EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGACG00000008982 (Gene tree)
Gene ID
-
Gene Symbol
scrt1b
Alias
zgc:113646
Full Name
scratch family zinc finger 1b
Gene Type
protein_coding
Species
Gasterosteus_aculeatus
Status
putative
Strand
Minus strand
Length
4279 bases
Position
chrgroupXX:10435091-10439369
Accession
ZDB-GENE-050327-72
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGACP00000011860zf-C2H2PF00096.264.6e-2614
ENSGACP00000011860zf-C2H2PF00096.264.6e-2624
ENSGACP00000011860zf-C2H2PF00096.264.6e-2634
ENSGACP00000011860zf-C2H2PF00096.264.6e-2644
ENSGACP00000011860zf-metPF12874.74.1e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGACT00000011884-828-ENSGACP00000011860275 (aa)-G3P2N7
Gene Model
Click here to download ENSGACG00000008982's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000008982's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGACG00000008982scrt1b5235.338ENSGACG00000010352si:ch211-207i20.26135.338
ENSGACG00000008982scrt1b5641.429ENSGACG00000018816-9941.429
ENSGACG00000008982scrt1b5935.484ENSGACG00000014395-9935.484
ENSGACG00000008982scrt1b5446.774ENSGACG00000001358-10046.774
ENSGACG00000008982scrt1b5539.450ENSGACG00000015729-9139.450
ENSGACG00000008982scrt1b5540.230ENSGACG00000010384-9940.230
ENSGACG00000008982scrt1b6735.338ENSGACG00000005239-9035.338
ENSGACG00000008982scrt1b5939.744ENSGACG00000011187zbtb485139.744
ENSGACG00000008982scrt1b6336.634ENSGACG00000008733znf6468936.634
ENSGACG00000008982scrt1b5238.400ENSGACG00000005742-7138.400
ENSGACG00000008982scrt1b5943.704ENSGACG00000012611-9043.704
ENSGACG00000008982scrt1b6043.038ENSGACG00000004478-9743.038
ENSGACG00000008982scrt1b5336.296ENSGACG00000019863-8436.296
ENSGACG00000008982scrt1b7239.423ENSGACG00000019550-9645.238
ENSGACG00000008982scrt1b9972.109ENSGACG00000004072-9972.109
ENSGACG00000008982scrt1b6040.146ENSGACG00000013652-9940.146
ENSGACG00000008982scrt1b5343.269ENSGACG00000013659-9043.269
ENSGACG00000008982scrt1b5342.857ENSGACG00000001371-9742.857
ENSGACG00000008982scrt1b6237.121ENSGACG00000001377-8137.121
ENSGACG00000008982scrt1b6040.625ENSGACG00000004761-10040.625
ENSGACG00000008982scrt1b6038.849ENSGACG00000004765-9938.849
ENSGACG00000008982scrt1b5737.584ENSGACG00000001523-9737.584
ENSGACG00000008982scrt1b5340.323ENSGACG00000013660-9940.323
ENSGACG00000008982scrt1b8543.529ENSGACG00000005553znf2369545.333
ENSGACG00000008982scrt1b5634.328ENSGACG00000018088si:dkey-7i4.59933.824
ENSGACG00000008982scrt1b5334.752ENSGACG00000003372zbtb47b5534.752
ENSGACG00000008982scrt1b5342.105ENSGACG00000015674gfi1aa5142.105
ENSGACG00000008982scrt1b5353.691ENSGACG00000017935snai29839.259
ENSGACG00000008982scrt1b5946.512ENSGACG00000010051-8247.945
ENSGACG00000008982scrt1b6538.235ENSGACG00000010393-9938.235
ENSGACG00000008982scrt1b5238.824ENSGACG00000006283-7438.824
ENSGACG00000008982scrt1b6636.364ENSGACG00000012517-9936.364
ENSGACG00000008982scrt1b7634.091ENSGACG00000003258znf319b7134.091
ENSGACG00000008982scrt1b8034.146ENSGACG00000010711zbtb16b5234.146
ENSGACG00000008982scrt1b6046.429ENSGACG00000004549-9940.441
ENSGACG00000008982scrt1b5437.086ENSGACG00000012415GZF19436.111
