EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000008629 (Gene tree)
Gene ID: -
Gene Symbol: ccdc12
Alias: zgc:101038
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 5803 bases
Position: chrgroupXX:9997333-10003135
Accession: ZDB-GENE-040801-108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000011398	cwf18	PF08315.12	4.7e-38	1	1
ENSGACP00000011393	cwf18	PF08315.12	3.4e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000011421	-	492	-	ENSGACP00000011398	163 (aa)	-	G3P1C5
ENSGACT00000011416	-	706	-	ENSGACP00000011393	155 (aa)	-	G3P1C0

Gene Model

Click here to download ENSGACG00000008629's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000008629's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000008629	ccdc12	98	67.081	ENSG00000160799	CCDC12	91	69.079	Homo_sapiens
ENSGACG00000008629	ccdc12	100	88.957	ENSAPOG00000014426	ccdc12	60	88.957	Acanthochromis_polyacanthus
ENSGACG00000008629	ccdc12	98	67.702	ENSAMEG00000012658	CCDC12	96	67.702	Ailuropoda_melanoleuca
ENSGACG00000008629	ccdc12	75	90.164	ENSACIG00000022676	-	87	90.164	Amphilophus_citrinellus
ENSGACG00000008629	ccdc12	71	92.727	ENSACIG00000015192	ccdc12	80	92.857	Amphilophus_citrinellus
ENSGACG00000008629	ccdc12	98	89.937	ENSAOCG00000024127	ccdc12	95	89.937	Amphiprion_ocellaris
ENSGACG00000008629	ccdc12	100	88.957	ENSAPEG00000009155	ccdc12	86	88.957	Amphiprion_percula
ENSGACG00000008629	ccdc12	82	91.045	ENSATEG00000004807	ccdc12	100	91.045	Anabas_testudineus
ENSGACG00000008629	ccdc12	82	71.111	ENSAPLG00000005482	CCDC12	99	71.111	Anas_platyrhynchos
ENSGACG00000008629	ccdc12	97	72.840	ENSACAG00000004727	CCDC12	83	72.840	Anolis_carolinensis
ENSGACG00000008629	ccdc12	82	69.403	ENSANAG00000024483	CCDC12	100	69.403	Aotus_nancymaae
ENSGACG00000008629	ccdc12	95	75.484	ENSACLG00000012742	-	96	75.484	Astatotilapia_calliptera
ENSGACG00000008629	ccdc12	100	85.890	ENSACLG00000005356	ccdc12	100	85.890	Astatotilapia_calliptera
ENSGACG00000008629	ccdc12	100	80.368	ENSAMXG00000016319	ccdc12	100	80.368	Astyanax_mexicanus
ENSGACG00000008629	ccdc12	89	70.345	ENSBTAG00000011311	CCDC12	96	66.258	Bos_taurus
ENSGACG00000008629	ccdc12	83	40.580	WBGene00022092	Y69A2AR.21	85	40.523	Caenorhabditis_elegans
ENSGACG00000008629	ccdc12	98	67.081	ENSCJAG00000002280	CCDC12	96	67.081	Callithrix_jacchus
ENSGACG00000008629	ccdc12	98	67.702	ENSCAFG00000013588	CCDC12	96	67.702	Canis_familiaris
ENSGACG00000008629	ccdc12	98	67.702	ENSCAFG00020014024	CCDC12	89	67.702	Canis_lupus_dingo
ENSGACG00000008629	ccdc12	89	70.345	ENSCHIG00000014512	CCDC12	96	66.258	Capra_hircus
ENSGACG00000008629	ccdc12	98	66.460	ENSTSYG00000032837	CCDC12	96	66.460	Carlito_syrichta
ENSGACG00000008629	ccdc12	50	78.205	ENSCAPG00000007935	CCDC12	79	77.381	Cavia_aperea
ENSGACG00000008629	ccdc12	98	67.702	ENSCPOG00000032515	CCDC12	96	67.702	Cavia_porcellus
