EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000008674 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 18204 bases
Position: chrgroupXVII:8052255-8070458
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000011453	RRM_1	PF00076.22	8.9e-26	1	2
ENSGACP00000011453	RRM_1	PF00076.22	8.9e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000011476	-	1086	-	ENSGACP00000011453	361 (aa)	-	G3P1I0

Gene Model

Click here to download ENSGACG00000008674's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000008674's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000008674	-	50	59.615	ENSGACG00000020302	MSI2	84	63.218
ENSGACG00000008674	-	52	41.176	ENSGACG00000018116	hnrnpaba	75	35.547
ENSGACG00000008674	-	52	37.436	ENSGACG00000004477	hnrnpa3	62	37.629
ENSGACG00000008674	-	52	34.211	ENSGACG00000016447	hnrnpa0b	77	32.900
ENSGACG00000008674	-	50	39.444	ENSGACG00000020830	-	74	37.190
ENSGACG00000008674	-	52	39.572	ENSGACG00000015669	hnrnpd	70	33.333
ENSGACG00000008674	-	100	82.548	ENSGACG00000012679	MSI1	100	82.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000008674	-	100	80.663	ENSG00000135097	MSI1	100	80.663	Homo_sapiens
ENSGACG00000008674	-	100	84.211	ENSAPOG00000023458	-	100	84.211	Acanthochromis_polyacanthus
ENSGACG00000008674	-	100	88.154	ENSAPOG00000003191	MSI1	100	88.154	Acanthochromis_polyacanthus
ENSGACG00000008674	-	94	68.504	ENSAMEG00000013302	MSI1	100	68.504	Ailuropoda_melanoleuca
ENSGACG00000008674	-	91	84.195	ENSACIG00000017754	-	78	84.195	Amphilophus_citrinellus
ENSGACG00000008674	-	100	88.154	ENSAOCG00000003804	MSI1	100	88.154	Amphiprion_ocellaris
ENSGACG00000008674	-	94	75.660	ENSAOCG00000009031	-	95	76.540	Amphiprion_ocellaris
ENSGACG00000008674	-	100	88.154	ENSAPEG00000003245	MSI1	100	88.154	Amphiprion_percula
ENSGACG00000008674	-	100	84.211	ENSAPEG00000006857	-	84	84.211	Amphiprion_percula
ENSGACG00000008674	-	100	80.381	ENSATEG00000017059	MSI1	100	80.381	Anabas_testudineus
ENSGACG00000008674	-	100	81.370	ENSATEG00000023779	-	100	81.370	Anabas_testudineus
ENSGACG00000008674	-	100	80.716	ENSACAG00000002762	MSI1	96	82.709	Anolis_carolinensis
ENSGACG00000008674	-	79	79.021	ENSANAG00000027901	-	88	79.021	Aotus_nancymaae
ENSGACG00000008674	-	100	80.663	ENSANAG00000027151	MSI1	100	80.663	Aotus_nancymaae
ENSGACG00000008674	-	100	87.328	ENSACLG00000011230	MSI1	100	87.328	Astatotilapia_calliptera
ENSGACG00000008674	-	100	84.765	ENSACLG00000000117	-	100	84.765	Astatotilapia_calliptera
ENSGACG00000008674	-	94	80.363	ENSAMXG00000038960	msi1	76	80.363	Astyanax_mexicanus
ENSGACG00000008674	-	100	80.663	ENSBTAG00000009800	MSI1	100	81.818	Bos_taurus
ENSGACG00000008674	-	100	80.663	ENSCJAG00000008578	MSI1	100	80.663	Callithrix_jacchus
