EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000008682 (Gene tree)
Gene ID: -
Gene Symbol: rbm12b
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2121 bases
Position: chrgroupXX:10067597-10069717
Accession: ZDB-GENE-030131-6428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000011454	RRM_1	PF00076.22	8e-36	1	3
ENSGACP00000011454	RRM_1	PF00076.22	8e-36	2	3
ENSGACP00000011454	RRM_1	PF00076.22	8e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000011477	-	1908	-	ENSGACP00000011454	636 (aa)	-	G3P1I1

Gene Model

Click here to download ENSGACG00000008682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000008682's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000008682	rbm12b	99	69.767	ENSGACG00000004202	rbm12	68	58.772

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000008682	rbm12b	85	44.156	ENSG00000183808	RBM12B	99	75.000	Homo_sapiens
ENSGACG00000008682	rbm12b	71	30.621	ENSAPOG00000008836	zgc:153215	95	30.621	Acanthochromis_polyacanthus
ENSGACG00000008682	rbm12b	99	65.888	ENSAPOG00000013963	rbm12b	100	65.888	Acanthochromis_polyacanthus
ENSGACG00000008682	rbm12b	85	45.455	ENSAMEG00000007134	RBM12B	66	45.455	Ailuropoda_melanoleuca
ENSGACG00000008682	rbm12b	85	61.331	ENSACIG00000014943	rbm12b	97	65.667	Amphilophus_citrinellus
ENSGACG00000008682	rbm12b	72	30.140	ENSACIG00000013317	zgc:153215	99	30.140	Amphilophus_citrinellus
ENSGACG00000008682	rbm12b	99	67.083	ENSAOCG00000024270	rbm12b	100	67.395	Amphiprion_ocellaris
ENSGACG00000008682	rbm12b	72	31.537	ENSAOCG00000010819	zgc:153215	98	31.062	Amphiprion_ocellaris
ENSGACG00000008682	rbm12b	98	45.102	ENSAPEG00000022079	rbm12b	99	67.327	Amphiprion_percula
ENSGACG00000008682	rbm12b	99	65.789	ENSATEG00000004578	rbm12b	97	65.789	Anabas_testudineus
ENSGACG00000008682	rbm12b	72	50.617	ENSATEG00000001886	zgc:153215	76	50.000	Anabas_testudineus
ENSGACG00000008682	rbm12b	99	37.698	ENSAPLG00000002020	RBM12B	100	38.319	Anas_platyrhynchos
ENSGACG00000008682	rbm12b	90	44.000	ENSACAG00000003463	RBM12B	60	44.000	Anolis_carolinensis
ENSGACG00000008682	rbm12b	85	44.156	ENSANAG00000034015	RBM12B	67	44.156	Aotus_nancymaae
ENSGACG00000008682	rbm12b	100	52.405	ENSACLG00000005578	rbm12b	100	52.405	Astatotilapia_calliptera
ENSGACG00000008682	rbm12b	100	63.084	ENSACLG00000005575	rbm12b	98	63.084	Astatotilapia_calliptera
ENSGACG00000008682	rbm12b	73	58.333	ENSAMXG00000020853	zgc:153215	78	46.774	Astyanax_mexicanus
ENSGACG00000008682	rbm12b	99	46.894	ENSAMXG00000041973	rbm12b	100	48.837	Astyanax_mexicanus
ENSGACG00000008682	rbm12b	85	44.156	ENSBTAG00000013408	RBM12B	65	44.156	Bos_taurus
ENSGACG00000008682	rbm12b	85	42.857	ENSCAFG00000009109	RBM12B	57	42.857	Canis_familiaris
ENSGACG00000008682	rbm12b	85	42.857	ENSCAFG00020012203	RBM12B	64	42.857	Canis_lupus_dingo
ENSGACG00000008682	rbm12b	73	39.479	ENSCHIG00000006790	RBM12B	67	39.479	Capra_hircus
ENSGACG00000008682	rbm12b	85	42.857	ENSTSYG00000012515	RBM12B	57	42.857	Carlito_syrichta