ENSGACG00000008629	ccdc12	98	67.081	ENSCCAG00000020126	CCDC12	84	69.079	Cebus_capucinus
ENSGACG00000008629	ccdc12	93	57.895	ENSCATG00000033681	CCDC12	83	57.895	Cercocebus_atys
ENSGACG00000008629	ccdc12	98	67.702	ENSCLAG00000016013	CCDC12	96	67.702	Chinchilla_lanigera
ENSGACG00000008629	ccdc12	98	66.460	ENSCSAG00000016154	CCDC12	84	68.421	Chlorocebus_sabaeus
ENSGACG00000008629	ccdc12	98	71.166	ENSCPBG00000015804	CCDC12	77	71.166	Chrysemys_picta_bellii
ENSGACG00000008629	ccdc12	91	54.000	ENSCING00000005261	-	87	54.000	Ciona_intestinalis
ENSGACG00000008629	ccdc12	98	66.460	ENSCANG00000020857	CCDC12	84	68.421	Colobus_angolensis_palliatus
ENSGACG00000008629	ccdc12	98	67.081	ENSCGRG00001000459	Ccdc12	96	67.081	Cricetulus_griseus_chok1gshd
ENSGACG00000008629	ccdc12	98	67.081	ENSCGRG00000012816	Ccdc12	96	67.081	Cricetulus_griseus_crigri
ENSGACG00000008629	ccdc12	100	86.503	ENSCSEG00000004543	ccdc12	100	86.503	Cynoglossus_semilaevis
ENSGACG00000008629	ccdc12	82	91.045	ENSCVAG00000011342	ccdc12	100	91.045	Cyprinodon_variegatus
ENSGACG00000008629	ccdc12	100	82.209	ENSDARG00000023003	ccdc12	100	82.209	Danio_rerio
ENSGACG00000008629	ccdc12	98	68.323	ENSDORG00000016567	-	96	68.323	Dipodomys_ordii
ENSGACG00000008629	ccdc12	98	62.112	ENSDORG00000024399	-	96	62.112	Dipodomys_ordii
ENSGACG00000008629	ccdc12	99	41.290	FBgn0039732	CG15525	94	41.290	Drosophila_melanogaster
ENSGACG00000008629	ccdc12	66	64.815	ENSETEG00000000030	CCDC12	95	64.815	Echinops_telfairi
ENSGACG00000008629	ccdc12	100	58.896	ENSEBUG00000005674	ccdc12	100	59.146	Eptatretus_burgeri
ENSGACG00000008629	ccdc12	98	67.081	ENSEASG00005008148	-	66	67.081	Equus_asinus_asinus
ENSGACG00000008629	ccdc12	98	61.491	ENSECAG00000008649	CCDC12	96	61.491	Equus_caballus
ENSGACG00000008629	ccdc12	100	82.424	ENSELUG00000024105	ccdc12	100	82.424	Esox_lucius
ENSGACG00000008629	ccdc12	98	67.081	ENSFCAG00000015474	CCDC12	96	67.081	Felis_catus
ENSGACG00000008629	ccdc12	100	63.855	ENSFALG00000001895	CCDC12	100	63.855	Ficedula_albicollis
ENSGACG00000008629	ccdc12	98	67.702	ENSFDAG00000002549	CCDC12	97	67.702	Fukomys_damarensis
ENSGACG00000008629	ccdc12	100	89.571	ENSFHEG00000016247	ccdc12	93	89.571	Fundulus_heteroclitus
ENSGACG00000008629	ccdc12	100	72.393	ENSGMOG00000016901	ccdc12	100	72.393	Gadus_morhua
ENSGACG00000008629	ccdc12	100	89.571	ENSGAFG00000006762	ccdc12	100	89.571	Gambusia_affinis
ENSGACG00000008629	ccdc12	98	71.779	ENSGAGG00000019688	CCDC12	95	71.779	Gopherus_agassizii
ENSGACG00000008629	ccdc12	93	69.079	ENSGGOG00000009012	CCDC12	84	69.079	Gorilla_gorilla
ENSGACG00000008629	ccdc12	100	86.503	ENSHBUG00000016447	ccdc12	100	86.503	Haplochromis_burtoni
ENSGACG00000008629	ccdc12	98	67.702	ENSHGLG00000014058	CCDC12	96	67.702	Heterocephalus_glaber_female
ENSGACG00000008629	ccdc12	98	67.702	ENSHGLG00100005918	CCDC12	96	67.702	Heterocephalus_glaber_male
