EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000009128 (Gene tree)
Gene ID: -
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 9881 bases
Position: chrgroupXX:10704434-10714314
Accession: ZDB-GENE-060810-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000012044	ResIII	PF04851.15	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000012071	-	903	-	ENSGACP00000012047	301 (aa)	-	G3P374
ENSGACT00000012068	-	2760	-	ENSGACP00000012044	919 (aa)	-	G3P371

Gene Model

Click here to download ENSGACG00000009128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000009128's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000009128	rad54b	54	32.621	ENSGACG00000014042	chd1l	87	32.621
ENSGACG00000009128	rad54b	50	31.936	ENSGACG00000001096	ercc6l	84	31.936
ENSGACG00000009128	rad54b	63	46.441	ENSGACG00000003111	rad54l	76	46.010

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000009128	rad54b	99	54.770	ENSG00000197275	RAD54B	99	54.770	Homo_sapiens
ENSGACG00000009128	rad54b	79	58.266	ENSG00000265817	FSBP	99	58.266	Homo_sapiens
ENSGACG00000009128	rad54b	99	55.508	ENSAMEG00000005834	-	99	55.508	Ailuropoda_melanoleuca
ENSGACG00000009128	rad54b	99	78.299	ENSACIG00000013005	rad54b	99	78.299	Amphilophus_citrinellus
ENSGACG00000009128	rad54b	99	78.879	ENSAOCG00000008523	rad54b	99	78.879	Amphiprion_ocellaris
ENSGACG00000009128	rad54b	99	76.170	ENSAPEG00000001673	rad54b	99	76.170	Amphiprion_percula
ENSGACG00000009128	rad54b	99	77.861	ENSATEG00000001527	rad54b	99	78.182	Anabas_testudineus
ENSGACG00000009128	rad54b	100	57.281	ENSAPLG00000014366	-	99	57.281	Anas_platyrhynchos
ENSGACG00000009128	rad54b	86	59.949	ENSACAG00000003671	-	98	59.949	Anolis_carolinensis
ENSGACG00000009128	rad54b	70	60.372	ENSANAG00000019528	-	99	60.372	Aotus_nancymaae
ENSGACG00000009128	rad54b	99	79.171	ENSACLG00000007826	rad54b	99	79.389	Astatotilapia_calliptera
ENSGACG00000009128	rad54b	85	67.427	ENSAMXG00000039985	rad54b	95	67.085	Astyanax_mexicanus
ENSGACG00000009128	rad54b	99	55.508	ENSBTAG00000000632	RAD54B	99	55.508	Bos_taurus
ENSGACG00000009128	rad54b	77	36.849	WBGene00013792	Y116A8C.13	86	35.854	Caenorhabditis_elegans
ENSGACG00000009128	rad54b	99	55.091	ENSCJAG00000000080	-	99	58.808	Callithrix_jacchus
ENSGACG00000009128	rad54b	99	55.914	ENSCAFG00000009179	RAD54B	99	55.927	Canis_familiaris
ENSGACG00000009128	rad54b	99	56.022	ENSCAFG00020012084	-	99	56.034	Canis_lupus_dingo
ENSGACG00000009128	rad54b	99	55.676	ENSCHIG00000008230	-	99	55.676	Capra_hircus
ENSGACG00000009128	rad54b	99	55.128	ENSTSYG00000013234	-	99	55.128	Carlito_syrichta
ENSGACG00000009128	rad54b	99	54.113	ENSCPOG00000011643	-	99	54.113	Cavia_porcellus
ENSGACG00000009128	rad54b	99	54.908	ENSCCAG00000011754	-	99	58.424	Cebus_capucinus
ENSGACG00000009128	rad54b	99	54.800	ENSCATG00000030661	-	99	58.752	Cercocebus_atys
ENSGACG00000009128	rad54b	99	53.863	ENSCLAG00000010476	-	99	53.863	Chinchilla_lanigera
ENSGACG00000009128	rad54b	99	54.800	ENSCSAG00000012712	-	99	54.800	Chlorocebus_sabaeus
ENSGACG00000009128	rad54b	100	57.173	ENSCPBG00000003204	-	98	58.789	Chrysemys_picta_bellii
ENSGACG00000009128	rad54b	99	55.124	ENSCANG00000017939	-	99	58.887	Colobus_angolensis_palliatus