ENSGACG00000008674	-	100	80.387	ENSCAFG00000010283	MSI1	100	80.387	Canis_familiaris
ENSGACG00000008674	-	94	81.350	ENSCAFG00020020585	MSI1	100	81.350	Canis_lupus_dingo
ENSGACG00000008674	-	100	79.837	ENSCHIG00000024304	MSI1	100	79.837	Capra_hircus
ENSGACG00000008674	-	94	81.040	ENSTSYG00000033949	MSI1	95	81.040	Carlito_syrichta
ENSGACG00000008674	-	94	85.401	ENSCAPG00000003919	MSI1	78	85.401	Cavia_aperea
ENSGACG00000008674	-	95	81.686	ENSCPOG00000012361	MSI1	100	81.871	Cavia_porcellus
ENSGACG00000008674	-	100	80.663	ENSCCAG00000035567	MSI1	100	80.663	Cebus_capucinus
ENSGACG00000008674	-	100	80.663	ENSCATG00000030019	MSI1	100	80.663	Cercocebus_atys
ENSGACG00000008674	-	94	81.871	ENSCLAG00000011329	MSI1	100	81.871	Chinchilla_lanigera
ENSGACG00000008674	-	75	77.617	ENSCSAG00000002265	MSI1	96	77.617	Chlorocebus_sabaeus
ENSGACG00000008674	-	100	80.939	ENSCPBG00000011349	MSI1	100	80.939	Chrysemys_picta_bellii
ENSGACG00000008674	-	94	81.098	ENSCANG00000040651	MSI1	100	81.098	Colobus_angolensis_palliatus
ENSGACG00000008674	-	100	80.663	ENSCGRG00001018883	Msi1	100	80.663	Cricetulus_griseus_chok1gshd
ENSGACG00000008674	-	94	81.155	ENSCGRG00000002191	Msi1	72	81.155	Cricetulus_griseus_crigri
ENSGACG00000008674	-	100	83.380	ENSCSEG00000008352	-	100	83.380	Cynoglossus_semilaevis
ENSGACG00000008674	-	100	87.603	ENSCSEG00000005834	-	100	87.603	Cynoglossus_semilaevis
ENSGACG00000008674	-	94	75.882	ENSCSEG00000011032	MSI1	100	75.882	Cynoglossus_semilaevis
ENSGACG00000008674	-	100	85.042	ENSCVAG00000009100	MSI1	100	85.042	Cyprinodon_variegatus
ENSGACG00000008674	-	64	74.783	ENSCVAG00000017463	-	89	74.783	Cyprinodon_variegatus
ENSGACG00000008674	-	94	76.453	ENSDARG00000010710	msi1	100	86.283	Danio_rerio
ENSGACG00000008674	-	63	84.649	ENSDARG00000102015	CABZ01037298.1	89	84.649	Danio_rerio
ENSGACG00000008674	-	94	75.380	ENSDNOG00000005713	MSI1	91	75.380	Dasypus_novemcinctus
ENSGACG00000008674	-	94	80.539	ENSDORG00000005610	Msi1	94	80.539	Dipodomys_ordii
ENSGACG00000008674	-	94	77.439	ENSETEG00000004756	MSI1	100	77.439	Echinops_telfairi
ENSGACG00000008674	-	100	80.663	ENSEASG00005004736	MSI1	100	80.663	Equus_asinus_asinus
ENSGACG00000008674	-	100	80.663	ENSECAG00000017526	MSI1	100	80.663	Equus_caballus
ENSGACG00000008674	-	94	78.235	ENSELUG00000023280	-	100	78.235	Esox_lucius
ENSGACG00000008674	-	94	78.670	ENSELUG00000023219	MSI1	92	78.670	Esox_lucius
ENSGACG00000008674	-	100	80.663	ENSFCAG00000011007	MSI1	100	80.663	Felis_catus
ENSGACG00000008674	-	94	81.350	ENSFALG00000007574	MSI1	100	81.350	Ficedula_albicollis
ENSGACG00000008674	-	94	80.793	ENSFDAG00000019586	MSI1	100	80.793	Fukomys_damarensis
ENSGACG00000008674	-	100	84.488	ENSFHEG00000022446	MSI1	100	84.488	Fundulus_heteroclitus