ENSGACG00000008629	ccdc12	100	85.366	ENSHCOG00000015164	ccdc12	100	85.366	Hippocampus_comes
ENSGACG00000008629	ccdc12	98	79.375	ENSIPUG00000001310	Ccdc12	97	79.375	Ictalurus_punctatus
ENSGACG00000008629	ccdc12	98	68.323	ENSSTOG00000003085	CCDC12	96	68.323	Ictidomys_tridecemlineatus
ENSGACG00000008629	ccdc12	98	67.702	ENSJJAG00000014918	Ccdc12	95	69.291	Jaculus_jaculus
ENSGACG00000008629	ccdc12	100	84.848	ENSKMAG00000013891	ccdc12	100	84.848	Kryptolebias_marmoratus
ENSGACG00000008629	ccdc12	99	90.123	ENSLBEG00000024714	ccdc12	86	90.123	Labrus_bergylta
ENSGACG00000008629	ccdc12	100	79.755	ENSLOCG00000005683	ccdc12	92	79.755	Lepisosteus_oculatus
ENSGACG00000008629	ccdc12	71	76.577	ENSLAFG00000022573	-	98	76.786	Loxodonta_africana
ENSGACG00000008629	ccdc12	98	66.460	ENSLAFG00000027745	-	98	66.460	Loxodonta_africana
ENSGACG00000008629	ccdc12	98	66.460	ENSMFAG00000002976	CCDC12	84	68.421	Macaca_fascicularis
ENSGACG00000008629	ccdc12	98	66.460	ENSMMUG00000019810	CCDC12	84	68.421	Macaca_mulatta
ENSGACG00000008629	ccdc12	98	66.460	ENSMNEG00000035785	CCDC12	84	68.421	Macaca_nemestrina
ENSGACG00000008629	ccdc12	98	66.460	ENSMLEG00000038060	CCDC12	84	68.421	Mandrillus_leucophaeus
ENSGACG00000008629	ccdc12	100	91.411	ENSMAMG00000012165	ccdc12	100	91.411	Mastacembelus_armatus
ENSGACG00000008629	ccdc12	95	76.129	ENSMZEG00005019013	-	96	76.129	Maylandia_zebra
ENSGACG00000008629	ccdc12	100	86.503	ENSMZEG00005014728	ccdc12	100	86.503	Maylandia_zebra
ENSGACG00000008629	ccdc12	82	71.852	ENSMGAG00000002815	CCDC12	90	68.125	Meleagris_gallopavo
ENSGACG00000008629	ccdc12	98	65.839	ENSMAUG00000008879	Ccdc12	96	65.839	Mesocricetus_auratus
ENSGACG00000008629	ccdc12	98	66.049	ENSMICG00000032886	CCDC12	96	66.667	Microcebus_murinus
ENSGACG00000008629	ccdc12	98	66.460	ENSMOCG00000004483	Ccdc12	96	66.460	Microtus_ochrogaster
ENSGACG00000008629	ccdc12	92	75.000	ENSMMOG00000001860	ccdc12	99	75.000	Mola_mola
ENSGACG00000008629	ccdc12	98	60.000	ENSMODG00000022615	-	96	60.000	Monodelphis_domestica
ENSGACG00000008629	ccdc12	98	63.580	ENSMODG00000025021	-	96	63.580	Monodelphis_domestica
ENSGACG00000008629	ccdc12	98	70.988	ENSMODG00000013967	-	96	70.988	Monodelphis_domestica
ENSGACG00000008629	ccdc12	100	90.184	ENSMALG00000011850	ccdc12	100	90.184	Monopterus_albus
ENSGACG00000008629	ccdc12	98	67.081	MGP_CAROLIEiJ_G0032737	-	96	67.081	Mus_caroli
ENSGACG00000008629	ccdc12	98	66.460	ENSMUSG00000019659	Ccdc12	86	78.947	Mus_musculus
ENSGACG00000008629	ccdc12	98	67.081	MGP_PahariEiJ_G0015604	Ccdc12	96	67.081	Mus_pahari
ENSGACG00000008629	ccdc12	98	66.460	MGP_SPRETEiJ_G0033885	Ccdc12	87	78.947	Mus_spretus
ENSGACG00000008629	ccdc12	98	63.975	ENSMLUG00000009547	CCDC12	96	63.975	Myotis_lucifugus
ENSGACG00000008629	ccdc12	98	67.081	ENSNGAG00000004149	Ccdc12	96	67.081	Nannospalax_galili