ENSGACG00000008982scrt1b9439.241ENSGACG00000001618-9832.975
ENSGACG00000008982scrt1b5533.613ENSGACG00000016248-9833.613
ENSGACG00000008982scrt1b7738.281ENSGACG00000009449znf5265938.281
ENSGACG00000008982scrt1b5431.792ENSGACG00000014840maza6831.792
ENSGACG00000008982scrt1b5235.135ENSGACG00000018415-9935.135
ENSGACG00000008982scrt1b5639.850ENSGACG00000010515ZNF6289939.850
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGACG00000008982scrt1b9667.636ENSAPOG00000003680scrt29667.636Acanthochromis_polyacanthus
ENSGACG00000008982scrt1b9976.056ENSAPOG00000015197-9976.056Acanthochromis_polyacanthus
ENSGACG00000008982scrt1b9994.265ENSAPOG00000009279scrt1b9994.265Acanthochromis_polyacanthus
ENSGACG00000008982scrt1b9973.826ENSACIG00000006586-9973.826Amphilophus_citrinellus
ENSGACG00000008982scrt1b9990.323ENSACIG00000013613scrt1b9990.323Amphilophus_citrinellus
ENSGACG00000008982scrt1b9666.182ENSACIG00000012604scrt29666.182Amphilophus_citrinellus
ENSGACG00000008982scrt1b8863.241ENSACIG00000001296-9656.333Amphilophus_citrinellus
ENSGACG00000008982scrt1b9667.636ENSAOCG00000021557scrt29667.636Amphiprion_ocellaris
ENSGACG00000008982scrt1b9974.497ENSAOCG00000023304-9974.497Amphiprion_ocellaris
ENSGACG00000008982scrt1b9994.265ENSAOCG00000003910scrt1b9994.265Amphiprion_ocellaris
ENSGACG00000008982scrt1b9667.636ENSAPEG00000022558scrt29667.636Amphiprion_percula
ENSGACG00000008982scrt1b9994.624ENSAPEG00000000869scrt1b9994.624Amphiprion_percula
ENSGACG00000008982scrt1b9974.497ENSAPEG00000005677-9974.497Amphiprion_percula
ENSGACG00000008982scrt1b9992.473ENSATEG00000002302scrt1b9992.473Anabas_testudineus
ENSGACG00000008982scrt1b9652.885ENSATEG00000003195-9652.885Anabas_testudineus
ENSGACG00000008982scrt1b9974.648ENSATEG00000011660-9974.648Anabas_testudineus
ENSGACG00000008982scrt1b9662.987ENSATEG00000023998scrt29662.987Anabas_testudineus
ENSGACG00000008982scrt1b7776.526ENSACAG00000016109SCRT29576.526Anolis_carolinensis
ENSGACG00000008982scrt1b9993.907ENSACLG00000007162scrt1b9993.907Astatotilapia_calliptera
ENSGACG00000008982scrt1b9971.096ENSACLG00000012046-9971.096Astatotilapia_calliptera
ENSGACG00000008982scrt1b9879.348ENSAMXG00000042624SCRT19979.348Astyanax_mexicanus
ENSGACG00000008982scrt1b8474.370ENSAMXG00000034158scrt28674.370Astyanax_mexicanus
ENSGACG00000008982scrt1b9981.720ENSAMXG00000038085scrt1a9981.720Astyanax_mexicanus
ENSGACG00000008982scrt1b5961.111WBGene00000468ces-16060.366Caenorhabditis_elegans
ENSGACG00000008982scrt1b7368.812ENSCPBG00000027613SCRT28068.812Chrysemys_picta_bellii
ENSGACG00000008982scrt1b9980.576ENSCPBG00000018899SCRT19980.576Chrysemys_picta_bellii
ENSGACG00000008982scrt1b9873.898ENSCSEG00000014892-9873.898Cynoglossus_semilaevis
ENSGACG00000008982scrt1b9663.576ENSCSEG00000021542scrt29663.576Cynoglossus_semilaevis
ENSGACG00000008982scrt1b9991.756ENSCSEG00000008596scrt1b9991.756Cynoglossus_semilaevis
ENSGACG00000008982scrt1b9974.497ENSCVAG00000003190-9974.497Cyprinodon_variegatus
ENSGACG00000008982scrt1b9662.338ENSCVAG00000021038scrt29662.338Cyprinodon_variegatus
ENSGACG00000008982scrt1b9992.832ENSCVAG00000009561scrt1b9992.832Cyprinodon_variegatus