ENSGACG00000008674	-	100	87.603	ENSFHEG00000003560	-	100	87.603	Fundulus_heteroclitus
ENSGACG00000008674	-	100	83.978	ENSGMOG00000017838	-	100	83.425	Gadus_morhua
ENSGACG00000008674	-	100	83.934	ENSGMOG00000001006	MSI1	99	83.934	Gadus_morhua
ENSGACG00000008674	-	94	84.838	ENSGALG00000007227	MSI1	95	75.000	Gallus_gallus
ENSGACG00000008674	-	100	63.736	ENSGAFG00000005860	-	100	63.736	Gambusia_affinis
ENSGACG00000008674	-	94	87.977	ENSGAFG00000021522	MSI1	94	87.977	Gambusia_affinis
ENSGACG00000008674	-	100	80.663	ENSGAGG00000016037	MSI1	100	80.663	Gopherus_agassizii
ENSGACG00000008674	-	94	81.210	ENSGGOG00000010328	MSI1	100	81.210	Gorilla_gorilla
ENSGACG00000008674	-	100	87.328	ENSHBUG00000021921	MSI1	100	87.328	Haplochromis_burtoni
ENSGACG00000008674	-	100	84.765	ENSHBUG00000011841	-	100	84.765	Haplochromis_burtoni
ENSGACG00000008674	-	100	80.387	ENSHGLG00000012782	MSI1	100	80.387	Heterocephalus_glaber_female
ENSGACG00000008674	-	94	80.793	ENSHGLG00100016848	MSI1	100	80.793	Heterocephalus_glaber_male
ENSGACG00000008674	-	100	79.726	ENSHCOG00000012067	-	100	79.726	Hippocampus_comes
ENSGACG00000008674	-	91	85.015	ENSHCOG00000012019	MSI1	100	81.176	Hippocampus_comes
ENSGACG00000008674	-	100	79.501	ENSIPUG00000001976	msi1	97	81.503	Ictalurus_punctatus
ENSGACG00000008674	-	94	81.350	ENSSTOG00000009799	MSI1	100	81.350	Ictidomys_tridecemlineatus
ENSGACG00000008674	-	100	80.663	ENSJJAG00000010463	Msi1	100	80.663	Jaculus_jaculus
ENSGACG00000008674	-	100	69.529	ENSJJAG00000010643	-	100	69.252	Jaculus_jaculus
ENSGACG00000008674	-	94	82.353	ENSKMAG00000019877	-	100	82.353	Kryptolebias_marmoratus
ENSGACG00000008674	-	100	84.488	ENSKMAG00000011251	MSI1	100	84.488	Kryptolebias_marmoratus
ENSGACG00000008674	-	100	84.765	ENSLBEG00000008789	MSI1	100	84.765	Labrus_bergylta
ENSGACG00000008674	-	100	88.705	ENSLBEG00000001375	-	100	88.705	Labrus_bergylta
ENSGACG00000008674	-	94	79.532	ENSLACG00000018287	MSI1	100	79.532	Latimeria_chalumnae
ENSGACG00000008674	-	50	64.545	ENSLOCG00000008618	zgc:110796	71	64.545	Lepisosteus_oculatus
ENSGACG00000008674	-	91	72.508	ENSLAFG00000009412	MSI1	100	72.508	Loxodonta_africana
ENSGACG00000008674	-	94	81.871	ENSMFAG00000001798	MSI1	100	81.871	Macaca_fascicularis
ENSGACG00000008674	-	94	81.871	ENSMMUG00000031527	MSI1	97	81.268	Macaca_mulatta
ENSGACG00000008674	-	100	80.663	ENSMNEG00000040034	MSI1	100	80.663	Macaca_nemestrina
ENSGACG00000008674	-	94	81.098	ENSMLEG00000003921	MSI1	100	81.098	Mandrillus_leucophaeus
ENSGACG00000008674	-	100	83.934	ENSMAMG00000002279	MSI1	100	83.934	Mastacembelus_armatus
ENSGACG00000008674	-	100	87.328	ENSMAMG00000018426	-	100	87.052	Mastacembelus_armatus
