EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000009278 (Gene tree)
Gene ID: -
Gene Symbol: opa1
Alias: fk62d06|wu:fb77a10|wu:fk62d06|zgc:92092
Full Name: optic atrophy 1 (autosomal dominant)
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 28845 bases
Position: chrgroupVIII:11617064-11645908
Accession: ZDB-GENE-041114-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000012249	MMR_HSR1	PF01926.23	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000012273	-	3208	-	ENSGACP00000012249	966 (aa)	-	G3P3S6

Gene Model

Click here to download ENSGACG00000009278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000009278's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000009278	opa1	100	94.207	ENSAPOG00000011980	opa1	100	94.207	Acanthochromis_polyacanthus
ENSGACG00000009278	opa1	97	91.578	ENSACIG00000012521	opa1	97	91.578	Amphilophus_citrinellus
ENSGACG00000009278	opa1	100	94.207	ENSAOCG00000020559	opa1	100	94.207	Amphiprion_ocellaris
ENSGACG00000009278	opa1	100	95.859	ENSAPEG00000001641	opa1	100	95.859	Amphiprion_percula
ENSGACG00000009278	opa1	100	90.599	ENSAMXG00000012295	opa1	100	90.393	Astyanax_mexicanus
ENSGACG00000009278	opa1	91	52.392	WBGene00001134	eat-3	93	52.602	Caenorhabditis_elegans
ENSGACG00000009278	opa1	97	85.821	ENSCSEG00000014266	opa1	96	85.821	Cynoglossus_semilaevis
ENSGACG00000009278	opa1	98	92.267	ENSCVAG00000002438	opa1	100	89.842	Cyprinodon_variegatus
ENSGACG00000009278	opa1	100	90.393	ENSDARG00000070801	opa1	100	90.186	Danio_rerio
ENSGACG00000009278	opa1	93	54.545	FBgn0261276	Opa1	91	55.468	Drosophila_melanogaster
ENSGACG00000009278	opa1	89	95.912	ENSFHEG00000003616	opa1	97	95.912	Fundulus_heteroclitus
ENSGACG00000009278	opa1	98	95.349	ENSHBUG00000005897	opa1	100	95.349	Haplochromis_burtoni
ENSGACG00000009278	opa1	100	93.685	ENSHCOG00000016756	opa1	98	93.685	Hippocampus_comes
ENSGACG00000009278	opa1	76	96.065	ENSKMAG00000009415	opa1	94	96.065	Kryptolebias_marmoratus
ENSGACG00000009278	opa1	97	88.523	ENSMMOG00000008891	opa1	98	88.735	Mola_mola
ENSGACG00000009278	opa1	100	91.565	ENSMALG00000016968	opa1	100	91.565	Monopterus_albus
ENSGACG00000009278	opa1	97	91.702	ENSNBRG00000020394	opa1	98	91.702	Neolamprologus_brichardi
ENSGACG00000009278	opa1	100	77.710	ENSPKIG00000006473	OPA1	99	77.607	Paramormyrops_kingsleyae
ENSGACG00000009278	opa1	100	82.825	ENSPKIG00000003379	opa1	100	82.622	Paramormyrops_kingsleyae
ENSGACG00000009278	opa1	97	91.800	ENSPNYG00000021747	opa1	98	91.800	Pundamilia_nyererei
ENSGACG00000009278	opa1	100	90.909	ENSPNAG00000001917	opa1	100	90.702	Pygocentrus_nattereri
ENSGACG00000009278	opa1	97	82.075	ENSSFOG00015009303	OPA1	97	81.971	Scleropages_formosus
ENSGACG00000009278	opa1	97	91.426	ENSSMAG00000001797	opa1	97	91.426	Scophthalmus_maximus
ENSGACG00000009278	opa1	73	93.842	ENSSDUG00000004968	opa1	99	93.842	Seriola_dumerili
ENSGACG00000009278	opa1	100	90.864	ENSSLDG00000011089	opa1	100	90.668	Seriola_lalandi_dorsalis
ENSGACG00000009278	opa1	100	96.791	ENSSPAG00000018388	opa1	100	96.791	Stegastes_partitus
ENSGACG00000009278	opa1	78	92.063	ENSXCOG00000003267	opa1	92	92.063	Xiphophorus_couchianus
ENSGACG00000009278	opa1	77	93.834	ENSXMAG00000005593	opa1	99	93.834	Xiphophorus_maculatus