ENSGACG00000009128	rad54b	100	53.622	ENSCGRG00001020184	Rad54b	99	53.622	Cricetulus_griseus_chok1gshd
ENSGACG00000009128	rad54b	100	52.865	ENSCGRG00000016752	Rad54b	99	52.865	Cricetulus_griseus_crigri
ENSGACG00000009128	rad54b	95	78.349	ENSCSEG00000001601	rad54b	99	78.349	Cynoglossus_semilaevis
ENSGACG00000009128	rad54b	99	75.922	ENSCVAG00000009200	rad54b	99	75.922	Cyprinodon_variegatus
ENSGACG00000009128	rad54b	99	62.297	ENSDARG00000092134	rad54b	99	69.470	Danio_rerio
ENSGACG00000009128	rad54b	99	56.061	ENSDNOG00000015535	-	99	56.061	Dasypus_novemcinctus
ENSGACG00000009128	rad54b	99	53.739	ENSDORG00000002492	Rad54b	99	53.739	Dipodomys_ordii
ENSGACG00000009128	rad54b	87	57.108	ENSETEG00000010605	-	100	57.108	Echinops_telfairi
ENSGACG00000009128	rad54b	99	46.398	ENSEBUG00000009104	rad54b	84	50.500	Eptatretus_burgeri
ENSGACG00000009128	rad54b	89	57.762	ENSEASG00005004021	-	92	57.762	Equus_asinus_asinus
ENSGACG00000009128	rad54b	99	55.424	ENSECAG00000021949	-	99	55.424	Equus_caballus
ENSGACG00000009128	rad54b	71	52.761	ENSEEUG00000008056	-	72	52.761	Erinaceus_europaeus
ENSGACG00000009128	rad54b	99	70.913	ENSELUG00000009287	rad54b	99	71.413	Esox_lucius
ENSGACG00000009128	rad54b	99	55.184	ENSFCAG00000015513	-	99	59.647	Felis_catus
ENSGACG00000009128	rad54b	100	56.051	ENSFALG00000005467	-	99	56.051	Ficedula_albicollis
ENSGACG00000009128	rad54b	99	54.477	ENSFDAG00000020541	-	100	54.477	Fukomys_damarensis
ENSGACG00000009128	rad54b	90	77.578	ENSFHEG00000014382	rad54b	91	77.578	Fundulus_heteroclitus
ENSGACG00000009128	rad54b	86	81.669	ENSGMOG00000014774	rad54b	98	81.669	Gadus_morhua
ENSGACG00000009128	rad54b	100	56.852	ENSGALG00000043597	RAD54B	99	56.852	Gallus_gallus
ENSGACG00000009128	rad54b	93	82.071	ENSGAFG00000007901	rad54b	99	82.071	Gambusia_affinis
ENSGACG00000009128	rad54b	100	56.944	ENSGAGG00000018747	-	99	56.944	Gopherus_agassizii
ENSGACG00000009128	rad54b	99	54.731	ENSGGOG00000023516	-	99	54.731	Gorilla_gorilla
ENSGACG00000009128	rad54b	99	78.762	ENSHBUG00000016017	rad54b	99	78.762	Haplochromis_burtoni
ENSGACG00000009128	rad54b	99	53.978	ENSHGLG00000008263	RAD54B	98	53.978	Heterocephalus_glaber_female
ENSGACG00000009128	rad54b	99	53.312	ENSHGLG00100008108	-	98	53.312	Heterocephalus_glaber_male
ENSGACG00000009128	rad54b	100	72.688	ENSHCOG00000004764	rad54b	98	76.238	Hippocampus_comes
ENSGACG00000009128	rad54b	99	60.293	ENSIPUG00000018531	rad54b	99	60.293	Ictalurus_punctatus
ENSGACG00000009128	rad54b	100	52.859	ENSSTOG00000010791	-	99	52.859	Ictidomys_tridecemlineatus
ENSGACG00000009128	rad54b	99	54.028	ENSJJAG00000010314	Rad54b	99	54.028	Jaculus_jaculus
ENSGACG00000009128	rad54b	85	80.253	ENSKMAG00000004744	rad54b	91	80.253	Kryptolebias_marmoratus
ENSGACG00000009128	rad54b	81	63.382	ENSLACG00000000859	-	100	63.382	Latimeria_chalumnae
ENSGACG00000009128	rad54b	99	62.876	ENSLOCG00000010100	rad54b	94	68.664	Lepisosteus_oculatus
ENSGACG00000009128	rad54b	88	56.916	ENSLAFG00000015315	-	99	56.671	Loxodonta_africana
ENSGACG00000009128	rad54b	99	54.908	ENSMFAG00000031629	-	99	58.752	Macaca_fascicularis
ENSGACG00000009128	rad54b	99	54.908	ENSMMUG00000005659	-	99	54.908	Macaca_mulatta
