSPMGG00000007792	r3hcc1	98	35.616	Periophthalmus_magnuspinnatus
ENSGACG00000008447	r3hcc1	95	32.120	ENSPEMG00000007118	R3hcc1	97	32.120	Peromyscus_maniculatus_bairdii
ENSGACG00000008447	r3hcc1	87	31.961	ENSPCIG00000022718	-	82	30.941	Phascolarctos_cinereus
ENSGACG00000008447	r3hcc1	96	56.490	ENSPFOG00000022301	r3hcc1	91	56.490	Poecilia_formosa
ENSGACG00000008447	r3hcc1	96	56.490	ENSPLAG00000010794	r3hcc1	91	56.490	Poecilia_latipinna
ENSGACG00000008447	r3hcc1	96	56.490	ENSPMEG00000022515	r3hcc1	91	56.490	Poecilia_mexicana
ENSGACG00000008447	r3hcc1	96	56.010	ENSPREG00000000713	r3hcc1	91	56.250	Poecilia_reticulata
ENSGACG00000008447	r3hcc1	86	32.836	ENSPPYG00000018436	R3HCC1	96	32.836	Pongo_abelii
ENSGACG00000008447	r3hcc1	73	46.479	ENSPCAG00000012229	R3HCC1	66	46.479	Procavia_capensis
ENSGACG00000008447	r3hcc1	95	34.174	ENSPCOG00000027554	R3HCC1	97	34.404	Propithecus_coquereli
ENSGACG00000008447	r3hcc1	97	35.780	ENSPVAG00000009829	R3HCC1	94	35.780	Pteropus_vampyrus
ENSGACG00000008447	r3hcc1	92	45.707	ENSPNAG00000023875	r3hcc1	99	45.567	Pygocentrus_nattereri
ENSGACG00000008447	r3hcc1	71	43.827	ENSRNOG00000016777	AABR07018321.1	83	32.661	Rattus_norvegicus
ENSGACG00000008447	r3hcc1	95	33.103	ENSRBIG00000028045	R3HCC1	97	32.500	Rhinopithecus_bieti
ENSGACG00000008447	r3hcc1	99	33.479	ENSRROG00000031126	R3HCC1	96	32.843	Rhinopithecus_roxellana
ENSGACG00000008447	r3hcc1	95	32.867	ENSSBOG00000022590	R3HCC1	97	33.566	Saimiri_boliviensis_boliviensis
ENSGACG00000008447	r3hcc1	50	50.588	ENSSHAG00000016526	-	97	32.489	Sarcophilus_harrisii
ENSGACG00000008447	r3hcc1	88	47.532	ENSSFOG00015013507	r3hcc1	96	47.532	Scleropages_formosus
ENSGACG00000008447	r3hcc1	90	65.075	ENSSMAG00000008647	r3hcc1	98	65.075	Scophthalmus_maximus
ENSGACG00000008447	r3hcc1	95	67.696	ENSSDUG00000022786	r3hcc1	98	68.794	Seriola_dumerili
ENSGACG00000008447	r3hcc1	96	66.667	ENSSLDG00000019031	r3hcc1	98	68.322	Seriola_lalandi_dorsalis
ENSGACG00000008447	r3hcc1	93	58.231	ENSSPAG00000013497	r3hcc1	98	58.231	Stegastes_partitus
ENSGACG00000008447	r3hcc1	100	33.626	ENSSSCG00000039915	-	94	34.725	Sus_scrofa
ENSGACG00000008447	r3hcc1	100	31.096	ENSSSCG00000037347	-	94	30.544	Sus_scrofa
ENSGACG00000008447	r3hcc1	93	52.130	ENSTRUG00000015880	r3hcc1	97	52.130	Takifugu_rubripes
ENSGACG00000008447	r3hcc1	97	32.391	ENSTTRG00000012247	R3HCC1	97	33.333	Tursiops_truncatus
ENSGACG00000008447	r3hcc1	95	33.718	ENSUAMG00000007344	R3HCC1	96	33.718	Ursus_americanus
ENSGACG00000008447	r3hcc1	97	34.253	ENSVVUG00000005056	R3HCC1	93	34.862	Vulpes_vulpes
ENSGACG00000008447	r3hcc1	87	55.026	ENSXCOG00000017626	r3hcc1	84	55.291	Xiphophorus_couchianus
ENSGACG00000008447	r3hcc1	96	57.554	ENSXMAG00000018375	r3hcc1	91	58.245	Xiphophorus_maculatus