EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000008979 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3326 bases
Position: chrgroupI:7963629-7966954
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000011863	DUF2465	PF10239.9	6.3e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000011887	-	1708	-	ENSGACP00000011863	351 (aa)	-	G3P2P0

Gene Model

Click here to download ENSGACG00000008979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000008979's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000008979	-	73	32.584	ENSGACG00000010534	fam98b	78	32.210

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000008979	-	69	31.008	ENSG00000130244	FAM98C	64	30.315	Homo_sapiens
ENSGACG00000008979	-	97	65.395	ENSAPOG00000014173	-	100	64.096	Acanthochromis_polyacanthus
ENSGACG00000008979	-	82	35.161	ENSAPOG00000011449	fam98b	73	34.416	Acanthochromis_polyacanthus
ENSGACG00000008979	-	73	31.408	ENSAMEG00000010326	FAM98C	64	31.518	Ailuropoda_melanoleuca
ENSGACG00000008979	-	82	35.065	ENSACIG00000015069	fam98b	71	34.641	Amphilophus_citrinellus
ENSGACG00000008979	-	100	68.750	ENSACIG00000002526	im:7138535	100	68.750	Amphilophus_citrinellus
ENSGACG00000008979	-	82	33.550	ENSAOCG00000018313	fam98b	73	33.550	Amphiprion_ocellaris
ENSGACG00000008979	-	97	71.137	ENSAOCG00000002680	-	100	69.318	Amphiprion_ocellaris
ENSGACG00000008979	-	97	71.137	ENSAPEG00000013731	-	100	69.318	Amphiprion_percula
ENSGACG00000008979	-	82	33.766	ENSAPEG00000016398	fam98b	73	33.766	Amphiprion_percula
ENSGACG00000008979	-	98	69.477	ENSATEG00000010695	-	100	69.318	Anabas_testudineus
ENSGACG00000008979	-	82	35.065	ENSATEG00000011057	fam98b	74	35.714	Anabas_testudineus
ENSGACG00000008979	-	79	31.353	ENSACAG00000015917	FAM98B	68	32.399	Anolis_carolinensis
ENSGACG00000008979	-	82	33.876	ENSACAG00000002418	FAM98C	81	32.381	Anolis_carolinensis
ENSGACG00000008979	-	92	68.923	ENSACLG00000020293	-	93	68.466	Astatotilapia_calliptera
ENSGACG00000008979	-	96	58.754	ENSACLG00000018753	-	89	58.769	Astatotilapia_calliptera
ENSGACG00000008979	-	82	33.766	ENSACLG00000013626	fam98b	71	34.091	Astatotilapia_calliptera
ENSGACG00000008979	-	82	33.226	ENSAMXG00000014694	fam98b	69	32.803	Astyanax_mexicanus
ENSGACG00000008979	-	99	47.989	ENSAMXG00000042035	im:7138535	99	48.711	Astyanax_mexicanus
ENSGACG00000008979	-	78	30.169	ENSCJAG00000020980	FAM98B	65	30.449	Callithrix_jacchus
ENSGACG00000008979	-	73	30.882	ENSCAFG00000005919	FAM98C	55	30.709	Canis_familiaris
ENSGACG00000008979	-	73	30.657	ENSCAFG00020017778	FAM98C	79	38.938	Canis_lupus_dingo
ENSGACG00000008979	-	78	30.169	ENSCCAG00000037688	FAM98B	66	30.449	Cebus_capucinus