ENSGACG00000008629	ccdc12	99	78.750	ENSNBRG00000015275	ccdc12	100	78.750	Neolamprologus_brichardi
ENSGACG00000008629	ccdc12	98	67.081	ENSNLEG00000006219	CCDC12	96	67.081	Nomascus_leucogenys
ENSGACG00000008629	ccdc12	93	67.105	ENSOPRG00000005086	CCDC12	91	67.105	Ochotona_princeps
ENSGACG00000008629	ccdc12	98	67.702	ENSODEG00000012202	CCDC12	96	67.702	Octodon_degus
ENSGACG00000008629	ccdc12	100	86.503	ENSONIG00000003061	ccdc12	100	86.503	Oreochromis_niloticus
ENSGACG00000008629	ccdc12	81	73.684	ENSOANG00000004263	-	100	73.684	Ornithorhynchus_anatinus
ENSGACG00000008629	ccdc12	98	67.081	ENSOCUG00000012431	CCDC12	82	67.081	Oryctolagus_cuniculus
ENSGACG00000008629	ccdc12	100	84.848	ENSORLG00000008126	ccdc12	100	84.848	Oryzias_latipes
ENSGACG00000008629	ccdc12	100	87.730	ENSORLG00020013927	ccdc12	100	87.730	Oryzias_latipes_hni
ENSGACG00000008629	ccdc12	100	87.730	ENSORLG00015020115	ccdc12	100	87.730	Oryzias_latipes_hsok
ENSGACG00000008629	ccdc12	100	89.571	ENSOMEG00000014082	ccdc12	100	89.571	Oryzias_melastigma
ENSGACG00000008629	ccdc12	100	89.571	ENSOMEG00000022304	ccdc12	100	89.571	Oryzias_melastigma
ENSGACG00000008629	ccdc12	71	72.973	ENSOGAG00000016807	CCDC12	100	73.214	Otolemur_garnettii
ENSGACG00000008629	ccdc12	73	73.950	ENSOARG00000006426	CCDC12	100	68.613	Ovis_aries
ENSGACG00000008629	ccdc12	93	69.079	ENSPPAG00000028782	CCDC12	84	69.079	Pan_paniscus
ENSGACG00000008629	ccdc12	98	67.081	ENSPPRG00000013547	CCDC12	96	67.081	Panthera_pardus
ENSGACG00000008629	ccdc12	98	67.081	ENSPTIG00000014875	CCDC12	92	67.081	Panthera_tigris_altaica
ENSGACG00000008629	ccdc12	93	69.079	ENSPTRG00000014862	CCDC12	84	69.079	Pan_troglodytes
ENSGACG00000008629	ccdc12	98	66.460	ENSPANG00000017485	CCDC12	86	68.421	Papio_anubis
ENSGACG00000008629	ccdc12	100	73.780	ENSPKIG00000019130	ccdc12	100	76.829	Paramormyrops_kingsleyae
ENSGACG00000008629	ccdc12	71	84.545	ENSPSIG00000010867	CCDC12	100	84.685	Pelodiscus_sinensis
ENSGACG00000008629	ccdc12	100	86.503	ENSPMGG00000012211	ccdc12	100	86.503	Periophthalmus_magnuspinnatus
ENSGACG00000008629	ccdc12	98	53.704	ENSPEMG00000001376	-	96	53.704	Peromyscus_maniculatus_bairdii
ENSGACG00000008629	ccdc12	98	67.081	ENSPEMG00000022196	-	96	67.081	Peromyscus_maniculatus_bairdii
ENSGACG00000008629	ccdc12	96	73.248	ENSPMAG00000000005	ccdc12	92	73.248	Petromyzon_marinus
ENSGACG00000008629	ccdc12	98	71.069	ENSPCIG00000025941	CCDC12	96	71.069	Phascolarctos_cinereus
ENSGACG00000008629	ccdc12	88	90.972	ENSPFOG00000000343	ccdc12	100	90.798	Poecilia_formosa
ENSGACG00000008629	ccdc12	100	89.571	ENSPLAG00000019010	ccdc12	100	89.571	Poecilia_latipinna
ENSGACG00000008629	ccdc12	88	90.972	ENSPMEG00000022371	ccdc12	81	90.798	Poecilia_mexicana
ENSGACG00000008629	ccdc12	100	90.184	ENSPREG00000020932	ccdc12	81	90.184	Poecilia_reticulata