ENSGACG00000008682	rbm12b	86	45.455	ENSCAPG00000003543	RBM12B	60	45.455	Cavia_aperea
ENSGACG00000008682	rbm12b	86	45.455	ENSCPOG00000007815	RBM12B	60	45.455	Cavia_porcellus
ENSGACG00000008682	rbm12b	85	44.156	ENSCATG00000030769	RBM12B	65	44.156	Cercocebus_atys
ENSGACG00000008682	rbm12b	86	45.455	ENSCLAG00000017617	RBM12B	60	45.455	Chinchilla_lanigera
ENSGACG00000008682	rbm12b	85	44.156	ENSCSAG00000018559	RBM12B	56	44.156	Chlorocebus_sabaeus
ENSGACG00000008682	rbm12b	83	39.683	ENSCHOG00000008934	RBM12B	58	39.683	Choloepus_hoffmanni
ENSGACG00000008682	rbm12b	99	37.892	ENSCPBG00000003061	RBM12B	100	37.892	Chrysemys_picta_bellii
ENSGACG00000008682	rbm12b	85	44.156	ENSCANG00000030379	RBM12B	65	44.156	Colobus_angolensis_palliatus
ENSGACG00000008682	rbm12b	85	48.052	ENSCGRG00001008710	-	65	48.052	Cricetulus_griseus_chok1gshd
ENSGACG00000008682	rbm12b	99	57.815	ENSCSEG00000004610	rbm12b	97	57.815	Cynoglossus_semilaevis
ENSGACG00000008682	rbm12b	50	31.118	ENSCSEG00000001575	-	91	31.118	Cynoglossus_semilaevis
ENSGACG00000008682	rbm12b	99	56.192	ENSCVAG00000011047	rbm12b	100	56.192	Cyprinodon_variegatus
ENSGACG00000008682	rbm12b	99	43.652	ENSDARG00000079717	rbm12b	100	44.239	Danio_rerio
ENSGACG00000008682	rbm12b	90	39.640	ENSDNOG00000041608	RBM12B	61	39.640	Dasypus_novemcinctus
ENSGACG00000008682	rbm12b	85	45.455	ENSDORG00000024034	-	60	45.455	Dipodomys_ordii
ENSGACG00000008682	rbm12b	75	38.416	ENSETEG00000013005	-	67	38.614	Echinops_telfairi
ENSGACG00000008682	rbm12b	85	44.156	ENSEASG00005016297	RBM12B	64	44.156	Equus_asinus_asinus
ENSGACG00000008682	rbm12b	85	44.156	ENSECAG00000017870	RBM12B	58	44.156	Equus_caballus
ENSGACG00000008682	rbm12b	72	33.482	ENSELUG00000009039	zgc:153215	97	33.482	Esox_lucius
ENSGACG00000008682	rbm12b	87	45.455	ENSFCAG00000029274	RBM12B	67	45.455	Felis_catus
ENSGACG00000008682	rbm12b	99	37.252	ENSFALG00000014893	RBM12B	100	37.659	Ficedula_albicollis
ENSGACG00000008682	rbm12b	99	37.109	ENSFDAG00000005576	RBM12B	68	37.109	Fukomys_damarensis
ENSGACG00000008682	rbm12b	99	57.562	ENSFHEG00000016425	rbm12b	100	57.562	Fundulus_heteroclitus
ENSGACG00000008682	rbm12b	100	56.250	ENSGMOG00000013467	rbm12b	100	56.250	Gadus_morhua
ENSGACG00000008682	rbm12b	99	39.291	ENSGALG00000035129	RBM12B	100	39.403	Gallus_gallus
ENSGACG00000008682	rbm12b	99	59.627	ENSGAFG00000007224	rbm12b	100	60.714	Gambusia_affinis
ENSGACG00000008682	rbm12b	99	38.614	ENSGAGG00000009774	RBM12B	100	38.614	Gopherus_agassizii
ENSGACG00000008682	rbm12b	85	42.857	ENSGGOG00000011909	RBM12B	64	42.857	Gorilla_gorilla
ENSGACG00000008682	rbm12b	72	39.623	ENSHBUG00000016150	zgc:153215	81	39.623	Haplochromis_burtoni
ENSGACG00000008682	rbm12b	100	61.585	ENSHBUG00000016227	rbm12b	100	61.585	Haplochromis_burtoni
ENSGACG00000008682	rbm12b	86	45.455	ENSHGLG00000009063	RBM12B	59	45.455	Heterocephalus_glaber_female
ENSGACG00000008682	rbm12b	86	45.455	ENSHGLG00100021324	RBM12B	59	45.455	Heterocephalus_glaber_male