ENSGACG00000008979	-	50	33.511	ENSCATG00000023670	FAM98C	64	30.315	Cercocebus_atys
ENSGACG00000008979	-	78	30.169	ENSCLAG00000008407	FAM98B	70	30.892	Chinchilla_lanigera
ENSGACG00000008979	-	68	36.508	ENSCPBG00000008728	-	92	35.547	Chrysemys_picta_bellii
ENSGACG00000008979	-	78	30.201	ENSCPBG00000000742	FAM98B	69	30.159	Chrysemys_picta_bellii
ENSGACG00000008979	-	69	32.946	ENSCGRG00001013657	Fam98c	64	31.727	Cricetulus_griseus_chok1gshd
ENSGACG00000008979	-	78	31.081	ENSCGRG00001011148	Fam98b	76	31.529	Cricetulus_griseus_chok1gshd
ENSGACG00000008979	-	100	60.845	ENSCSEG00000009775	im:7138535	100	60.563	Cynoglossus_semilaevis
ENSGACG00000008979	-	82	33.550	ENSCSEG00000004831	fam98b	68	33.117	Cynoglossus_semilaevis
ENSGACG00000008979	-	78	34.483	ENSCVAG00000003248	fam98b	73	35.714	Cyprinodon_variegatus
ENSGACG00000008979	-	70	62.903	ENSCVAG00000007841	-	68	62.903	Cyprinodon_variegatus
ENSGACG00000008979	-	82	32.353	ENSDARG00000060068	fam98b	77	32.051	Danio_rerio
ENSGACG00000008979	-	100	47.486	ENSDARG00000057245	im:7138535	100	47.753	Danio_rerio
ENSGACG00000008979	-	78	30.169	ENSECAG00000006704	FAM98B	65	30.449	Equus_caballus
ENSGACG00000008979	-	55	32.367	ENSECAG00000021399	-	52	30.435	Equus_caballus
ENSGACG00000008979	-	99	55.966	ENSELUG00000019550	im:7138535	100	55.966	Esox_lucius
ENSGACG00000008979	-	82	32.248	ENSELUG00000006690	fam98b	73	31.922	Esox_lucius
ENSGACG00000008979	-	72	32.090	ENSFCAG00000000826	FAM98C	62	31.048	Felis_catus
ENSGACG00000008979	-	82	35.714	ENSFHEG00000020445	fam98b	73	35.390	Fundulus_heteroclitus
ENSGACG00000008979	-	91	65.528	ENSFHEG00000005365	-	100	62.712	Fundulus_heteroclitus
ENSGACG00000008979	-	86	54.125	ENSGMOG00000011664	-	99	53.474	Gadus_morhua
ENSGACG00000008979	-	70	30.916	ENSGALG00000009744	FAM98B	56	32.500	Gallus_gallus
ENSGACG00000008979	-	82	36.688	ENSGAFG00000019645	fam98b	73	36.039	Gambusia_affinis
ENSGACG00000008979	-	99	61.364	ENSGAFG00000010684	-	99	61.364	Gambusia_affinis
ENSGACG00000008979	-	78	30.537	ENSGAGG00000003971	FAM98B	71	31.410	Gopherus_agassizii
ENSGACG00000008979	-	89	35.000	ENSGAGG00000016487	FAM98C	85	34.494	Gopherus_agassizii
ENSGACG00000008979	-	69	31.008	ENSGGOG00000004470	FAM98C	64	30.315	Gorilla_gorilla
ENSGACG00000008979	-	70	68.826	ENSHBUG00000016825	-	80	68.826	Haplochromis_burtoni
ENSGACG00000008979	-	82	34.416	ENSHBUG00000017779	fam98b	71	34.416	Haplochromis_burtoni
ENSGACG00000008979	-	63	68.610	ENSHBUG00000018179	-	92	68.610	Haplochromis_burtoni
ENSGACG00000008979	-	78	30.640	ENSHGLG00000012275	FAM98B	67	30.892	Heterocephalus_glaber_female
