EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGACG00000008659 (Gene tree)
Gene ID
-
Gene Symbol
rab5c
Alias
wu:fb98b08|wu:fi16g01
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Gasterosteus_aculeatus
Status
putative
Strand
Plus strand
Length
3089 bases
Position
chrgroupXI:5870465-5873553
Accession
ZDB-GENE-031118-30
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGACP00000011448MMR_HSR1PF01926.230.0001111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGACT00000011471-977-ENSGACP00000011448220 (aa)-G3P1H5
Gene Model
Click here to download ENSGACG00000008659's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000008659's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGACG00000008659rab5c7437.805ENSGACG00000020437-7838.365
ENSGACG00000008659rab5c8131.414ENSGACG00000011607rab32b7531.737
ENSGACG00000008659rab5c6632.432ENSGACG00000019134si:cabz01085950.17232.432
ENSGACG00000008659rab5c7843.860ENSGACG00000013401zgc:1719278244.785
ENSGACG00000008659rab5c9034.826ENSGACG00000016639rab127738.690
ENSGACG00000008659rab5c8831.034ENSGACG00000014678rab366133.750
ENSGACG00000008659rab5c8138.587ENSGACG00000019540rab33ba8238.587
ENSGACG00000008659rab5c8835.266ENSGACG00000007722rab158840.411
ENSGACG00000008659rab5c8830.583ENSGACG00000011190rab34a6032.919
ENSGACG00000008659rab5c7345.963ENSGACG00000013297-7345.963
ENSGACG00000008659rab5c8641.237ENSGACG00000013721rab6bb8642.162
ENSGACG00000008659rab5c7032.468ENSGACG00000016680rheb8333.117
ENSGACG00000008659rab5c7644.910ENSGACG00000017153rab417944.910
ENSGACG00000008659rab5c7347.561ENSGACG00000013249rab25b7847.561
ENSGACG00000008659rab5c7132.984ENSGACG00000003527rab208032.984
ENSGACG00000008659rab5c8937.755ENSGACG00000013548rab35b9637.755
ENSGACG00000008659rab5c9981.106ENSGACG00000004997rab5aa9981.019
ENSGACG00000008659rab5c8931.707ENSGACG00000010473RAB298033.918
ENSGACG00000008659rab5c7432.515ENSGACG00000011661kras8332.515
ENSGACG00000008659rab5c9138.835ENSGACG00000000807-9638.835
ENSGACG00000008659rab5c7238.750ENSGACG00000005397si:ch211-247i17.19138.750
ENSGACG00000008659rab5c7238.365ENSGACG00000005979RAB157738.365
ENSGACG00000008659rab5c9542.857ENSGACG00000003864rab1ab8047.239
ENSGACG00000008659rab5c8236.559ENSGACG00000001725zgc:1015597936.559
ENSGACG00000008659rab5c7234.810ENSGACG00000006151rab236836.875
ENSGACG00000008659rab5c9139.130ENSGACG00000003726rab6ba8243.503
ENSGACG00000008659rab5c8740.933ENSGACG00000001694rab18a9341.089
ENSGACG00000008659rab5c7634.857ENSGACG00000018291rab9b8434.857
ENSGACG00000008659rab5c8136.066ENSGACG00000018745rab33a7836.066
ENSGACG00000008659rab5c8331.383ENSGACG00000011340hrasb8731.138
ENSGACG00000008659rab5c7347.205ENSGACG00000015479rab11bb7447.205
ENSGACG00000008659rab5c7430.675ENSGACG00000000729rhebl18830.675
ENSGACG00000008659rab5c7641.667ENSGACG00000014905rab2a7542.857
ENSGACG00000008659rab5c8943.284ENSGACG00000004965rab25a9443.284
ENSGACG00000008659rab5c7334.320ENSGACG00000014578RAB9A8334.320
ENSGACG00000008659rab5c7334.756ENSGACG00000012474rabl27134.756
ENSGACG00000008659rab5c7842.045ENSGACG00000009647RAB7A8542.045