ENSGACG00000008682	rbm12b	99	54.050	ENSHCOG00000014952	rbm12b	100	54.050	Hippocampus_comes
ENSGACG00000008682	rbm12b	99	43.910	ENSIPUG00000001167	RBM12B	97	44.378	Ictalurus_punctatus
ENSGACG00000008682	rbm12b	72	54.217	ENSIPUG00000019731	zgc:153215	79	54.217	Ictalurus_punctatus
ENSGACG00000008682	rbm12b	87	45.455	ENSSTOG00000027445	RBM12B	69	45.455	Ictidomys_tridecemlineatus
ENSGACG00000008682	rbm12b	99	38.780	ENSJJAG00000004165	-	76	38.780	Jaculus_jaculus
ENSGACG00000008682	rbm12b	72	31.458	ENSKMAG00000004958	zgc:153215	99	31.458	Kryptolebias_marmoratus
ENSGACG00000008682	rbm12b	99	57.276	ENSKMAG00000013715	rbm12b	100	57.477	Kryptolebias_marmoratus
ENSGACG00000008682	rbm12b	99	57.121	ENSKMAG00000013704	rbm12b	97	57.321	Kryptolebias_marmoratus
ENSGACG00000008682	rbm12b	72	30.972	ENSLBEG00000002597	zgc:153215	99	31.579	Labrus_bergylta
ENSGACG00000008682	rbm12b	99	37.693	ENSLACG00000007177	RBM12B	100	38.850	Latimeria_chalumnae
ENSGACG00000008682	rbm12b	99	45.351	ENSLOCG00000018344	rbm12b	100	45.221	Lepisosteus_oculatus
ENSGACG00000008682	rbm12b	87	44.156	ENSLAFG00000029949	RBM12B	68	44.156	Loxodonta_africana
ENSGACG00000008682	rbm12b	85	44.156	ENSMFAG00000045430	RBM12B	65	44.156	Macaca_fascicularis
ENSGACG00000008682	rbm12b	85	44.156	ENSMMUG00000005558	RBM12B	64	44.156	Macaca_mulatta
ENSGACG00000008682	rbm12b	85	44.156	ENSMNEG00000041292	RBM12B	65	44.156	Macaca_nemestrina
ENSGACG00000008682	rbm12b	85	44.156	ENSMLEG00000037288	RBM12B	64	44.156	Mandrillus_leucophaeus
ENSGACG00000008682	rbm12b	99	70.219	ENSMAMG00000011998	rbm12b	100	70.219	Mastacembelus_armatus
ENSGACG00000008682	rbm12b	100	63.240	ENSMZEG00005015005	rbm12b	100	63.240	Maylandia_zebra
ENSGACG00000008682	rbm12b	100	60.592	ENSMZEG00005014845	rbm12b	99	60.250	Maylandia_zebra
ENSGACG00000008682	rbm12b	72	39.623	ENSMZEG00005005435	zgc:153215	81	39.623	Maylandia_zebra
ENSGACG00000008682	rbm12b	73	40.661	ENSMGAG00000011985	RBM12B	99	40.661	Meleagris_gallopavo
ENSGACG00000008682	rbm12b	85	48.052	ENSMAUG00000021752	-	67	48.052	Mesocricetus_auratus
ENSGACG00000008682	rbm12b	87	44.156	ENSMICG00000036969	RBM12B	68	44.156	Microcebus_murinus
ENSGACG00000008682	rbm12b	99	39.381	ENSMOCG00000005603	-	78	39.588	Microtus_ochrogaster
ENSGACG00000008682	rbm12b	99	62.696	ENSMMOG00000002404	rbm12b	94	62.696	Mola_mola
ENSGACG00000008682	rbm12b	99	39.474	ENSMODG00000007436	RBM12B	88	39.613	Monodelphis_domestica
ENSGACG00000008682	rbm12b	99	65.156	ENSMALG00000012059	rbm12b	100	65.156	Monopterus_albus
ENSGACG00000008682	rbm12b	72	32.143	ENSMALG00000001222	zgc:153215	98	32.143	Monopterus_albus
ENSGACG00000008682	rbm12b	85	49.333	ENSMUSG00000052137	Rbm12b2	67	49.333	Mus_musculus
ENSGACG00000008682	rbm12b	85	52.000	ENSMUSG00000046667	Rbm12b1	67	52.000	Mus_musculus
ENSGACG00000008682	rbm12b	88	43.878	MGP_SPRETEiJ_G0026765	-	64	43.878	Mus_spretus
ENSGACG00000008682	rbm12b	88	43.878	MGP_SPRETEiJ_G0026766	-	70	43.878	Mus_spretus