ENSGACG00000008674	-	100	84.765	ENSMZEG00005000340	-	100	84.765	Maylandia_zebra
ENSGACG00000008674	-	100	87.328	ENSMZEG00005026892	MSI1	100	87.328	Maylandia_zebra
ENSGACG00000008674	-	61	85.799	ENSMGAG00000016518	-	100	85.799	Meleagris_gallopavo
ENSGACG00000008674	-	67	82.231	ENSMAUG00000016820	Msi1	99	82.231	Mesocricetus_auratus
ENSGACG00000008674	-	100	80.663	ENSMICG00000033181	MSI1	100	80.663	Microcebus_murinus
ENSGACG00000008674	-	100	80.387	ENSMOCG00000002286	Msi1	100	80.387	Microtus_ochrogaster
ENSGACG00000008674	-	100	78.393	ENSMMOG00000012265	-	99	80.952	Mola_mola
ENSGACG00000008674	-	94	70.175	ENSMMOG00000010492	MSI1	99	73.314	Mola_mola
ENSGACG00000008674	-	91	55.120	ENSMODG00000003189	-	100	55.120	Monodelphis_domestica
ENSGACG00000008674	-	100	84.765	ENSMALG00000017889	MSI1	100	84.765	Monopterus_albus
ENSGACG00000008674	-	94	87.059	ENSMALG00000001426	-	100	87.059	Monopterus_albus
ENSGACG00000008674	-	100	80.663	MGP_CAROLIEiJ_G0027626	Msi1	100	80.663	Mus_caroli
ENSGACG00000008674	-	100	80.663	ENSMUSG00000054256	Msi1	100	80.663	Mus_musculus
ENSGACG00000008674	-	100	80.886	MGP_PahariEiJ_G0024206	Msi1	100	80.886	Mus_pahari
ENSGACG00000008674	-	100	80.663	MGP_SPRETEiJ_G0028624	Msi1	100	80.663	Mus_spretus
ENSGACG00000008674	-	94	81.350	ENSMPUG00000003168	MSI1	100	81.350	Mustela_putorius_furo
ENSGACG00000008674	-	91	72.619	ENSMLUG00000010313	MSI1	100	72.619	Myotis_lucifugus
ENSGACG00000008674	-	94	81.155	ENSNGAG00000014508	Msi1	91	81.155	Nannospalax_galili
ENSGACG00000008674	-	100	84.765	ENSNBRG00000000841	-	100	84.765	Neolamprologus_brichardi
ENSGACG00000008674	-	71	83.203	ENSNBRG00000018012	MSI1	99	83.203	Neolamprologus_brichardi
ENSGACG00000008674	-	91	71.341	ENSNLEG00000015636	MSI1	100	71.341	Nomascus_leucogenys
ENSGACG00000008674	-	94	66.159	ENSMEUG00000015759	MSI1	100	66.159	Notamacropus_eugenii
ENSGACG00000008674	-	91	73.651	ENSOPRG00000016879	MSI1	100	73.651	Ochotona_princeps
ENSGACG00000008674	-	94	81.098	ENSODEG00000006328	MSI1	100	81.098	Octodon_degus
ENSGACG00000008674	-	100	84.765	ENSONIG00000011182	MSI1	100	84.765	Oreochromis_niloticus
ENSGACG00000008674	-	100	88.187	ENSONIG00000019452	-	100	88.187	Oreochromis_niloticus
ENSGACG00000008674	-	94	81.350	ENSOCUG00000027716	MSI1	100	81.350	Oryctolagus_cuniculus
ENSGACG00000008674	-	100	84.488	ENSORLG00000019978	-	100	84.488	Oryzias_latipes
ENSGACG00000008674	-	100	87.603	ENSORLG00000029593	MSI1	100	87.603	Oryzias_latipes
ENSGACG00000008674	-	100	84.488	ENSORLG00020001208	-	71	84.488	Oryzias_latipes_hni
ENSGACG00000008674	-	100	87.603	ENSORLG00020008266	MSI1	99	82.698	Oryzias_latipes_hni
ENSGACG00000008674	-	100	84.488	ENSORLG00015013672	-	76	80.055	Oryzias_latipes_hsok
ENSGACG00000008674	-	100	87.603	ENSORLG00015003916	MSI1	100	87.603	Oryzias_latipes_hsok
