EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000008798 (Gene tree)
Gene ID: -
Gene Symbol: si:ch1073-296d18.1
Alias: -
Full Name: si:ch1073-296d18.1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 6187 bases
Position: chrgroupX:13132413-13138599
Accession: ZDB-GENE-120215-181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000011615	PARP	PF00644.20	1.2e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000011638	-	3560	-	ENSGACP00000011615	998 (aa)	-	G3P1Z2

Gene Model

Click here to download ENSGACG00000008798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000008798's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000008798	si:ch1073-296d18.1	84	33.506	ENSG00000178685	PARP10	94	50.633	Homo_sapiens
ENSGACG00000008798	si:ch1073-296d18.1	83	85.567	ENSAPOG00000016910	si:ch1073-296d18.1	78	74.576	Acanthochromis_polyacanthus
ENSGACG00000008798	si:ch1073-296d18.1	55	87.692	ENSAOCG00000007023	-	77	87.692	Amphiprion_ocellaris
ENSGACG00000008798	si:ch1073-296d18.1	51	88.205	ENSAPEG00000005731	si:ch1073-296d18.1	90	81.944	Amphiprion_percula
ENSGACG00000008798	si:ch1073-296d18.1	82	75.200	ENSATEG00000011078	si:ch1073-296d18.1	78	75.200	Anabas_testudineus
ENSGACG00000008798	si:ch1073-296d18.1	82	32.950	ENSANAG00000037218	PARP10	83	33.716	Aotus_nancymaae
ENSGACG00000008798	si:ch1073-296d18.1	57	84.694	ENSACLG00000012196	-	85	76.818	Astatotilapia_calliptera
ENSGACG00000008798	si:ch1073-296d18.1	75	70.466	ENSAMXG00000039891	si:ch1073-296d18.1	70	70.466	Astyanax_mexicanus
ENSGACG00000008798	si:ch1073-296d18.1	63	34.483	ENSBTAG00000009677	PARP10	85	34.375	Bos_taurus
ENSGACG00000008798	si:ch1073-296d18.1	83	31.675	ENSCJAG00000034531	PARP10	82	32.483	Callithrix_jacchus
ENSGACG00000008798	si:ch1073-296d18.1	82	34.496	ENSCHIG00000008072	PARP10	86	35.659	Capra_hircus
ENSGACG00000008798	si:ch1073-296d18.1	82	31.250	ENSTSYG00000005439	PARP10	82	31.923	Carlito_syrichta
ENSGACG00000008798	si:ch1073-296d18.1	67	35.011	ENSCAPG00000014295	PARP10	80	37.726	Cavia_aperea
ENSGACG00000008798	si:ch1073-296d18.1	81	32.867	ENSCPOG00000014235	PARP10	84	32.867	Cavia_porcellus
ENSGACG00000008798	si:ch1073-296d18.1	81	31.842	ENSCCAG00000024610	PARP10	81	32.937	Cebus_capucinus
ENSGACG00000008798	si:ch1073-296d18.1	82	33.563	ENSCATG00000025822	PARP10	80	33.563	Cercocebus_atys
ENSGACG00000008798	si:ch1073-296d18.1	84	32.657	ENSCLAG00000013744	PARP10	99	30.598	Chinchilla_lanigera
ENSGACG00000008798	si:ch1073-296d18.1	82	32.779	ENSCSAG00000008843	PARP10	81	32.819	Chlorocebus_sabaeus
ENSGACG00000008798	si:ch1073-296d18.1	57	63.128	ENSCPBG00000004075	PARP10	65	63.128	Chrysemys_picta_bellii
ENSGACG00000008798	si:ch1073-296d18.1	82	33.276	ENSCANG00000043564	PARP10	80	33.276	Colobus_angolensis_palliatus
ENSGACG00000008798	si:ch1073-296d18.1	85	32.562	ENSCGRG00001012953	Parp10	88	33.499	Cricetulus_griseus_chok1gshd
ENSGACG00000008798	si:ch1073-296d18.1	85	32.562	ENSCGRG00000003088	Parp10	88	33.499	Cricetulus_griseus_crigri
ENSGACG00000008798	si:ch1073-296d18.1	62	58.966	ENSCVAG00000014098	-	87	58.966	Cyprinodon_variegatus
ENSGACG00000008798	si:ch1073-296d18.1	86	64.486	ENSDARG00000087145	si:ch1073-296d18.1	77	64.486	Danio_rerio
