EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000009321 (Gene tree)
Gene ID: -
Gene Symbol: arl5c
Alias: zgc:77751
Full Name: ADP-ribosylation factor-like 5C
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 5415 bases
Position: chrgroupXI:6557595-6563009
Accession: ZDB-GENE-040426-1866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000012347	MMR_HSR1	PF01926.23	8.3e-08	1	1
ENSGACP00000012332	MMR_HSR1	PF01926.23	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000012356	-	594	-	ENSGACP00000012332	197 (aa)	-	G3P409
ENSGACT00000012371	-	876	-	ENSGACP00000012347	179 (aa)	-	G3P424

Gene Model

Click here to download ENSGACG00000009321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000009321's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000009321	arl5c	97	40.230	ENSGACG00000003070	arl3	94	40.230
ENSGACG00000009321	arl5c	100	72.067	ENSGACG00000001204	arl5a	98	72.067
ENSGACG00000009321	arl5c	95	41.111	ENSGACG00000012810	arl4aa	90	41.111
ENSGACG00000009321	arl5c	63	31.933	ENSGACG00000016164	rab4a	53	31.933
ENSGACG00000009321	arl5c	92	38.182	ENSGACG00000018033	arl3l2	88	38.182
ENSGACG00000009321	arl5c	78	31.250	ENSGACG00000005608	rab22a	72	31.250
ENSGACG00000009321	arl5c	88	38.182	ENSGACG00000010096	-	94	37.195
ENSGACG00000009321	arl5c	93	40.964	ENSGACG00000019812	arl2	97	40.884
ENSGACG00000009321	arl5c	100	45.810	ENSGACG00000017437	-	100	45.810
ENSGACG00000009321	arl5c	92	38.415	ENSGACG00000016756	-	90	38.415
ENSGACG00000009321	arl5c	98	72.571	ENSGACG00000004052	arl8	98	72.571
ENSGACG00000009321	arl5c	85	41.875	ENSGACG00000008143	arl4cb	82	41.875
ENSGACG00000009321	arl5c	85	41.772	ENSGACG00000000500	-	81	41.772
ENSGACG00000009321	arl5c	100	45.000	ENSGACG00000000746	arf3b	99	45.000
ENSGACG00000009321	arl5c	86	43.125	ENSGACG00000003710	arl4d	81	43.671
ENSGACG00000009321	arl5c	99	46.067	ENSGACG00000004343	arf2b	99	45.556
ENSGACG00000009321	arl5c	94	40.462	ENSGACG00000013840	arl14	96	40.462
ENSGACG00000009321	arl5c	100	38.919	ENSGACG00000006779	-	98	39.130
ENSGACG00000009321	arl5c	99	36.813	ENSGACG00000015382	ARL6	98	36.813
ENSGACG00000009321	arl5c	100	43.889	ENSGACG00000000686	arf5	100	43.889
ENSGACG00000009321	arl5c	100	46.111	ENSGACG00000009120	-	99	46.111
ENSGACG00000009321	arl5c	85	40.881	ENSGACG00000000497	-	80	40.881
ENSGACG00000009321	arl5c	99	49.153	ENSGACG00000014195	-	98	48.619
ENSGACG00000009321	arl5c	98	41.243	ENSGACG00000012500	-	98	41.243
ENSGACG00000009321	arl5c	98	42.697	ENSGACG00000003831	-	99	42.697
ENSGACG00000009321	arl5c	99	43.820	ENSGACG00000019098	arl1	98	43.820
ENSGACG00000009321	arl5c	93	38.636	ENSGACG00000011497	arfrp1	88	38.636
ENSGACG00000009321	arl5c	83	43.624	ENSGACG00000015399	arl11	86	43.624