ENSGACG00000009128	rad54b	99	54.693	ENSMNEG00000016408	-	99	54.693	Macaca_nemestrina
ENSGACG00000009128	rad54b	99	55.016	ENSMLEG00000006946	-	99	54.898	Mandrillus_leucophaeus
ENSGACG00000009128	rad54b	99	76.432	ENSMAMG00000012269	rad54b	99	76.432	Mastacembelus_armatus
ENSGACG00000009128	rad54b	99	78.762	ENSMZEG00005005281	rad54b	97	85.167	Maylandia_zebra
ENSGACG00000009128	rad54b	100	56.377	ENSMGAG00000012024	-	99	56.377	Meleagris_gallopavo
ENSGACG00000009128	rad54b	100	53.081	ENSMAUG00000013586	Rad54b	99	53.081	Mesocricetus_auratus
ENSGACG00000009128	rad54b	88	58.333	ENSMICG00000000754	-	92	58.333	Microcebus_murinus
ENSGACG00000009128	rad54b	100	52.796	ENSMOCG00000020035	Rad54b	99	52.897	Microtus_ochrogaster
ENSGACG00000009128	rad54b	99	76.056	ENSMMOG00000003394	rad54b	99	76.056	Mola_mola
ENSGACG00000009128	rad54b	88	57.598	ENSMODG00000007343	-	99	57.598	Monodelphis_domestica
ENSGACG00000009128	rad54b	70	84.137	ENSMALG00000001520	rad54b	99	84.137	Monopterus_albus
ENSGACG00000009128	rad54b	100	54.113	MGP_CAROLIEiJ_G0025810	Rad54b	99	54.113	Mus_caroli
ENSGACG00000009128	rad54b	100	53.556	ENSMUSG00000078773	Rad54b	99	53.556	Mus_musculus
ENSGACG00000009128	rad54b	100	53.614	MGP_PahariEiJ_G0023933	Rad54b	99	53.614	Mus_pahari
ENSGACG00000009128	rad54b	100	53.614	MGP_SPRETEiJ_G0026758	Rad54b	99	53.614	Mus_spretus
ENSGACG00000009128	rad54b	89	57.805	ENSMPUG00000008878	-	99	57.805	Mustela_putorius_furo
ENSGACG00000009128	rad54b	99	55.102	ENSMLUG00000008953	-	99	55.102	Myotis_lucifugus
ENSGACG00000009128	rad54b	100	54.957	ENSNGAG00000017537	Rad54b	99	54.957	Nannospalax_galili
ENSGACG00000009128	rad54b	99	79.280	ENSNBRG00000013394	rad54b	99	79.280	Neolamprologus_brichardi
ENSGACG00000009128	rad54b	99	54.624	ENSNLEG00000003062	-	99	58.266	Nomascus_leucogenys
ENSGACG00000009128	rad54b	71	60.546	ENSMEUG00000012426	-	71	60.546	Notamacropus_eugenii
ENSGACG00000009128	rad54b	99	54.310	ENSODEG00000019564	-	99	54.310	Octodon_degus
ENSGACG00000009128	rad54b	88	54.121	ENSODEG00000002650	-	95	59.908	Octodon_degus
ENSGACG00000009128	rad54b	99	80.000	ENSONIG00000006067	rad54b	99	80.000	Oreochromis_niloticus
ENSGACG00000009128	rad54b	82	60.263	ENSOANG00000011348	-	99	60.263	Ornithorhynchus_anatinus
ENSGACG00000009128	rad54b	99	54.301	ENSOCUG00000016478	-	99	54.301	Oryctolagus_cuniculus
ENSGACG00000009128	rad54b	99	75.214	ENSORLG00000008918	rad54b	99	84.448	Oryzias_latipes
ENSGACG00000009128	rad54b	70	83.981	ENSORLG00020012171	rad54b	99	83.981	Oryzias_latipes_hni
ENSGACG00000009128	rad54b	99	74.149	ENSORLG00015018536	rad54b	99	74.149	Oryzias_latipes_hsok
ENSGACG00000009128	rad54b	84	81.842	ENSOMEG00000004345	rad54b	99	81.842	Oryzias_melastigma
ENSGACG00000009128	rad54b	99	54.731	ENSOGAG00000007854	-	99	54.731	Otolemur_garnettii
ENSGACG00000009128	rad54b	89	58.394	ENSOARG00000007691	-	99	58.394	Ovis_aries
ENSGACG00000009128	rad54b	99	53.548	ENSPPAG00000029572	-	99	53.548	Pan_paniscus
ENSGACG00000009128	rad54b	99	55.076	ENSPPRG00000007571	-	99	59.647	Panthera_pardus
ENSGACG00000009128	rad54b	79	59.511	ENSPTIG00000012670	-	99	59.511	Panthera_tigris_altaica
ENSGACG00000009128	rad54b	99	54.839	ENSPTRG00000020427	-	99	58.401	Pan_troglodytes