ENSGACG00000008674	-	100	84.765	ENSOMEG00000017536	MSI1	100	84.765	Oryzias_melastigma
ENSGACG00000008674	-	100	87.603	ENSOMEG00000002272	-	100	87.603	Oryzias_melastigma
ENSGACG00000008674	-	99	78.297	ENSOGAG00000003847	MSI1	96	80.571	Otolemur_garnettii
ENSGACG00000008674	-	94	78.788	ENSOARG00000012097	MSI1	100	78.788	Ovis_aries
ENSGACG00000008674	-	94	81.098	ENSPPAG00000043073	MSI1	100	81.098	Pan_paniscus
ENSGACG00000008674	-	100	80.663	ENSPPRG00000000370	MSI1	100	80.663	Panthera_pardus
ENSGACG00000008674	-	94	81.350	ENSPTIG00000008913	MSI1	100	81.350	Panthera_tigris_altaica
ENSGACG00000008674	-	100	80.663	ENSPTRG00000005531	MSI1	100	80.663	Pan_troglodytes
ENSGACG00000008674	-	100	80.387	ENSPANG00000006335	MSI1	100	80.387	Papio_anubis
ENSGACG00000008674	-	100	85.873	ENSPKIG00000016497	MSI1	100	85.873	Paramormyrops_kingsleyae
ENSGACG00000008674	-	100	83.102	ENSPKIG00000023575	-	100	83.102	Paramormyrops_kingsleyae
ENSGACG00000008674	-	63	83.333	ENSPSIG00000009621	-	100	83.333	Pelodiscus_sinensis
ENSGACG00000008674	-	94	78.006	ENSPSIG00000011608	-	93	77.778	Pelodiscus_sinensis
ENSGACG00000008674	-	91	79.878	ENSPMGG00000000514	MSI1	97	79.878	Periophthalmus_magnuspinnatus
ENSGACG00000008674	-	94	68.895	ENSPMGG00000007743	-	92	65.774	Periophthalmus_magnuspinnatus
ENSGACG00000008674	-	94	79.822	ENSPEMG00000010491	Msi1	95	79.822	Peromyscus_maniculatus_bairdii
ENSGACG00000008674	-	100	88.154	ENSPFOG00000008319	-	86	88.154	Poecilia_formosa
ENSGACG00000008674	-	100	84.211	ENSPFOG00000013113	MSI1	100	84.211	Poecilia_formosa
ENSGACG00000008674	-	100	84.211	ENSPLAG00000014025	-	100	84.211	Poecilia_latipinna
ENSGACG00000008674	-	100	88.154	ENSPLAG00000012431	-	97	88.154	Poecilia_latipinna
ENSGACG00000008674	-	100	87.603	ENSPMEG00000007025	-	86	87.603	Poecilia_mexicana
ENSGACG00000008674	-	100	84.211	ENSPMEG00000012796	MSI1	100	84.211	Poecilia_mexicana
ENSGACG00000008674	-	96	79.710	ENSPREG00000021416	-	95	79.710	Poecilia_reticulata
ENSGACG00000008674	-	62	79.911	ENSPREG00000014574	-	100	79.911	Poecilia_reticulata
ENSGACG00000008674	-	100	79.834	ENSPPYG00000005027	MSI1	100	79.834	Pongo_abelii
ENSGACG00000008674	-	94	68.864	ENSPCAG00000002300	MSI1	100	68.864	Procavia_capensis
ENSGACG00000008674	-	100	80.663	ENSPCOG00000017341	MSI1	100	80.663	Propithecus_coquereli
ENSGACG00000008674	-	94	64.939	ENSPVAG00000002225	MSI1	100	64.939	Pteropus_vampyrus
ENSGACG00000008674	-	100	87.328	ENSPNYG00000004379	MSI1	100	87.328	Pundamilia_nyererei
ENSGACG00000008674	-	100	84.765	ENSPNYG00000002529	-	100	84.765	Pundamilia_nyererei
ENSGACG00000008674	-	100	80.609	ENSPNAG00000019337	msi1	100	80.609	Pygocentrus_nattereri