ENSGACG00000008682	rbm12b	85	44.156	ENSMPUG00000018637	RBM12B	56	44.156	Mustela_putorius_furo
ENSGACG00000008682	rbm12b	85	42.857	ENSMLUG00000002359	RBM12B	59	42.857	Myotis_lucifugus
ENSGACG00000008682	rbm12b	87	42.857	ENSNGAG00000002801	-	62	42.857	Nannospalax_galili
ENSGACG00000008682	rbm12b	72	38.679	ENSNBRG00000013644	zgc:153215	81	38.679	Neolamprologus_brichardi
ENSGACG00000008682	rbm12b	100	63.707	ENSNBRG00000015057	rbm12b	100	63.707	Neolamprologus_brichardi
ENSGACG00000008682	rbm12b	85	44.156	ENSNLEG00000032050	RBM12B	64	44.156	Nomascus_leucogenys
ENSGACG00000008682	rbm12b	86	45.455	ENSODEG00000019204	RBM12B	60	45.455	Octodon_degus
ENSGACG00000008682	rbm12b	100	63.551	ENSONIG00000020612	rbm12b	100	63.551	Oreochromis_niloticus
ENSGACG00000008682	rbm12b	99	37.980	ENSOANG00000015735	-	97	38.527	Ornithorhynchus_anatinus
ENSGACG00000008682	rbm12b	85	44.156	ENSOCUG00000010353	RBM12B	65	44.156	Oryctolagus_cuniculus
ENSGACG00000008682	rbm12b	99	57.453	ENSORLG00000008228	rbm12b	97	57.609	Oryzias_latipes
ENSGACG00000008682	rbm12b	99	57.919	ENSORLG00020013619	rbm12b	97	57.919	Oryzias_latipes_hni
ENSGACG00000008682	rbm12b	99	57.609	ENSORLG00015019999	rbm12b	97	57.764	Oryzias_latipes_hsok
ENSGACG00000008682	rbm12b	74	30.932	ENSOMEG00000004220	zgc:153215	98	31.144	Oryzias_melastigma
ENSGACG00000008682	rbm12b	99	61.180	ENSOMEG00000022523	rbm12b	97	61.180	Oryzias_melastigma
ENSGACG00000008682	rbm12b	85	44.156	ENSOGAG00000002979	RBM12B	57	44.156	Otolemur_garnettii
ENSGACG00000008682	rbm12b	87	45.455	ENSPTIG00000020071	RBM12B	66	45.455	Panthera_tigris_altaica
ENSGACG00000008682	rbm12b	85	44.156	ENSPTRG00000020420	RBM12B	64	44.156	Pan_troglodytes
ENSGACG00000008682	rbm12b	85	44.156	ENSPANG00000035535	RBM12B	64	44.156	Papio_anubis
ENSGACG00000008682	rbm12b	72	32.157	ENSPKIG00000014851	zgc:153215	99	32.157	Paramormyrops_kingsleyae
ENSGACG00000008682	rbm12b	99	49.025	ENSPKIG00000018719	rbm12b	99	49.025	Paramormyrops_kingsleyae
ENSGACG00000008682	rbm12b	99	38.928	ENSPSIG00000001348	RBM12B	100	38.928	Pelodiscus_sinensis
ENSGACG00000008682	rbm12b	85	48.052	ENSPEMG00000008279	-	67	48.052	Peromyscus_maniculatus_bairdii
ENSGACG00000008682	rbm12b	94	42.466	ENSPCIG00000008556	RBM12B	88	42.633	Phascolarctos_cinereus
ENSGACG00000008682	rbm12b	99	59.783	ENSPFOG00000020937	rbm12b	97	59.783	Poecilia_formosa
ENSGACG00000008682	rbm12b	72	42.623	ENSPFOG00000017451	zgc:153215	71	42.623	Poecilia_formosa
ENSGACG00000008682	rbm12b	99	61.025	ENSPLAG00000018782	rbm12b	100	61.025	Poecilia_latipinna
ENSGACG00000008682	rbm12b	99	59.627	ENSPMEG00000011418	rbm12b	100	60.714	Poecilia_mexicana
ENSGACG00000008682	rbm12b	99	60.093	ENSPREG00000020770	rbm12b	100	61.180	Poecilia_reticulata
ENSGACG00000008682	rbm12b	85	44.156	ENSPPYG00000018745	RBM12B	56	44.156	Pongo_abelii
ENSGACG00000008682	rbm12b	85	45.455	ENSPCOG00000023546	RBM12B	64	45.455	Propithecus_coquereli