ENSGACG00000008659rab5c9986.697ENSGACG00000006162-9986.697
ENSGACG00000008659rab5c7952.601ENSGACG00000005608rab22a8453.988
ENSGACG00000008659rab5c7644.311ENSGACG00000012006rab308444.311
ENSGACG00000008659rab5c7733.333ENSGACG00000003972rab9a8533.333
ENSGACG00000008659rab5c8942.079ENSGACG00000013259rab11al7348.408
ENSGACG00000008659rab5c6130.282ENSGACG00000011972arl8bb7330.282
ENSGACG00000008659rab5c8942.564ENSGACG00000000789rab1ba8046.626
ENSGACG00000008659rab5c7343.827ENSGACG00000018847-7243.827
ENSGACG00000008659rab5c7436.970ENSGACG00000001950RAB39B7736.970
ENSGACG00000008659rab5c8537.113ENSGACG00000019767-9037.113
ENSGACG00000008659rab5c7643.713ENSGACG00000020356rab6a8043.713
ENSGACG00000008659rab5c8943.077ENSGACG00000019642-8047.239
ENSGACG00000008659rab5c7842.105ENSGACG00000016799-9942.105
ENSGACG00000008659rab5c8936.548ENSGACG00000014915si:dkey-16l2.169337.811
ENSGACG00000008659rab5c8832.353ENSGACG00000020514rab34b6233.750
ENSGACG00000008659rab5c7236.709ENSGACG00000013611-7736.709
ENSGACG00000008659rab5c8939.320ENSGACG00000016164rab4a7442.593
ENSGACG00000008659rab5c8339.344ENSGACG00000011925rab138340.476
ENSGACG00000008659rab5c9041.294ENSGACG00000016395rab18b8044.242
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGACG00000008659rab5c9986.175ENSG00000108774RAB5C10095.161Homo_sapiens
ENSGACG00000008659rab5c10092.727ENSAPOG00000016864rab5c10092.727Acanthochromis_polyacanthus
ENSGACG00000008659rab5c9986.175ENSAMEG00000006003RAB5C8794.681Ailuropoda_melanoleuca
ENSGACG00000008659rab5c10092.273ENSACIG00000010896rab5c10092.273Amphilophus_citrinellus
ENSGACG00000008659rab5c10092.727ENSAOCG00000016614rab5c10092.727Amphiprion_ocellaris
ENSGACG00000008659rab5c9892.130ENSAPEG00000017868-9992.558Amphiprion_percula
ENSGACG00000008659rab5c9993.088ENSATEG00000001937rab5c9993.088Anabas_testudineus
ENSGACG00000008659rab5c9091.457ENSANAG00000025390RAB5C9294.149Aotus_nancymaae
ENSGACG00000008659rab5c9586.667ENSACLG00000008615-9985.455Astatotilapia_calliptera
ENSGACG00000008659rab5c10090.909ENSACLG00000002706rab5c10090.909Astatotilapia_calliptera
ENSGACG00000008659rab5c9589.423ENSAMXG00000037267-9989.423Astyanax_mexicanus
ENSGACG00000008659rab5c10093.213ENSAMXG00000043717rab5c10093.213Astyanax_mexicanus
ENSGACG00000008659rab5c9886.574ENSBTAG00000006982RAB5C8794.149Bos_taurus
ENSGACG00000008659rab5c9674.057WBGene00004268rab-59972.685Caenorhabditis_elegans
ENSGACG00000008659rab5c9986.175ENSCAFG00000015629RAB5C8794.681Canis_familiaris
ENSGACG00000008659rab5c9986.175ENSCAFG00020013537RAB5C8794.681Canis_lupus_dingo
ENSGACG00000008659rab5c9886.574ENSCHIG00000012960RAB5C8794.149Capra_hircus
ENSGACG00000008659rab5c9887.037ENSTSYG00000030531RAB5C8794.681Carlito_syrichta
ENSGACG00000008659rab5c9886.574ENSCCAG00000025940RAB5C8794.149Cebus_capucinus
ENSGACG00000008659rab5c9886.574ENSCATG00000040873RAB5C8794.681Cercocebus_atys
ENSGACG00000008659rab5c9887.037ENSCLAG00000016650RAB5C8794.149Chinchilla_lanigera
ENSGACG00000008659rab5c8193.820ENSCHOG00000009886RAB5C10093.820Choloepus_hoffmanni
ENSGACG00000008659rab5c9975.576ENSCING00000003340-9975.576Ciona_intestinalis