ENSGACG00000008798	si:ch1073-296d18.1	81	33.735	ENSDNOG00000046110	PARP10	80	34.601	Dasypus_novemcinctus
ENSGACG00000008798	si:ch1073-296d18.1	70	37.226	ENSEEUG00000005507	PARP10	76	37.226	Erinaceus_europaeus
ENSGACG00000008798	si:ch1073-296d18.1	91	74.882	ENSELUG00000001455	si:ch1073-296d18.1	76	79.114	Esox_lucius
ENSGACG00000008798	si:ch1073-296d18.1	82	32.269	ENSFDAG00000015949	PARP10	85	33.277	Fukomys_damarensis
ENSGACG00000008798	si:ch1073-296d18.1	63	45.131	ENSFHEG00000016698	-	85	45.860	Fundulus_heteroclitus
ENSGACG00000008798	si:ch1073-296d18.1	99	50.299	ENSGMOG00000000853	si:ch1073-296d18.1	100	49.851	Gadus_morhua
ENSGACG00000008798	si:ch1073-296d18.1	84	32.818	ENSGGOG00000001802	PARP10	82	33.276	Gorilla_gorilla
ENSGACG00000008798	si:ch1073-296d18.1	82	33.107	ENSHGLG00000010423	PARP10	77	34.068	Heterocephalus_glaber_female
ENSGACG00000008798	si:ch1073-296d18.1	94	55.714	ENSIPUG00000011187	parp10	75	55.714	Ictalurus_punctatus
ENSGACG00000008798	si:ch1073-296d18.1	82	32.950	ENSJJAG00000017801	Parp10	88	32.950	Jaculus_jaculus
ENSGACG00000008798	si:ch1073-296d18.1	91	80.556	ENSKMAG00000002066	si:ch1073-296d18.1	79	80.556	Kryptolebias_marmoratus
ENSGACG00000008798	si:ch1073-296d18.1	62	81.481	ENSLBEG00000003798	si:ch1073-296d18.1	97	88.830	Labrus_bergylta
ENSGACG00000008798	si:ch1073-296d18.1	82	47.737	ENSLACG00000008645	PARP10	91	46.875	Latimeria_chalumnae
ENSGACG00000008798	si:ch1073-296d18.1	90	53.058	ENSLOCG00000008505	si:ch1073-296d18.1	87	53.058	Lepisosteus_oculatus
ENSGACG00000008798	si:ch1073-296d18.1	82	33.733	ENSMFAG00000044942	PARP10	80	33.733	Macaca_fascicularis
ENSGACG00000008798	si:ch1073-296d18.1	82	33.904	ENSMMUG00000000449	PARP10	80	33.716	Macaca_mulatta
ENSGACG00000008798	si:ch1073-296d18.1	82	33.844	ENSMNEG00000034827	PARP10	80	33.791	Macaca_nemestrina
ENSGACG00000008798	si:ch1073-296d18.1	76	32.252	ENSMLEG00000024662	PARP10	80	32.432	Mandrillus_leucophaeus
ENSGACG00000008798	si:ch1073-296d18.1	67	86.667	ENSMAMG00000003770	si:ch1073-296d18.1	74	81.481	Mastacembelus_armatus
ENSGACG00000008798	si:ch1073-296d18.1	81	34.286	ENSMICG00000016227	PARP10	81	34.370	Microcebus_murinus
ENSGACG00000008798	si:ch1073-296d18.1	81	33.333	ENSMOCG00000000179	Parp10	84	33.390	Microtus_ochrogaster
ENSGACG00000008798	si:ch1073-296d18.1	81	33.473	ENSMODG00000010393	-	85	33.607	Monodelphis_domestica
ENSGACG00000008798	si:ch1073-296d18.1	82	33.779	MGP_CAROLIEiJ_G0019914	Parp10	95	57.143	Mus_caroli
ENSGACG00000008798	si:ch1073-296d18.1	86	32.273	ENSMUSG00000063268	Parp10	95	57.143	Mus_musculus
ENSGACG00000008798	si:ch1073-296d18.1	82	32.343	MGP_PahariEiJ_G0019924	Parp10	95	54.286	Mus_pahari
ENSGACG00000008798	si:ch1073-296d18.1	82	33.956	MGP_SPRETEiJ_G0020817	Parp10	95	57.143	Mus_spretus
ENSGACG00000008798	si:ch1073-296d18.1	83	32.838	ENSNGAG00000023968	Parp10	85	33.962	Nannospalax_galili
ENSGACG00000008798	si:ch1073-296d18.1	81	82.407	ENSNBRG00000000940	si:ch1073-296d18.1	78	82.407	Neolamprologus_brichardi
ENSGACG00000008798	si:ch1073-296d18.1	82	32.567	ENSNLEG00000002423	PARP10	79	33.333	Nomascus_leucogenys
ENSGACG00000008798	si:ch1073-296d18.1	65	49.677	ENSMEUG00000001906	-	70	49.677	Notamacropus_eugenii