ENSGACG00000008979	-	78	30.640	ENSHGLG00100000123	FAM98B	67	30.892	Heterocephalus_glaber_male
ENSGACG00000008979	-	100	58.239	ENSHCOG00000017023	im:7138535	100	57.670	Hippocampus_comes
ENSGACG00000008979	-	99	47.143	ENSIPUG00000024006	im:7138535	100	46.286	Ictalurus_punctatus
ENSGACG00000008979	-	74	35.531	ENSIPUG00000006869	fam98b	62	36.029	Ictalurus_punctatus
ENSGACG00000008979	-	78	31.633	ENSJJAG00000009039	Fam98b	77	32.051	Jaculus_jaculus
ENSGACG00000008979	-	91	65.625	ENSKMAG00000015503	im:7138535	99	63.248	Kryptolebias_marmoratus
ENSGACG00000008979	-	82	33.876	ENSKMAG00000011017	fam98b	74	33.225	Kryptolebias_marmoratus
ENSGACG00000008979	-	91	70.000	ENSLBEG00000026478	im:7138535	97	68.786	Labrus_bergylta
ENSGACG00000008979	-	82	34.539	ENSLBEG00000028307	fam98b	73	34.641	Labrus_bergylta
ENSGACG00000008979	-	82	34.405	ENSLOCG00000012257	fam98b	76	34.084	Lepisosteus_oculatus
ENSGACG00000008979	-	74	36.496	ENSLAFG00000020798	FAM98C	88	34.921	Loxodonta_africana
ENSGACG00000008979	-	50	33.511	ENSMNEG00000041959	FAM98C	64	30.315	Macaca_nemestrina
ENSGACG00000008979	-	82	34.740	ENSMAMG00000005919	fam98b	74	35.065	Mastacembelus_armatus
ENSGACG00000008979	-	100	66.477	ENSMAMG00000009488	im:7138535	100	65.625	Mastacembelus_armatus
ENSGACG00000008979	-	92	69.231	ENSMZEG00005015389	-	100	68.750	Maylandia_zebra
ENSGACG00000008979	-	86	66.667	ENSMZEG00005015997	-	99	66.364	Maylandia_zebra
ENSGACG00000008979	-	82	34.091	ENSMZEG00005002623	fam98b	71	34.091	Maylandia_zebra
ENSGACG00000008979	-	78	30.640	ENSMAUG00000021144	Fam98b	66	31.210	Mesocricetus_auratus
ENSGACG00000008979	-	78	30.640	ENSMOCG00000019785	Fam98b	68	31.210	Microtus_ochrogaster
ENSGACG00000008979	-	75	31.802	ENSMOCG00000018846	Fam98c	64	31.452	Microtus_ochrogaster
ENSGACG00000008979	-	100	70.141	ENSMMOG00000012054	im:7138535	100	68.927	Mola_mola
ENSGACG00000008979	-	78	30.169	ENSMODG00000001159	FAM98B	81	30.351	Monodelphis_domestica
ENSGACG00000008979	-	74	30.769	ENSMODG00000013175	-	96	30.403	Monodelphis_domestica
ENSGACG00000008979	-	98	70.058	ENSMALG00000005360	-	100	69.034	Monopterus_albus
ENSGACG00000008979	-	74	35.870	ENSMALG00000016464	fam98b	60	36.462	Monopterus_albus
ENSGACG00000008979	-	73	33.083	MGP_CAROLIEiJ_G0029473	Fam98c	85	39.167	Mus_caroli
ENSGACG00000008979	-	78	30.640	MGP_CAROLIEiJ_G0024110	Fam98b	65	31.210	Mus_caroli
ENSGACG00000008979	-	73	33.083	ENSMUSG00000030590	Fam98c	85	39.167	Mus_musculus
ENSGACG00000008979	-	78	30.640	ENSMUSG00000027349	Fam98b	65	31.210	Mus_musculus
ENSGACG00000008979	-	78	30.976	MGP_PahariEiJ_G0025553	Fam98b	65	31.529	Mus_pahari
ENSGACG00000008979	-	71	31.559	MGP_PahariEiJ_G0012707	Fam98c	84	39.167	Mus_pahari