ENSGACG00000008659rab5c9975.336ENSCSAVG00000000613-9983.333Ciona_savignyi
ENSGACG00000008659rab5c9886.574ENSCGRG00001014226Rab5c8794.681Cricetulus_griseus_chok1gshd
ENSGACG00000008659rab5c9886.574ENSCGRG00000007534Rab5c8794.681Cricetulus_griseus_crigri
ENSGACG00000008659rab5c10090.909ENSCSEG00000017024rab5c10090.909Cynoglossus_semilaevis
ENSGACG00000008659rab5c10091.818ENSCVAG00000009550rab5c10091.818Cyprinodon_variegatus
ENSGACG00000008659rab5c9886.574ENSDNOG00000038853RAB5C8992.778Dasypus_novemcinctus
ENSGACG00000008659rab5c9887.500ENSDORG00000006819Rab5c8795.213Dipodomys_ordii
ENSGACG00000008659rab5c9871.628FBgn0014010Rab58480.000Drosophila_melanogaster
ENSGACG00000008659rab5c8584.946ENSEBUG00000014794rab5c8884.946Eptatretus_burgeri
ENSGACG00000008659rab5c9986.175ENSEASG00005009281RAB5C8794.681Equus_asinus_asinus
ENSGACG00000008659rab5c9887.037ENSECAG00000025054RAB5C8794.681Equus_caballus
ENSGACG00000008659rab5c9886.574ENSEEUG00000002790RAB5C8794.149Erinaceus_europaeus
ENSGACG00000008659rab5c9891.667ENSELUG00000018516rab5c9991.667Esox_lucius
ENSGACG00000008659rab5c10086.364ENSELUG00000010439-10086.364Esox_lucius
ENSGACG00000008659rab5c9886.574ENSFCAG00000002148RAB5C8794.149Felis_catus
ENSGACG00000008659rab5c9886.574ENSFDAG00000021541RAB5C8793.617Fukomys_damarensis
ENSGACG00000008659rab5c9986.697ENSFHEG00000015268-9986.697Fundulus_heteroclitus
ENSGACG00000008659rab5c10092.727ENSFHEG00000012117rab5c10092.727Fundulus_heteroclitus
ENSGACG00000008659rab5c7688.690ENSGMOG00000001876-9788.690Gadus_morhua
ENSGACG00000008659rab5c10091.364ENSGMOG00000015096rab5c10091.364Gadus_morhua
ENSGACG00000008659rab5c9389.320ENSGAFG00000003642-9985.973Gambusia_affinis
ENSGACG00000008659rab5c10092.727ENSGAFG00000000884rab5c10092.727Gambusia_affinis
ENSGACG00000008659rab5c9886.574ENSGGOG00000005472RAB5C8794.681Gorilla_gorilla
ENSGACG00000008659rab5c9586.667ENSHBUG00000006823-9985.455Haplochromis_burtoni
ENSGACG00000008659rab5c10090.909ENSHBUG00000002014rab5c10090.909Haplochromis_burtoni
ENSGACG00000008659rab5c9886.111ENSHGLG00000012067RAB5C8793.085Heterocephalus_glaber_female
ENSGACG00000008659rab5c9993.578ENSHCOG00000004662rab5c9793.578Hippocampus_comes
ENSGACG00000008659rab5c9184.000ENSHCOG00000020238-9980.822Hippocampus_comes
ENSGACG00000008659rab5c9390.732ENSIPUG00000020082rab5c10089.640Ictalurus_punctatus
ENSGACG00000008659rab5c9886.697ENSSTOG00000006620RAB5C8794.681Ictidomys_tridecemlineatus
ENSGACG00000008659rab5c9887.037ENSJJAG00000021181Rab5c8794.681Jaculus_jaculus
ENSGACG00000008659rab5c9985.780ENSKMAG00000017417-9985.780Kryptolebias_marmoratus
ENSGACG00000008659rab5c10092.273ENSKMAG00000020038rab5c10092.273Kryptolebias_marmoratus
ENSGACG00000008659rab5c10092.727ENSLBEG00000004128rab5c10092.727Labrus_bergylta
ENSGACG00000008659rab5c10086.878ENSLBEG00000010408-10086.878Labrus_bergylta
ENSGACG00000008659rab5c9888.889ENSLOCG00000012566rab5c10088.426Lepisosteus_oculatus
ENSGACG00000008659rab5c9886.574ENSMFAG00000039627RAB5C8794.681Macaca_fascicularis
ENSGACG00000008659rab5c9886.574ENSMNEG00000000355RAB5C8794.681Macaca_nemestrina
