EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000008616 (Gene tree)
Gene ID: -
Gene Symbol: sar1ab
Alias: fd13d02|sar1a|wu:fd13d02|zgc:110650
Full Name: secretion associated%2C Ras related GTPase 1Ab
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 2717 bases
Position: chrgroupVI:9849054-9851770
Accession: ZDB-GENE-050417-437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000011404	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSGACP00000011380	MMR_HSR1	PF01926.23	1.2e-05	1	1
ENSGACP00000011390	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000011403	-	842	-	ENSGACP00000011380	198 (aa)	-	G3P1B7
ENSGACT00000011427	-	570	-	ENSGACP00000011404	189 (aa)	-	G3P1D1
ENSGACT00000011413	-	848	-	ENSGACP00000011390	198 (aa)	-	G3P1B7

Gene Model

Click here to download ENSGACG00000008616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000008616's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000008616	sar1ab	94	30.337	ENSGACG00000003831	-	92	30.337
ENSGACG00000008616	sar1ab	100	82.828	ENSGACG00000002365	-	100	82.828
ENSGACG00000008616	sar1ab	97	30.270	ENSGACG00000019098	arl1	95	30.270
ENSGACG00000008616	sar1ab	94	31.111	ENSGACG00000014195	-	92	31.551
ENSGACG00000008616	sar1ab	67	36.364	ENSGACG00000000500	-	68	36.364
ENSGACG00000008616	sar1ab	88	30.723	ENSGACG00000003070	arl3	83	30.723
ENSGACG00000008616	sar1ab	73	33.571	ENSGACG00000013840	arl14	76	34.783
ENSGACG00000008616	sar1ab	94	30.645	ENSGACG00000018033	arl3l2	93	30.645
ENSGACG00000008616	sar1ab	76	33.333	ENSGACG00000009120	-	79	33.333
ENSGACG00000008616	sar1ab	90	33.333	ENSGACG00000010096	-	94	33.333
ENSGACG00000008616	sar1ab	72	33.099	ENSGACG00000019812	arl2	77	33.099
ENSGACG00000008616	sar1ab	72	32.168	ENSGACG00000017437	-	79	32.168
ENSGACG00000008616	sar1ab	76	33.333	ENSGACG00000000746	arf3b	79	33.333
ENSGACG00000008616	sar1ab	87	30.058	ENSGACG00000000686	arf5	89	30.058
ENSGACG00000008616	sar1ab	90	30.994	ENSGACG00000016756	-	90	30.286
ENSGACG00000008616	sar1ab	71	33.088	ENSGACG00000011972	arl8bb	77	33.594
ENSGACG00000008616	sar1ab	67	34.848	ENSGACG00000000497	-	66	34.848
ENSGACG00000008616	sar1ab	67	32.812	ENSGACG00000012267	arl8ba	69	32.812
ENSGACG00000008616	sar1ab	73	34.965	ENSGACG00000008143	arl4cb	75	34.228
ENSGACG00000008616	sar1ab	71	35.000	ENSGACG00000003710	arl4d	71	35.000
ENSGACG00000008616	sar1ab	87	30.286	ENSGACG00000012500	-	89	30.286
ENSGACG00000008616	sar1ab	100	84.343	ENSGACG00000001474	sar1b	100	84.343
ENSGACG00000008616	sar1ab	63	37.097	ENSGACG00000012810	arl4aa	62	37.398
ENSGACG00000008616	sar1ab	94	31.868	ENSGACG00000006779	-	92	32.240