ENSGACG00000008979	-	78	30.976	MGP_SPRETEiJ_G0025026	Fam98b	71	31.746	Mus_spretus
ENSGACG00000008979	-	50	38.462	MGP_SPRETEiJ_G0030569	Fam98c	54	33.548	Mus_spretus
ENSGACG00000008979	-	82	33.770	ENSNBRG00000023631	fam98b	69	34.098	Neolamprologus_brichardi
ENSGACG00000008979	-	92	64.923	ENSNBRG00000008282	-	100	64.773	Neolamprologus_brichardi
ENSGACG00000008979	-	99	66.387	ENSONIG00000006268	-	100	67.898	Oreochromis_niloticus
ENSGACG00000008979	-	82	34.091	ENSONIG00000001415	fam98b	69	34.416	Oreochromis_niloticus
ENSGACG00000008979	-	92	66.975	ENSONIG00000008152	-	99	65.909	Oreochromis_niloticus
ENSGACG00000008979	-	81	30.421	ENSOCUG00000001786	FAM98B	64	30.033	Oryctolagus_cuniculus
ENSGACG00000008979	-	100	60.563	ENSORLG00000007729	-	100	59.207	Oryzias_latipes
ENSGACG00000008979	-	78	34.021	ENSORLG00000012990	fam98b	77	34.304	Oryzias_latipes
ENSGACG00000008979	-	78	33.559	ENSORLG00020017980	fam98b	77	34.304	Oryzias_latipes_hni
ENSGACG00000008979	-	100	60.000	ENSORLG00020021618	-	100	58.640	Oryzias_latipes_hni
ENSGACG00000008979	-	100	60.000	ENSORLG00015002830	-	100	58.640	Oryzias_latipes_hsok
ENSGACG00000008979	-	96	62.722	ENSOMEG00000016172	im:7138535	100	61.080	Oryzias_melastigma
ENSGACG00000008979	-	72	32.090	ENSPPRG00000010257	FAM98C	62	30.159	Panthera_pardus
ENSGACG00000008979	-	69	31.008	ENSPTRG00000010929	FAM98C	64	30.315	Pan_troglodytes
ENSGACG00000008979	-	69	31.008	ENSPTRG00000049914	-	64	30.315	Pan_troglodytes
ENSGACG00000008979	-	50	33.511	ENSPANG00000007584	FAM98C	64	30.315	Papio_anubis
ENSGACG00000008979	-	91	47.826	ENSPKIG00000017343	im:7138535	94	47.546	Paramormyrops_kingsleyae
ENSGACG00000008979	-	87	51.290	ENSPMGG00000021240	-	95	49.552	Periophthalmus_magnuspinnatus
ENSGACG00000008979	-	78	30.847	ENSPCIG00000017154	FAM98B	59	31.210	Phascolarctos_cinereus
ENSGACG00000008979	-	91	62.305	ENSPFOG00000015605	im:7138535	98	60.734	Poecilia_formosa
ENSGACG00000008979	-	82	36.688	ENSPFOG00000014774	fam98b	73	36.039	Poecilia_formosa
ENSGACG00000008979	-	82	36.688	ENSPLAG00000020372	fam98b	73	36.039	Poecilia_latipinna
ENSGACG00000008979	-	100	60.734	ENSPLAG00000001683	im:7138535	100	60.734	Poecilia_latipinna
ENSGACG00000008979	-	82	36.688	ENSPMEG00000010960	fam98b	73	36.039	Poecilia_mexicana
ENSGACG00000008979	-	91	62.305	ENSPMEG00000014084	im:7138535	100	60.734	Poecilia_mexicana
ENSGACG00000008979	-	82	36.039	ENSPREG00000007461	fam98b	74	34.539	Poecilia_reticulata
ENSGACG00000008979	-	91	63.665	ENSPREG00000022142	-	100	61.690	Poecilia_reticulata
ENSGACG00000008979	-	76	30.961	ENSPCOG00000024380	FAM98C	65	31.496	Propithecus_coquereli