ENSGACG00000008982scrt1b9984.588ENSDARG00000100821scrt1a9984.588Danio_rerio
ENSGACG00000008982scrt1b9983.513ENSDARG00000040214scrt1b9983.513Danio_rerio
ENSGACG00000008982scrt1b9664.765ENSELUG00000023883scrt29664.765Esox_lucius
ENSGACG00000008982scrt1b9985.870ENSELUG00000005435scrt1b9885.870Esox_lucius
ENSGACG00000008982scrt1b9985.252ENSELUG00000022228scrt1a9985.252Esox_lucius
ENSGACG00000008982scrt1b8472.294ENSFALG00000005718SCRT29672.294Ficedula_albicollis
ENSGACG00000008982scrt1b9659.108ENSFDAG00000008733SCRT19659.108Fukomys_damarensis
ENSGACG00000008982scrt1b9669.818ENSFHEG00000005732scrt29669.818Fundulus_heteroclitus
ENSGACG00000008982scrt1b9994.265ENSFHEG00000014820scrt1b9994.265Fundulus_heteroclitus
ENSGACG00000008982scrt1b9974.832ENSFHEG00000009794-9974.832Fundulus_heteroclitus
ENSGACG00000008982scrt1b9992.727ENSGMOG00000000629scrt1b10092.727Gadus_morhua
ENSGACG00000008982scrt1b9659.091ENSGMOG00000019519scrt29559.091Gadus_morhua
ENSGACG00000008982scrt1b8470.870ENSGALG00000028912SCRT28270.870Gallus_gallus
ENSGACG00000008982scrt1b9993.190ENSGAFG00000007636scrt1b9993.190Gambusia_affinis
ENSGACG00000008982scrt1b9665.424ENSGAFG00000003093scrt29665.424Gambusia_affinis
ENSGACG00000008982scrt1b9975.714ENSGAFG00000009650-9975.714Gambusia_affinis
ENSGACG00000008982scrt1b9981.522ENSGAGG00000011736SCRT19981.522Gopherus_agassizii
ENSGACG00000008982scrt1b6780.000ENSGAGG00000020760-7180.000Gopherus_agassizii
ENSGACG00000008982scrt1b9664.207ENSGAGG00000020761SCRT29664.207Gopherus_agassizii
ENSGACG00000008982scrt1b9993.907ENSHBUG00000016621scrt1b9993.907Haplochromis_burtoni
ENSGACG00000008982scrt1b9667.636ENSHBUG00000012492scrt29667.636Haplochromis_burtoni
ENSGACG00000008982scrt1b9973.490ENSHBUG00000019101-9973.490Haplochromis_burtoni
ENSGACG00000008982scrt1b9991.039ENSHCOG00000016704scrt1b9991.039Hippocampus_comes
ENSGACG00000008982scrt1b9966.667ENSHCOG00000016179-9967.014Hippocampus_comes
ENSGACG00000008982scrt1b9664.261ENSHCOG00000008116scrt29664.261Hippocampus_comes
ENSGACG00000008982scrt1b9982.671ENSIPUG00000004551scrt1a9982.671Ictalurus_punctatus
ENSGACG00000008982scrt1b9876.190ENSIPUG00000005547-9976.190Ictalurus_punctatus
ENSGACG00000008982scrt1b5185.106ENSSTOG00000032944SCRT28480.892Ictidomys_tridecemlineatus
ENSGACG00000008982scrt1b9972.054ENSKMAG00000009489-9973.737Kryptolebias_marmoratus
ENSGACG00000008982scrt1b9993.548ENSKMAG00000005484scrt1b9993.548Kryptolebias_marmoratus
ENSGACG00000008982scrt1b9662.662ENSKMAG00000018087scrt29662.662Kryptolebias_marmoratus
ENSGACG00000008982scrt1b9662.460ENSLBEG00000015419scrt29662.460Labrus_bergylta
ENSGACG00000008982scrt1b9971.864ENSLBEG00000023388-9973.311Labrus_bergylta
ENSGACG00000008982scrt1b9982.374ENSLACG00000003588SCRT19982.374Latimeria_chalumnae
ENSGACG00000008982scrt1b9652.443ENSLOCG00000002246scrt29752.443Lepisosteus_oculatus
ENSGACG00000008982scrt1b9986.022ENSLOCG00000007573scrt1b9986.022Lepisosteus_oculatus
ENSGACG00000008982scrt1b9662.338ENSMAMG00000001291scrt29662.338Mastacembelus_armatus
ENSGACG00000008982scrt1b9993.190ENSMAMG00000011698scrt1b9993.190Mastacembelus_armatus
ENSGACG00000008982scrt1b9667.636ENSMZEG00005026445scrt29667.636Maylandia_zebra