ENSGACG00000008682	rbm12b	85	44.156	ENSPVAG00000011803	RBM12B	61	44.156	Pteropus_vampyrus
ENSGACG00000008682	rbm12b	100	63.396	ENSPNYG00000016696	rbm12b	100	63.396	Pundamilia_nyererei
ENSGACG00000008682	rbm12b	99	45.037	ENSPNAG00000008126	rbm12b	97	45.643	Pygocentrus_nattereri
ENSGACG00000008682	rbm12b	72	30.292	ENSPNAG00000025628	zgc:153215	99	30.292	Pygocentrus_nattereri
ENSGACG00000008682	rbm12b	85	49.333	ENSRNOG00000016330	Rbm12b	67	49.333	Rattus_norvegicus
ENSGACG00000008682	rbm12b	73	39.228	ENSRNOG00000055292	LOC679087	65	39.228	Rattus_norvegicus
ENSGACG00000008682	rbm12b	85	44.156	ENSRBIG00000035046	RBM12B	64	44.156	Rhinopithecus_bieti
ENSGACG00000008682	rbm12b	85	44.156	ENSRROG00000023660	RBM12B	67	44.156	Rhinopithecus_roxellana
ENSGACG00000008682	rbm12b	85	44.156	ENSSBOG00000027592	RBM12B	64	44.156	Saimiri_boliviensis_boliviensis
ENSGACG00000008682	rbm12b	94	41.829	ENSSHAG00000015335	RBM12B	85	41.992	Sarcophilus_harrisii
ENSGACG00000008682	rbm12b	99	48.180	ENSSFOG00015001584	rbm12b	100	48.180	Scleropages_formosus
ENSGACG00000008682	rbm12b	72	32.806	ENSSFOG00015009427	zgc:153215	99	32.806	Scleropages_formosus
ENSGACG00000008682	rbm12b	72	30.723	ENSSMAG00000019013	zgc:153215	96	30.723	Scophthalmus_maximus
ENSGACG00000008682	rbm12b	99	66.459	ENSSMAG00000019708	rbm12b	100	66.459	Scophthalmus_maximus
ENSGACG00000008682	rbm12b	72	31.138	ENSSDUG00000012545	zgc:153215	98	31.138	Seriola_dumerili
ENSGACG00000008682	rbm12b	99	70.229	ENSSDUG00000006856	rbm12b	100	70.229	Seriola_dumerili
ENSGACG00000008682	rbm12b	72	51.852	ENSSLDG00000013581	zgc:153215	76	51.190	Seriola_lalandi_dorsalis
ENSGACG00000008682	rbm12b	99	70.076	ENSSLDG00000016156	rbm12b	100	70.076	Seriola_lalandi_dorsalis
ENSGACG00000008682	rbm12b	75	37.817	ENSSARG00000011845	-	68	37.817	Sorex_araneus
ENSGACG00000008682	rbm12b	73	38.953	ENSSPUG00000016954	RBM12B	91	39.072	Sphenodon_punctatus
ENSGACG00000008682	rbm12b	99	64.486	ENSSPAG00000006774	rbm12b	100	64.486	Stegastes_partitus
ENSGACG00000008682	rbm12b	72	32.688	ENSSPAG00000023584	zgc:153215	98	32.473	Stegastes_partitus
ENSGACG00000008682	rbm12b	85	45.333	ENSSSCG00000006110	RBM12B	57	45.333	Sus_scrofa
ENSGACG00000008682	rbm12b	73	38.523	ENSTGUG00000011860	RBM12B	97	38.523	Taeniopygia_guttata
ENSGACG00000008682	rbm12b	99	57.903	ENSTRUG00000013738	rbm12b	100	57.903	Takifugu_rubripes
ENSGACG00000008682	rbm12b	75	38.552	ENSTBEG00000000449	RBM12B	64	38.552	Tupaia_belangeri
ENSGACG00000008682	rbm12b	85	44.156	ENSUAMG00000023639	RBM12B	64	44.156	Ursus_americanus
ENSGACG00000008682	rbm12b	85	44.156	ENSUMAG00000016008	RBM12B	61	44.156	Ursus_maritimus
ENSGACG00000008682	rbm12b	85	42.857	ENSVVUG00000002694	RBM12B	64	42.857	Vulpes_vulpes
ENSGACG00000008682	rbm12b	100	36.243	ENSXETG00000014694	rbm12b	100	39.158	Xenopus_tropicalis
ENSGACG00000008682	rbm12b	75	33.951	ENSXETG00000014696	rbm12b	70	33.951	Xenopus_tropicalis
ENSGACG00000008682	rbm12b	99	60.870	ENSXMAG00000014213	rbm12b	100	61.957	Xiphophorus_maculatus