ENSGACG00000008979	-	82	34.426	ENSPNYG00000016866	fam98b	68	34.754	Pundamilia_nyererei
ENSGACG00000008979	-	62	61.290	ENSPNYG00000003712	-	79	64.948	Pundamilia_nyererei
ENSGACG00000008979	-	99	47.701	ENSPNAG00000019766	im:7138535	99	47.714	Pygocentrus_nattereri
ENSGACG00000008979	-	82	34.395	ENSPNAG00000008893	fam98b	72	33.758	Pygocentrus_nattereri
ENSGACG00000008979	-	73	33.948	ENSRNOG00000024036	Fam98c	64	31.727	Rattus_norvegicus
ENSGACG00000008979	-	68	30.952	ENSRBIG00000036368	-	78	30.116	Rhinopithecus_bieti
ENSGACG00000008979	-	69	30.233	ENSRROG00000017020	FAM98C	64	30.315	Rhinopithecus_roxellana
ENSGACG00000008979	-	75	31.295	ENSSHAG00000002208	-	97	30.935	Sarcophilus_harrisii
ENSGACG00000008979	-	78	31.186	ENSSHAG00000018457	FAM98B	64	31.310	Sarcophilus_harrisii
ENSGACG00000008979	-	97	49.300	ENSSFOG00015007019	im:7138535	99	48.641	Scleropages_formosus
ENSGACG00000008979	-	76	35.336	ENSSFOG00015010673	fam98b	77	33.981	Scleropages_formosus
ENSGACG00000008979	-	100	71.307	ENSSMAG00000016618	-	100	71.307	Scophthalmus_maximus
ENSGACG00000008979	-	82	34.091	ENSSMAG00000018911	fam98b	75	33.117	Scophthalmus_maximus
ENSGACG00000008979	-	82	32.792	ENSSDUG00000015289	fam98b	72	33.117	Seriola_dumerili
ENSGACG00000008979	-	98	70.930	ENSSDUG00000020558	im:7138535	99	69.429	Seriola_dumerili
ENSGACG00000008979	-	98	70.349	ENSSLDG00000016057	-	99	68.857	Seriola_lalandi_dorsalis
ENSGACG00000008979	-	82	35.065	ENSSLDG00000007822	fam98b	73	35.065	Seriola_lalandi_dorsalis
ENSGACG00000008979	-	97	72.595	ENSSPAG00000004694	im:7138535	100	71.023	Stegastes_partitus
ENSGACG00000008979	-	82	35.065	ENSSPAG00000015480	fam98b	72	35.390	Stegastes_partitus
ENSGACG00000008979	-	83	34.591	ENSTRUG00000013778	fam98b	77	34.076	Takifugu_rubripes
ENSGACG00000008979	-	96	61.243	ENSTRUG00000015519	im:7138535	100	61.254	Takifugu_rubripes
ENSGACG00000008979	-	64	31.169	ENSTNIG00000002436	-	88	30.992	Tetraodon_nigroviridis
ENSGACG00000008979	-	98	62.391	ENSTNIG00000019278	im:7138535	98	62.571	Tetraodon_nigroviridis
ENSGACG00000008979	-	86	33.642	ENSTNIG00000017243	fam98b	78	33.441	Tetraodon_nigroviridis
ENSGACG00000008979	-	73	31.022	ENSUAMG00000014001	FAM98C	64	31.518	Ursus_americanus
ENSGACG00000008979	-	74	32.117	ENSXETG00000002820	fam98a	64	32.117	Xenopus_tropicalis
ENSGACG00000008979	-	82	34.740	ENSXCOG00000000576	fam98b	73	34.416	Xiphophorus_couchianus
ENSGACG00000008979	-	91	63.975	ENSXCOG00000012756	im:7138535	100	62.254	Xiphophorus_couchianus
ENSGACG00000008979	-	82	35.275	ENSXMAG00000010344	fam98b	71	34.084	Xiphophorus_maculatus
ENSGACG00000008979	-	91	63.863	ENSXMAG00000008723	im:7138535	100	62.147	Xiphophorus_maculatus