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000009321	arl5c	100	89.385	ENSAPOG00000005821	arl5c	100	89.385	Acanthochromis_polyacanthus
ENSGACG00000009321	arl5c	92	93.902	ENSACIG00000008975	arl5c	91	93.902	Amphilophus_citrinellus
ENSGACG00000009321	arl5c	100	90.503	ENSAOCG00000010448	arl5c	100	90.503	Amphiprion_ocellaris
ENSGACG00000009321	arl5c	100	90.503	ENSAPEG00000002699	arl5c	100	90.503	Amphiprion_percula
ENSGACG00000009321	arl5c	98	88.068	ENSATEG00000000181	arl5c	98	88.068	Anabas_testudineus
ENSGACG00000009321	arl5c	100	91.061	ENSACLG00000000922	arl5c	100	92.073	Astatotilapia_calliptera
ENSGACG00000009321	arl5c	100	83.799	ENSAMXG00000031771	arl5c	100	83.799	Astyanax_mexicanus
ENSGACG00000009321	arl5c	100	84.916	ENSCSEG00000009845	arl5c	100	84.916	Cynoglossus_semilaevis
ENSGACG00000009321	arl5c	100	89.944	ENSCVAG00000012706	arl5c	100	89.944	Cyprinodon_variegatus
ENSGACG00000009321	arl5c	100	83.240	ENSDARG00000035719	arl5c	100	83.240	Danio_rerio
ENSGACG00000009321	arl5c	99	88.202	ENSELUG00000016864	arl5c	99	88.202	Esox_lucius
ENSGACG00000009321	arl5c	98	91.477	ENSFHEG00000013677	arl5c	98	91.477	Fundulus_heteroclitus
ENSGACG00000009321	arl5c	100	91.061	ENSGAFG00000002547	arl5c	100	91.061	Gambusia_affinis
ENSGACG00000009321	arl5c	100	91.061	ENSHBUG00000007301	arl5c	100	91.061	Haplochromis_burtoni
ENSGACG00000009321	arl5c	99	84.270	ENSHCOG00000017576	-	99	84.270	Hippocampus_comes
ENSGACG00000009321	arl5c	100	84.916	ENSIPUG00000023232	arl5c	100	84.916	Ictalurus_punctatus
ENSGACG00000009321	arl5c	98	92.045	ENSKMAG00000011323	arl5c	98	92.045	Kryptolebias_marmoratus
ENSGACG00000009321	arl5c	100	89.385	ENSLBEG00000006177	arl5c	99	80.097	Labrus_bergylta
ENSGACG00000009321	arl5c	100	89.944	ENSMAMG00000022157	arl5c	100	89.944	Mastacembelus_armatus
ENSGACG00000009321	arl5c	100	91.061	ENSMZEG00005022925	arl5c	100	91.061	Maylandia_zebra
ENSGACG00000009321	arl5c	92	94.512	ENSMMOG00000020851	arl5c	96	94.512	Mola_mola
ENSGACG00000009321	arl5c	92	89.634	ENSMALG00000009306	arl5c	93	89.634	Monopterus_albus
ENSGACG00000009321	arl5c	100	91.620	ENSNBRG00000020245	arl5c	100	92.683	Neolamprologus_brichardi
ENSGACG00000009321	arl5c	100	90.503	ENSONIG00000000890	arl5c	100	90.000	Oreochromis_niloticus
ENSGACG00000009321	arl5c	98	86.932	ENSORLG00000002960	arl5c	100	87.805	Oryzias_latipes
ENSGACG00000009321	arl5c	98	86.932	ENSORLG00020010074	arl5c	100	87.805	Oryzias_latipes_hni
ENSGACG00000009321	arl5c	98	86.932	ENSORLG00015002752	arl5c	100	87.805	Oryzias_latipes_hsok
ENSGACG00000009321	arl5c	95	86.471	ENSOMEG00000021718	arl5c	96	86.471	Oryzias_melastigma
ENSGACG00000009321	arl5c	99	88.764	ENSPKIG00000021727	arl5c	99	88.764	Paramormyrops_kingsleyae
ENSGACG00000009321	arl5c	100	89.944	ENSPFOG00000007842	arl5c	99	89.944	Poecilia_formosa
ENSGACG00000009321	arl5c	98	90.909	ENSPLAG00000002394	arl5c	98	90.909	Poecilia_latipinna
ENSGACG00000009321	arl5c	94	89.349	ENSPMEG00000000631	arl5c	98	89.349	Poecilia_mexicana
ENSGACG00000009321	arl5c	100	90.503	ENSPREG00000008730	arl5c	100	90.503	Poecilia_reticulata
ENSGACG00000009321	arl5c	100	91.061	ENSPNYG00000012720	arl5c	100	92.073	Pundamilia_nyererei
ENSGACG00000009321	arl5c	100	84.358	ENSPNAG00000002310	arl5c	100	84.358	Pygocentrus_nattereri
ENSGACG00000009321	arl5c	100	85.475	ENSSFOG00015023529	arl5c	100	85.475	Scleropages_formosus
ENSGACG00000009321	arl5c	100	90.503	ENSSMAG00000010552	arl5c	100	90.503	Scophthalmus_maximus
ENSGACG00000009321	arl5c	100	88.268	ENSSDUG00000022640	arl5c	100	88.268	Seriola_dumerili
ENSGACG00000009321	arl5c	100	88.268	ENSSLDG00000000728	arl5c	100	88.268	Seriola_lalandi_dorsalis
ENSGACG00000009321	arl5c	100	88.827	ENSSPAG00000007687	arl5c	100	88.827	Stegastes_partitus
ENSGACG00000009321	arl5c	100	90.503	ENSTRUG00000022814	arl5c	100	90.503	Takifugu_rubripes
ENSGACG00000009321	arl5c	99	89.326	ENSTNIG00000003015	arl5c	99	89.326	Tetraodon_nigroviridis
ENSGACG00000009321	arl5c	100	91.061	ENSXCOG00000017380	arl5c	100	91.061	Xiphophorus_couchianus
ENSGACG00000009321	arl5c	100	90.503	ENSXMAG00000008447	arl5c	100	90.503	Xiphophorus_maculatus