ENSGACG00000008798	si:ch1073-296d18.1	63	44.565	ENSOPRG00000015616	-	65	36.842	Ochotona_princeps
ENSGACG00000008798	si:ch1073-296d18.1	81	33.049	ENSODEG00000014276	PARP10	84	33.049	Octodon_degus
ENSGACG00000008798	si:ch1073-296d18.1	91	68.371	ENSONIG00000007669	si:ch1073-296d18.1	97	68.421	Oreochromis_niloticus
ENSGACG00000008798	si:ch1073-296d18.1	70	35.677	ENSOANG00000013123	-	94	33.544	Ornithorhynchus_anatinus
ENSGACG00000008798	si:ch1073-296d18.1	80	77.315	ENSORLG00015010006	si:ch1073-296d18.1	77	77.315	Oryzias_latipes_hsok
ENSGACG00000008798	si:ch1073-296d18.1	83	73.729	ENSOMEG00000011731	si:ch1073-296d18.1	78	72.881	Oryzias_melastigma
ENSGACG00000008798	si:ch1073-296d18.1	83	32.877	ENSOGAG00000033747	PARP10	82	33.162	Otolemur_garnettii
ENSGACG00000008798	si:ch1073-296d18.1	82	33.585	ENSOARG00000015581	PARP10	85	35.094	Ovis_aries
ENSGACG00000008798	si:ch1073-296d18.1	84	32.740	ENSPPAG00000041157	PARP10	82	33.105	Pan_paniscus
ENSGACG00000008798	si:ch1073-296d18.1	84	32.646	ENSPTRG00000043606	PARP10	82	33.105	Pan_troglodytes
ENSGACG00000008798	si:ch1073-296d18.1	82	33.563	ENSPANG00000023348	PARP10	80	33.390	Papio_anubis
ENSGACG00000008798	si:ch1073-296d18.1	91	80.556	ENSPFOG00000013067	si:ch1073-296d18.1	80	80.556	Poecilia_formosa
ENSGACG00000008798	si:ch1073-296d18.1	69	60.217	ENSPLAG00000022710	-	95	60.217	Poecilia_latipinna
ENSGACG00000008798	si:ch1073-296d18.1	69	60.572	ENSPMEG00000019504	-	95	60.572	Poecilia_mexicana
ENSGACG00000008798	si:ch1073-296d18.1	85	32.740	ENSPPYG00000018955	PARP10	87	33.445	Pongo_abelii
ENSGACG00000008798	si:ch1073-296d18.1	70	37.143	ENSPCAG00000001115	PARP10	84	37.143	Procavia_capensis
ENSGACG00000008798	si:ch1073-296d18.1	83	32.619	ENSPCOG00000028616	PARP10	83	33.333	Propithecus_coquereli
ENSGACG00000008798	si:ch1073-296d18.1	83	30.627	ENSPVAG00000006369	PARP10	89	32.509	Pteropus_vampyrus
ENSGACG00000008798	si:ch1073-296d18.1	57	77.551	ENSPNYG00000005086	-	85	70.455	Pundamilia_nyererei
ENSGACG00000008798	si:ch1073-296d18.1	85	70.466	ENSPNAG00000024484	si:ch1073-296d18.1	72	70.466	Pygocentrus_nattereri
ENSGACG00000008798	si:ch1073-296d18.1	83	33.391	ENSRNOG00000004361	Parp10	85	33.508	Rattus_norvegicus
ENSGACG00000008798	si:ch1073-296d18.1	81	33.619	ENSRBIG00000040506	PARP10	80	33.619	Rhinopithecus_bieti
ENSGACG00000008798	si:ch1073-296d18.1	81	33.448	ENSRROG00000039086	PARP10	78	33.448	Rhinopithecus_roxellana
ENSGACG00000008798	si:ch1073-296d18.1	84	32.066	ENSSBOG00000008301	PARP10	86	33.106	Saimiri_boliviensis_boliviensis
ENSGACG00000008798	si:ch1073-296d18.1	67	37.785	ENSSHAG00000002568	-	91	30.935	Sarcophilus_harrisii
ENSGACG00000008798	si:ch1073-296d18.1	54	90.256	ENSSLDG00000003545	-	87	58.494	Seriola_lalandi_dorsalis
ENSGACG00000008798	si:ch1073-296d18.1	55	85.641	ENSSPAG00000005439	-	83	54.854	Stegastes_partitus
ENSGACG00000008798	si:ch1073-296d18.1	99	45.680	ENSTNIG00000014023	si:ch1073-296d18.1	91	52.500	Tetraodon_nigroviridis
ENSGACG00000008798	si:ch1073-296d18.1	82	32.677	ENSTTRG00000006314	PARP10	85	33.858	Tursiops_truncatus
ENSGACG00000008798	si:ch1073-296d18.1	69	58.887	ENSXCOG00000003615	-	100	55.521	Xiphophorus_couchianus
ENSGACG00000008798	si:ch1073-296d18.1	71	58.786	ENSXMAG00000025112	-	100	60.897	Xiphophorus_maculatus