ENSGACG00000008674	-	94	81.672	ENSRNOG00000001156	Msi1	100	81.672	Rattus_norvegicus
ENSGACG00000008674	-	94	81.350	ENSRBIG00000036889	MSI1	100	81.350	Rhinopithecus_bieti
ENSGACG00000008674	-	94	80.909	ENSRROG00000041076	MSI1	93	80.909	Rhinopithecus_roxellana
ENSGACG00000008674	-	94	81.871	ENSSBOG00000030259	MSI1	99	81.871	Saimiri_boliviensis_boliviensis
ENSGACG00000008674	-	94	70.915	ENSSHAG00000006834	MSI1	100	70.915	Sarcophilus_harrisii
ENSGACG00000008674	-	94	84.795	ENSSFOG00015005350	MSI1	96	84.795	Scleropages_formosus
ENSGACG00000008674	-	94	86.804	ENSSFOG00015014964	-	95	86.804	Scleropages_formosus
ENSGACG00000008674	-	100	73.407	ENSSMAG00000018824	MSI1	98	77.644	Scophthalmus_maximus
ENSGACG00000008674	-	94	92.336	ENSSMAG00000009156	-	71	92.336	Scophthalmus_maximus
ENSGACG00000008674	-	100	88.430	ENSSDUG00000022697	-	100	88.430	Seriola_dumerili
ENSGACG00000008674	-	100	84.211	ENSSDUG00000001027	MSI1	100	84.211	Seriola_dumerili
ENSGACG00000008674	-	100	84.211	ENSSLDG00000016832	MSI1	100	84.211	Seriola_lalandi_dorsalis
ENSGACG00000008674	-	100	79.834	ENSSLDG00000018706	-	99	83.680	Seriola_lalandi_dorsalis
ENSGACG00000008674	-	100	80.939	ENSSPUG00000015741	MSI1	100	80.939	Sphenodon_punctatus
ENSGACG00000008674	-	52	71.875	ENSSPAG00000015573	zgc:110796	86	71.875	Stegastes_partitus
ENSGACG00000008674	-	94	88.235	ENSSPAG00000013098	-	100	88.235	Stegastes_partitus
ENSGACG00000008674	-	62	64.732	ENSSPAG00000014085	-	100	69.955	Stegastes_partitus
ENSGACG00000008674	-	100	80.387	ENSSSCG00000029365	MSI1	100	81.029	Sus_scrofa
ENSGACG00000008674	-	94	82.164	ENSTGUG00000009534	MSI1	100	82.164	Taeniopygia_guttata
ENSGACG00000008674	-	94	74.085	ENSTRUG00000015636	-	79	76.524	Takifugu_rubripes
ENSGACG00000008674	-	63	84.649	ENSTRUG00000016249	MSI1	100	76.316	Takifugu_rubripes
ENSGACG00000008674	-	99	64.785	ENSTNIG00000019814	-	97	65.278	Tetraodon_nigroviridis
ENSGACG00000008674	-	100	79.945	ENSTNIG00000011469	MSI1	100	79.945	Tetraodon_nigroviridis
ENSGACG00000008674	-	94	75.824	ENSTBEG00000007182	MSI1	100	75.824	Tupaia_belangeri
ENSGACG00000008674	-	94	68.129	ENSTTRG00000005663	MSI1	100	68.129	Tursiops_truncatus
ENSGACG00000008674	-	68	80.465	ENSUAMG00000015514	MSI1	94	80.465	Ursus_americanus
ENSGACG00000008674	-	94	78.176	ENSUMAG00000006176	MSI1	88	78.176	Ursus_maritimus
ENSGACG00000008674	-	94	81.155	ENSVVUG00000020993	MSI1	100	80.480	Vulpes_vulpes
ENSGACG00000008674	-	100	78.022	ENSXETG00000012216	msi1	100	78.082	Xenopus_tropicalis
ENSGACG00000008674	-	94	71.637	ENSXCOG00000017605	MSI1	89	71.637	Xiphophorus_couchianus
ENSGACG00000008674	-	100	85.042	ENSXMAG00000027103	MSI1	100	73.641	Xiphophorus_maculatus
ENSGACG00000008674	-	100	87.879	ENSXMAG00000018237	-	100	87.879	Xiphophorus_maculatus