ENSGACG00000008982scrt1b9993.907ENSMZEG00005005627scrt1b9993.907Maylandia_zebra
ENSGACG00000008982scrt1b9973.490ENSMZEG00005026702-9973.490Maylandia_zebra
ENSGACG00000008982scrt1b8470.870ENSMGAG00000016579SCRT29670.870Meleagris_gallopavo
ENSGACG00000008982scrt1b9662.951ENSMMOG00000009272scrt29663.607Mola_mola
ENSGACG00000008982scrt1b9974.161ENSMMOG00000018345-9974.161Mola_mola
ENSGACG00000008982scrt1b9992.115ENSMMOG00000003327scrt1b9992.115Mola_mola
ENSGACG00000008982scrt1b9666.667ENSMALG00000013656scrt29666.667Monopterus_albus
ENSGACG00000008982scrt1b9993.190ENSMALG00000012704scrt1b9993.190Monopterus_albus
ENSGACG00000008982scrt1b5185.106ENSNGAG00000020815Scrt27382.119Nannospalax_galili
ENSGACG00000008982scrt1b9667.273ENSNBRG00000007221scrt29667.273Neolamprologus_brichardi
ENSGACG00000008982scrt1b9988.889ENSNBRG00000013983scrt1b9988.889Neolamprologus_brichardi
ENSGACG00000008982scrt1b9973.154ENSNBRG00000014882-9973.154Neolamprologus_brichardi
ENSGACG00000008982scrt1b9660.507ENSONIG00000003152-9660.507Oreochromis_niloticus
ENSGACG00000008982scrt1b9670.395ENSONIG00000019809-9970.395Oreochromis_niloticus
ENSGACG00000008982scrt1b9993.190ENSONIG00000006007scrt1b9993.190Oreochromis_niloticus
ENSGACG00000008982scrt1b9662.338ENSONIG00000016758scrt29662.338Oreochromis_niloticus
ENSGACG00000008982scrt1b9662.662ENSORLG00000024051scrt29662.662Oryzias_latipes
ENSGACG00000008982scrt1b9992.473ENSORLG00000025651scrt1b9992.473Oryzias_latipes
ENSGACG00000008982scrt1b9972.575ENSORLG00000022825-9972.575Oryzias_latipes
ENSGACG00000008982scrt1b9662.662ENSORLG00020011478scrt29662.662Oryzias_latipes_hni
ENSGACG00000008982scrt1b9992.473ENSORLG00020012967scrt1b9992.473Oryzias_latipes_hni
ENSGACG00000008982scrt1b9992.473ENSORLG00015019165scrt1b9992.473Oryzias_latipes_hsok
ENSGACG00000008982scrt1b9662.662ENSORLG00015005524scrt29662.662Oryzias_latipes_hsok
ENSGACG00000008982scrt1b9972.910ENSORLG00015010104-9972.910Oryzias_latipes_hsok
ENSGACG00000008982scrt1b9974.411ENSOMEG00000000286-9974.411Oryzias_melastigma
ENSGACG00000008982scrt1b9662.987ENSOMEG00000002661scrt29662.987Oryzias_melastigma
ENSGACG00000008982scrt1b9992.473ENSOMEG00000003925scrt1b9992.473Oryzias_melastigma
ENSGACG00000008982scrt1b9984.229ENSPKIG00000022303SCRT19984.229Paramormyrops_kingsleyae
ENSGACG00000008982scrt1b9984.229ENSPKIG00000020085scrt1a9984.229Paramormyrops_kingsleyae
ENSGACG00000008982scrt1b9988.172ENSPMGG00000002260scrt1b9988.172Periophthalmus_magnuspinnatus
ENSGACG00000008982scrt1b9668.498ENSPMGG00000016561scrt29668.498Periophthalmus_magnuspinnatus
ENSGACG00000008982scrt1b9972.165ENSPMGG00000021402-9972.165Periophthalmus_magnuspinnatus
ENSGACG00000008982scrt1b9662.662ENSPFOG00000007738scrt29662.662Poecilia_formosa
ENSGACG00000008982scrt1b9993.190ENSPFOG00000017719scrt1b9993.190Poecilia_formosa
ENSGACG00000008982scrt1b9974.576ENSPFOG00000005616-9974.576Poecilia_formosa
ENSGACG00000008982scrt1b9669.928ENSPLAG00000005765scrt29669.928Poecilia_latipinna
ENSGACG00000008982scrt1b9974.576ENSPLAG00000011718-9974.576Poecilia_latipinna
ENSGACG00000008982scrt1b9993.190ENSPLAG00000009876scrt1b9993.190Poecilia_latipinna