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000008616	sar1ab	100	89.899	ENSACIG00000019827	sar1ab	100	89.899	Amphilophus_citrinellus
ENSGACG00000008616	sar1ab	100	90.909	ENSAOCG00000022062	sar1ab	100	90.909	Amphiprion_ocellaris
ENSGACG00000008616	sar1ab	100	90.909	ENSAPEG00000011525	sar1ab	100	90.909	Amphiprion_percula
ENSGACG00000008616	sar1ab	100	94.949	ENSATEG00000003466	sar1ab	100	94.949	Anabas_testudineus
ENSGACG00000008616	sar1ab	100	87.374	ENSACLG00000013053	sar1ab	100	87.374	Astatotilapia_calliptera
ENSGACG00000008616	sar1ab	100	93.434	ENSCSEG00000004825	sar1ab	100	93.434	Cynoglossus_semilaevis
ENSGACG00000008616	sar1ab	100	90.404	ENSCVAG00000015162	sar1ab	100	90.404	Cyprinodon_variegatus
ENSGACG00000008616	sar1ab	100	81.313	ENSCVAG00000006500	-	100	81.313	Cyprinodon_variegatus
ENSGACG00000008616	sar1ab	100	90.404	ENSDARG00000033320	sar1ab	100	90.404	Danio_rerio
ENSGACG00000008616	sar1ab	100	92.424	ENSELUG00000024279	sar1ab	100	92.424	Esox_lucius
ENSGACG00000008616	sar1ab	100	84.848	ENSELUG00000013652	sar1a	100	84.848	Esox_lucius
ENSGACG00000008616	sar1ab	100	81.818	ENSFHEG00000012352	-	100	81.818	Fundulus_heteroclitus
ENSGACG00000008616	sar1ab	100	89.394	ENSFHEG00000021773	sar1ab	100	89.394	Fundulus_heteroclitus
ENSGACG00000008616	sar1ab	100	90.909	ENSGMOG00000012588	sar1ab	100	90.909	Gadus_morhua
ENSGACG00000008616	sar1ab	100	92.424	ENSGAFG00000009702	sar1ab	100	92.424	Gambusia_affinis
ENSGACG00000008616	sar1ab	100	81.818	ENSGAFG00000004846	-	100	81.818	Gambusia_affinis
ENSGACG00000008616	sar1ab	100	87.374	ENSHBUG00000021221	sar1ab	100	87.374	Haplochromis_burtoni
ENSGACG00000008616	sar1ab	100	92.424	ENSHCOG00000002845	sar1ab	80	92.424	Hippocampus_comes
ENSGACG00000008616	sar1ab	100	90.909	ENSKMAG00000018006	sar1ab	100	90.909	Kryptolebias_marmoratus
ENSGACG00000008616	sar1ab	100	94.444	ENSLBEG00000001114	sar1ab	100	94.444	Labrus_bergylta
ENSGACG00000008616	sar1ab	100	95.960	ENSMAMG00000021314	sar1ab	100	95.960	Mastacembelus_armatus
ENSGACG00000008616	sar1ab	100	87.374	ENSMZEG00005027606	sar1ab	100	87.374	Maylandia_zebra
ENSGACG00000008616	sar1ab	100	94.444	ENSMMOG00000010360	sar1ab	100	94.444	Mola_mola
ENSGACG00000008616	sar1ab	100	94.444	ENSMALG00000005831	sar1ab	100	94.444	Monopterus_albus
ENSGACG00000008616	sar1ab	100	87.879	ENSNBRG00000018772	sar1ab	100	87.879	Neolamprologus_brichardi
ENSGACG00000008616	sar1ab	100	88.889	ENSONIG00000018509	sar1ab	100	88.889	Oreochromis_niloticus
ENSGACG00000008616	sar1ab	100	83.838	ENSORLG00000009132	-	90	83.838	Oryzias_latipes
ENSGACG00000008616	sar1ab	100	89.394	ENSORLG00000006779	sar1ab	67	89.394	Oryzias_latipes
ENSGACG00000008616	sar1ab	100	83.838	ENSORLG00020007024	-	90	83.838	Oryzias_latipes_hni
ENSGACG00000008616	sar1ab	100	89.899	ENSORLG00020005458	sar1ab	100	89.899	Oryzias_latipes_hni
ENSGACG00000008616	sar1ab	100	84.343	ENSORLG00015006223	-	94	88.393	Oryzias_latipes_hsok
ENSGACG00000008616	sar1ab	100	89.394	ENSORLG00015010542	sar1ab	100	89.394	Oryzias_latipes_hsok
ENSGACG00000008616	sar1ab	100	89.394	ENSOMEG00000004948	sar1ab	100	89.394	Oryzias_melastigma
ENSGACG00000008616	sar1ab	100	83.333	ENSOMEG00000012020	-	100	83.333	Oryzias_melastigma
ENSGACG00000008616	sar1ab	100	87.879	ENSPKIG00000007615	sar1ab	100	87.879	Paramormyrops_kingsleyae
ENSGACG00000008616	sar1ab	100	94.444	ENSPMGG00000013330	sar1ab	100	94.444	Periophthalmus_magnuspinnatus
ENSGACG00000008616	sar1ab	100	92.424	ENSPFOG00000023432	sar1ab	100	92.424	Poecilia_formosa
ENSGACG00000008616	sar1ab	100	92.424	ENSPLAG00000023705	sar1ab	100	92.424	Poecilia_latipinna
ENSGACG00000008616	sar1ab	100	80.303	ENSPMEG00000001717	-	100	80.303	Poecilia_mexicana
ENSGACG00000008616	sar1ab	100	92.424	ENSPMEG00000000559	sar1ab	100	92.424	Poecilia_mexicana
ENSGACG00000008616	sar1ab	100	92.424	ENSPREG00000016098	sar1ab	100	92.424	Poecilia_reticulata
ENSGACG00000008616	sar1ab	100	87.879	ENSPNYG00000011603	sar1ab	100	87.879	Pundamilia_nyererei
ENSGACG00000008616	sar1ab	100	88.889	ENSPNAG00000008007	sar1ab	100	88.889	Pygocentrus_nattereri
ENSGACG00000008616	sar1ab	100	89.899	ENSSFOG00015014010	sar1a	100	89.899	Scleropages_formosus
ENSGACG00000008616	sar1ab	72	80.420	ENSSMAG00000020758	sar1ab	95	80.420	Scophthalmus_maximus
ENSGACG00000008616	sar1ab	100	95.455	ENSSDUG00000010773	sar1ab	100	95.455	Seriola_dumerili
ENSGACG00000008616	sar1ab	100	95.455	ENSSLDG00000025558	sar1ab	100	95.455	Seriola_lalandi_dorsalis
ENSGACG00000008616	sar1ab	100	91.919	ENSSPAG00000009194	sar1ab	100	91.919	Stegastes_partitus
ENSGACG00000008616	sar1ab	100	92.929	ENSTRUG00000007269	sar1ab	100	92.929	Takifugu_rubripes
ENSGACG00000008616	sar1ab	100	91.414	ENSTNIG00000008635	sar1ab	100	91.414	Tetraodon_nigroviridis
ENSGACG00000008616	sar1ab	100	81.313	ENSXMAG00000026223	SAR1A	98	83.761	Xiphophorus_maculatus
ENSGACG00000008616	sar1ab	100	92.929	ENSXMAG00000003130	sar1ab	100	92.929	Xiphophorus_maculatus