ENSGACG00000008659rab5c9987.156ENSMAMG00000016207-9987.156Mastacembelus_armatus
ENSGACG00000008659rab5c10092.273ENSMAMG00000022322rab5c10092.273Mastacembelus_armatus
ENSGACG00000008659rab5c10090.909ENSMZEG00005022735rab5c10090.909Maylandia_zebra
ENSGACG00000008659rab5c9586.667ENSMZEG00005021090-9985.455Maylandia_zebra
ENSGACG00000008659rab5c9887.037ENSMAUG00000015005Rab5c8794.681Mesocricetus_auratus
ENSGACG00000008659rab5c9887.037ENSMICG00000041608RAB5C8794.681Microcebus_murinus
ENSGACG00000008659rab5c9887.037ENSMOCG00000018531-8794.681Microtus_ochrogaster
ENSGACG00000008659rab5c10091.818ENSMMOG00000020621rab5c10091.818Mola_mola
ENSGACG00000008659rab5c9886.636ENSMALG00000022348-9986.636Monopterus_albus
ENSGACG00000008659rab5c9886.512ENSMALG00000006052rab5c9786.758Monopterus_albus
ENSGACG00000008659rab5c9887.037MGP_CAROLIEiJ_G0017184Rab5c8794.681Mus_caroli
ENSGACG00000008659rab5c9887.037ENSMUSG00000019173Rab5c8794.681Mus_musculus
ENSGACG00000008659rab5c9887.037MGP_PahariEiJ_G0018314Rab5c8794.681Mus_pahari
ENSGACG00000008659rab5c9887.037MGP_SPRETEiJ_G0018027Rab5c8794.681Mus_spretus
ENSGACG00000008659rab5c9986.175ENSMPUG00000010554RAB5C8794.681Mustela_putorius_furo
ENSGACG00000008659rab5c9886.574ENSNGAG00000010286Rab5c8794.149Nannospalax_galili
ENSGACG00000008659rab5c10091.818ENSNBRG00000018165rab5c10091.818Neolamprologus_brichardi
ENSGACG00000008659rab5c9586.667ENSNBRG00000016922-9985.455Neolamprologus_brichardi
ENSGACG00000008659rab5c8187.640ENSOPRG00000008255RAB5C10087.640Ochotona_princeps
ENSGACG00000008659rab5c9886.574ENSODEG00000017920RAB5C9985.648Octodon_degus
ENSGACG00000008659rab5c10091.818ENSONIG00000001113rab5c10091.818Oreochromis_niloticus
ENSGACG00000008659rab5c9991.705ENSORLG00000003882rab5c9991.705Oryzias_latipes
ENSGACG00000008659rab5c9991.705ENSORLG00020008388rab5c9991.705Oryzias_latipes_hni
ENSGACG00000008659rab5c9991.705ENSORLG00015021900rab5c9991.705Oryzias_latipes_hsok
ENSGACG00000008659rab5c9991.705ENSOMEG00000023078rab5c9991.705Oryzias_melastigma
ENSGACG00000008659rab5c9887.037ENSOGAG00000009456RAB5C8794.681Otolemur_garnettii
ENSGACG00000008659rab5c9886.574ENSOARG00000018768RAB5C8794.149Ovis_aries
ENSGACG00000008659rab5c9886.574ENSPPAG00000037206RAB5C8794.681Pan_paniscus
ENSGACG00000008659rab5c9886.574ENSPPRG00000005745RAB5C8794.149Panthera_pardus
ENSGACG00000008659rab5c9886.574ENSPTIG00000008177RAB5C8794.149Panthera_tigris_altaica
ENSGACG00000008659rab5c9886.574ENSPTRG00000009194RAB5C8794.681Pan_troglodytes
ENSGACG00000008659rab5c9886.574ENSPKIG00000020112-9986.574Paramormyrops_kingsleyae
ENSGACG00000008659rab5c9887.500ENSPKIG00000001237-9986.111Paramormyrops_kingsleyae
ENSGACG00000008659rab5c10088.182ENSPMGG00000010792rab5c9989.767Periophthalmus_magnuspinnatus
ENSGACG00000008659rab5c9887.037ENSPEMG00000017971Rab5c8794.681Peromyscus_maniculatus_bairdii
ENSGACG00000008659rab5c9876.389ENSPMAG00000007867rab5c8983.511Petromyzon_marinus
ENSGACG00000008659rab5c9878.281ENSPMAG00000000008rab5c8885.417Petromyzon_marinus
ENSGACG00000008659rab5c9975.115ENSPMAG00000001399rab5c8984.946Petromyzon_marinus