ENSGACG00000008982scrt1b9993.190ENSPMEG00000013274scrt1b9993.190Poecilia_mexicana
ENSGACG00000008982scrt1b9669.928ENSPMEG00000001538scrt29669.928Poecilia_mexicana
ENSGACG00000008982scrt1b9974.576ENSPMEG00000011706-9974.576Poecilia_mexicana
ENSGACG00000008982scrt1b9993.190ENSPREG00000018985scrt1b9993.190Poecilia_reticulata
ENSGACG00000008982scrt1b9662.662ENSPREG00000001147scrt29662.662Poecilia_reticulata
ENSGACG00000008982scrt1b9973.898ENSPREG00000012166-9973.898Poecilia_reticulata
ENSGACG00000008982scrt1b9973.490ENSPNYG00000008865-9973.490Pundamilia_nyererei
ENSGACG00000008982scrt1b9667.636ENSPNYG00000013109scrt29667.636Pundamilia_nyererei
ENSGACG00000008982scrt1b9993.907ENSPNYG00000017733scrt1b9993.907Pundamilia_nyererei
ENSGACG00000008982scrt1b9881.455ENSPNAG00000027880-9981.455Pygocentrus_nattereri
ENSGACG00000008982scrt1b9982.796ENSPNAG00000017415scrt1a9982.796Pygocentrus_nattereri
ENSGACG00000008982scrt1b9983.871ENSSFOG00015001195SCRT19983.871Scleropages_formosus
ENSGACG00000008982scrt1b9972.333ENSSMAG00000005122-9972.333Scophthalmus_maximus
ENSGACG00000008982scrt1b9991.367ENSSMAG00000019207scrt1b9991.367Scophthalmus_maximus
ENSGACG00000008982scrt1b9993.907ENSSDUG00000007752scrt1b9993.907Seriola_dumerili
ENSGACG00000008982scrt1b9764.214ENSSDUG00000001637scrt29664.214Seriola_dumerili
ENSGACG00000008982scrt1b9974.497ENSSDUG00000013215-9974.497Seriola_dumerili
ENSGACG00000008982scrt1b9662.338ENSSLDG00000013565scrt29662.338Seriola_lalandi_dorsalis
ENSGACG00000008982scrt1b9974.497ENSSLDG00000016454-9974.497Seriola_lalandi_dorsalis
ENSGACG00000008982scrt1b9993.907ENSSLDG00000017166scrt1b9993.907Seriola_lalandi_dorsalis
ENSGACG00000008982scrt1b9665.056ENSSPUG00000018637SCRT29665.056Sphenodon_punctatus
ENSGACG00000008982scrt1b9668.000ENSSPAG00000014018scrt29668.000Stegastes_partitus
ENSGACG00000008982scrt1b9973.154ENSSPAG00000006788-9974.832Stegastes_partitus
ENSGACG00000008982scrt1b9993.907ENSSPAG00000002200scrt1b9993.907Stegastes_partitus
ENSGACG00000008982scrt1b8472.174ENSTGUG00000006801SCRT29972.174Taeniopygia_guttata
ENSGACG00000008982scrt1b9892.701ENSTRUG00000011637scrt1b9992.701Takifugu_rubripes
ENSGACG00000008982scrt1b9666.438ENSTRUG00000007620scrt29666.438Takifugu_rubripes
ENSGACG00000008982scrt1b8778.512ENSTRUG00000019558-8078.512Takifugu_rubripes
ENSGACG00000008982scrt1b9973.649ENSTRUG00000012719-9973.649Takifugu_rubripes
ENSGACG00000008982scrt1b9992.115ENSTNIG00000018384scrt1b9992.115Tetraodon_nigroviridis
ENSGACG00000008982scrt1b9669.424ENSTNIG00000012473scrt29669.424Tetraodon_nigroviridis
ENSGACG00000008982scrt1b9992.832ENSXCOG00000019675scrt1b9992.832Xiphophorus_couchianus
ENSGACG00000008982scrt1b9665.763ENSXCOG00000014367scrt29665.763Xiphophorus_couchianus
ENSGACG00000008982scrt1b9974.286ENSXCOG00000019861-9974.286Xiphophorus_couchianus
ENSGACG00000008982scrt1b9992.832ENSXMAG00000027885scrt1b9992.832Xiphophorus_maculatus
ENSGACG00000008982scrt1b9662.987ENSXMAG00000028567scrt29662.987Xiphophorus_maculatus
ENSGACG00000008982scrt1b9974.237ENSXMAG00000015353-9974.237Xiphophorus_maculatus

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