ENSGACG00000008629	ccdc12	93	69.079	ENSPPYG00000013924	CCDC12	75	69.079	Pongo_abelii
ENSGACG00000008629	ccdc12	98	67.284	ENSPCAG00000005800	CCDC12	96	67.284	Procavia_capensis
ENSGACG00000008629	ccdc12	98	66.049	ENSPCOG00000018682	CCDC12	89	66.667	Propithecus_coquereli
ENSGACG00000008629	ccdc12	98	67.081	ENSPVAG00000004204	CCDC12	96	67.081	Pteropus_vampyrus
ENSGACG00000008629	ccdc12	100	86.503	ENSPNYG00000016295	ccdc12	100	86.503	Pundamilia_nyererei
ENSGACG00000008629	ccdc12	100	63.415	ENSPNAG00000028558	ccdc12	100	80.645	Pygocentrus_nattereri
ENSGACG00000008629	ccdc12	98	67.081	ENSRNOG00000020946	Ccdc12	96	67.081	Rattus_norvegicus
ENSGACG00000008629	ccdc12	93	68.421	ENSRBIG00000039910	CCDC12	84	68.421	Rhinopithecus_bieti
ENSGACG00000008629	ccdc12	98	66.460	ENSRROG00000039721	CCDC12	96	66.460	Rhinopithecus_roxellana
ENSGACG00000008629	ccdc12	98	67.081	ENSSBOG00000035443	CCDC12	84	69.079	Saimiri_boliviensis_boliviensis
ENSGACG00000008629	ccdc12	98	71.250	ENSSHAG00000003265	-	96	71.250	Sarcophilus_harrisii
ENSGACG00000008629	ccdc12	100	76.220	ENSSFOG00015001307	ccdc12	100	76.220	Scleropages_formosus
ENSGACG00000008629	ccdc12	91	91.216	ENSSMAG00000019856	ccdc12	100	90.244	Scophthalmus_maximus
ENSGACG00000008629	ccdc12	100	87.730	ENSSDUG00000006549	ccdc12	100	87.730	Seriola_dumerili
ENSGACG00000008629	ccdc12	100	92.638	ENSSLDG00000015956	ccdc12	100	92.638	Seriola_lalandi_dorsalis
ENSGACG00000008629	ccdc12	89	54.225	ENSSPUG00000013054	CCDC12	91	54.225	Sphenodon_punctatus
ENSGACG00000008629	ccdc12	100	90.798	ENSSPAG00000007010	ccdc12	100	90.798	Stegastes_partitus
ENSGACG00000008629	ccdc12	98	66.875	ENSSSCG00000011329	-	96	66.875	Sus_scrofa
ENSGACG00000008629	ccdc12	90	42.857	ENSSSCG00000007882	-	93	42.857	Sus_scrofa
ENSGACG00000008629	ccdc12	66	66.055	ENSTGUG00000000186	CCDC12	86	66.055	Taeniopygia_guttata
ENSGACG00000008629	ccdc12	100	78.710	ENSTRUG00000014023	ccdc12	85	78.710	Takifugu_rubripes
ENSGACG00000008629	ccdc12	100	79.755	ENSTNIG00000018407	ccdc12	98	79.755	Tetraodon_nigroviridis
ENSGACG00000008629	ccdc12	98	44.444	ENSTBEG00000000048	CCDC12	96	44.444	Tupaia_belangeri
ENSGACG00000008629	ccdc12	98	64.198	ENSTTRG00000015854	CCDC12	96	64.198	Tursiops_truncatus
ENSGACG00000008629	ccdc12	98	61.491	ENSUAMG00000025548	CCDC12	93	71.852	Ursus_americanus
ENSGACG00000008629	ccdc12	98	67.702	ENSUMAG00000004346	CCDC12	96	67.702	Ursus_maritimus
ENSGACG00000008629	ccdc12	66	56.481	ENSVPAG00000000070	-	95	57.009	Vicugna_pacos
ENSGACG00000008629	ccdc12	98	67.702	ENSVVUG00000004582	CCDC12	96	67.702	Vulpes_vulpes
ENSGACG00000008629	ccdc12	82	76.119	ENSXETG00000013123	ccdc12	99	76.119	Xenopus_tropicalis
ENSGACG00000008629	ccdc12	100	89.571	ENSXCOG00000019741	ccdc12	100	89.571	Xiphophorus_couchianus
ENSGACG00000008629	ccdc12	100	88.957	ENSXMAG00000014098	ccdc12	81	88.957	Xiphophorus_maculatus