ENSGACG00000009128	rad54b	99	54.908	ENSPANG00000019566	-	99	54.790	Papio_anubis
ENSGACG00000009128	rad54b	100	64.492	ENSPKIG00000014974	rad54b	99	64.492	Paramormyrops_kingsleyae
ENSGACG00000009128	rad54b	100	55.769	ENSPSIG00000002383	-	96	60.750	Pelodiscus_sinensis
ENSGACG00000009128	rad54b	100	53.614	ENSPEMG00000012133	Rad54b	99	53.614	Peromyscus_maniculatus_bairdii
ENSGACG00000009128	rad54b	85	57.987	ENSPMAG00000002916	rad54b	98	58.113	Petromyzon_marinus
ENSGACG00000009128	rad54b	87	58.189	ENSPCIG00000020151	-	93	57.940	Phascolarctos_cinereus
ENSGACG00000009128	rad54b	99	75.106	ENSPFOG00000023411	rad54b	99	75.106	Poecilia_formosa
ENSGACG00000009128	rad54b	99	75.133	ENSPLAG00000010430	rad54b	99	75.133	Poecilia_latipinna
ENSGACG00000009128	rad54b	99	75.080	ENSPMEG00000016873	rad54b	99	79.924	Poecilia_mexicana
ENSGACG00000009128	rad54b	99	75.290	ENSPREG00000018443	rad54b	99	75.290	Poecilia_reticulata
ENSGACG00000009128	rad54b	99	54.731	ENSPPYG00000018750	-	99	54.731	Pongo_abelii
ENSGACG00000009128	rad54b	99	55.169	ENSPCOG00000026845	-	99	59.066	Propithecus_coquereli
ENSGACG00000009128	rad54b	81	57.992	ENSPVAG00000000261	-	86	57.992	Pteropus_vampyrus
ENSGACG00000009128	rad54b	87	82.652	ENSPNYG00000018303	rad54b	97	82.652	Pundamilia_nyererei
ENSGACG00000009128	rad54b	99	62.420	ENSPNAG00000000295	rad54b	99	62.420	Pygocentrus_nattereri
ENSGACG00000009128	rad54b	100	53.326	ENSRNOG00000039949	Rad54b	99	53.506	Rattus_norvegicus
ENSGACG00000009128	rad54b	99	55.016	ENSRBIG00000020419	-	99	55.016	Rhinopithecus_bieti
ENSGACG00000009128	rad54b	99	54.908	ENSRROG00000039897	-	99	54.908	Rhinopithecus_roxellana
ENSGACG00000009128	rad54b	81	37.455	YBR073W	RDH54	82	37.973	Saccharomyces_cerevisiae
ENSGACG00000009128	rad54b	99	54.946	ENSSBOG00000028501	-	99	54.946	Saimiri_boliviensis_boliviensis
ENSGACG00000009128	rad54b	100	54.623	ENSSHAG00000017038	-	99	54.623	Sarcophilus_harrisii
ENSGACG00000009128	rad54b	62	70.826	ENSSFOG00015008483	rad54b	89	70.826	Scleropages_formosus
ENSGACG00000009128	rad54b	99	78.436	ENSSMAG00000018659	rad54b	99	78.436	Scophthalmus_maximus
ENSGACG00000009128	rad54b	97	79.280	ENSSDUG00000001122	rad54b	96	79.585	Seriola_dumerili
ENSGACG00000009128	rad54b	99	79.810	ENSSLDG00000013787	rad54b	99	80.106	Seriola_lalandi_dorsalis
ENSGACG00000009128	rad54b	100	56.681	ENSSPUG00000016497	-	99	56.681	Sphenodon_punctatus
ENSGACG00000009128	rad54b	99	79.565	ENSSPAG00000012800	rad54b	99	79.565	Stegastes_partitus
ENSGACG00000009128	rad54b	99	54.693	ENSSSCG00000006101	-	98	58.469	Sus_scrofa
ENSGACG00000009128	rad54b	100	56.897	ENSTGUG00000011880	-	100	56.897	Taeniopygia_guttata
ENSGACG00000009128	rad54b	99	74.316	ENSTRUG00000010015	rad54b	99	74.497	Takifugu_rubripes
ENSGACG00000009128	rad54b	99	51.832	ENSTTRG00000006312	-	99	51.832	Tursiops_truncatus
ENSGACG00000009128	rad54b	99	55.508	ENSUMAG00000016401	-	99	55.508	Ursus_maritimus
ENSGACG00000009128	rad54b	99	54.762	ENSVPAG00000003157	-	99	54.762	Vicugna_pacos
ENSGACG00000009128	rad54b	99	47.135	ENSXETG00000025924	rad54b	98	52.120	Xenopus_tropicalis
ENSGACG00000009128	rad54b	99	75.054	ENSXMAG00000013141	rad54b	99	75.054	Xiphophorus_maculatus