ENSGACG00000008659rab5c9986.175ENSPCIG00000020225-8794.681Phascolarctos_cinereus
ENSGACG00000008659rab5c9986.364ENSPLAG00000016333-10086.364Poecilia_latipinna
ENSGACG00000008659rab5c10092.727ENSPLAG00000004790rab5c10092.727Poecilia_latipinna
ENSGACG00000008659rab5c8793.229ENSPMEG00000012614-10086.099Poecilia_mexicana
ENSGACG00000008659rab5c10092.727ENSPMEG00000011336rab5c10092.727Poecilia_mexicana
ENSGACG00000008659rab5c8591.005ENSPREG00000022167-8992.350Poecilia_reticulata
ENSGACG00000008659rab5c10092.727ENSPREG00000010146rab5c10092.727Poecilia_reticulata
ENSGACG00000008659rab5c9886.574ENSPPYG00000008398RAB5C8794.681Pongo_abelii
ENSGACG00000008659rab5c9885.185ENSPCAG00000016412RAB5C8793.617Procavia_capensis
ENSGACG00000008659rab5c9886.574ENSPCOG00000026327RAB5C8794.149Propithecus_coquereli
ENSGACG00000008659rab5c9887.037ENSPVAG00000003867RAB5C8794.681Pteropus_vampyrus
ENSGACG00000008659rab5c10090.909ENSPNYG00000010615rab5c10090.909Pundamilia_nyererei
ENSGACG00000008659rab5c9586.667ENSPNYG00000015851-9985.455Pundamilia_nyererei
ENSGACG00000008659rab5c9588.038ENSPNAG00000002218-9888.038Pygocentrus_nattereri
ENSGACG00000008659rab5c10091.855ENSPNAG00000028138rab5c10091.855Pygocentrus_nattereri
ENSGACG00000008659rab5c9887.037ENSRNOG00000018568Rab5c8794.681Rattus_norvegicus
ENSGACG00000008659rab5c9886.574ENSRBIG00000031376RAB5C8794.681Rhinopithecus_bieti
ENSGACG00000008659rab5c9886.574ENSRROG00000032895RAB5C8794.681Rhinopithecus_roxellana
ENSGACG00000008659rab5c9886.574ENSSBOG00000032552-8794.149Saimiri_boliviensis_boliviensis
ENSGACG00000008659rab5c9887.037ENSSHAG00000005267-8795.213Sarcophilus_harrisii
ENSGACG00000008659rab5c10084.545ENSSFOG00015009988-10084.545Scleropages_formosus
ENSGACG00000008659rab5c9593.780ENSSMAG00000007323rab5c10091.818Scophthalmus_maximus
ENSGACG00000008659rab5c10092.727ENSSDUG00000023008rab5c10092.727Seriola_dumerili
ENSGACG00000008659rab5c10091.818ENSSLDG00000017771rab5c10091.818Seriola_lalandi_dorsalis
ENSGACG00000008659rab5c9887.500ENSSPUG00000012950-8795.213Sphenodon_punctatus
ENSGACG00000008659rab5c10093.182ENSSPAG00000006436rab5c10093.182Stegastes_partitus
ENSGACG00000008659rab5c9886.574ENSSSCG00000032467RAB5C8794.149Sus_scrofa
ENSGACG00000008659rab5c10091.364ENSTRUG00000015590rab5c10091.364Takifugu_rubripes
ENSGACG00000008659rab5c9592.381ENSTNIG00000011711rab5c9592.381Tetraodon_nigroviridis
ENSGACG00000008659rab5c9886.574ENSTBEG00000007092RAB5C8794.681Tupaia_belangeri
ENSGACG00000008659rab5c9985.714ENSTTRG00000006673RAB5C8794.149Tursiops_truncatus
ENSGACG00000008659rab5c9986.175ENSUAMG00000024343RAB5C8794.681Ursus_americanus
ENSGACG00000008659rab5c9986.175ENSUMAG00000023270RAB5C8794.681Ursus_maritimus
ENSGACG00000008659rab5c9389.806ENSXCOG00000006300-9986.425Xiphophorus_couchianus
ENSGACG00000008659rab5c10092.727ENSXCOG00000016788rab5c10092.727Xiphophorus_couchianus
ENSGACG00000008659rab5c9985.909ENSXMAG00000022179-10085.909Xiphophorus_maculatus
ENSGACG00000008659rab5c10092.727ENSXMAG00000003266rab5c10092.727Xiphophorus_maculatus

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