EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000009323 (Gene tree)
Gene ID: -
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 4678 bases
Position: chrgroupVIII:11686865-11691542
Accession: ZDB-GENE-030131-2184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000012303	MMR_HSR1	PF01926.23	1.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000012327	-	2314	-	ENSGACP00000012303	637 (aa)	-	G3P3Y0

Gene Model

Click here to download ENSGACG00000009323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000009323's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000009323	lsg1	99	62.651	ENSG00000041802	LSG1	90	73.171	Homo_sapiens
ENSGACG00000009323	lsg1	100	79.251	ENSAPOG00000009694	lsg1	99	80.255	Acanthochromis_polyacanthus
ENSGACG00000009323	lsg1	100	60.597	ENSAMEG00000009343	LSG1	98	61.280	Ailuropoda_melanoleuca
ENSGACG00000009323	lsg1	98	81.120	ENSACIG00000012406	lsg1	98	81.120	Amphilophus_citrinellus
ENSGACG00000009323	lsg1	100	78.505	ENSAOCG00000016066	lsg1	99	79.332	Amphiprion_ocellaris
ENSGACG00000009323	lsg1	100	78.660	ENSAPEG00000003252	lsg1	99	79.014	Amphiprion_percula
ENSGACG00000009323	lsg1	98	81.440	ENSATEG00000011794	lsg1	98	82.080	Anabas_testudineus
ENSGACG00000009323	lsg1	94	60.766	ENSACAG00000004222	LSG1	99	61.563	Anolis_carolinensis
ENSGACG00000009323	lsg1	99	61.826	ENSANAG00000021153	LSG1	98	62.730	Aotus_nancymaae
ENSGACG00000009323	lsg1	100	79.847	ENSACLG00000000520	lsg1	98	79.907	Astatotilapia_calliptera
ENSGACG00000009323	lsg1	100	70.633	ENSAMXG00000008271	lsg1	98	71.807	Astyanax_mexicanus
ENSGACG00000009323	lsg1	99	63.374	ENSBTAG00000008461	LSG1	98	63.721	Bos_taurus
ENSGACG00000009323	lsg1	69	46.939	WBGene00016907	C53H9.2	76	53.659	Caenorhabditis_elegans
ENSGACG00000009323	lsg1	99	61.261	ENSCJAG00000013962	LSG1	98	62.154	Callithrix_jacchus
ENSGACG00000009323	lsg1	94	63.091	ENSCAFG00000013445	LSG1	99	63.191	Canis_familiaris
ENSGACG00000009323	lsg1	100	61.940	ENSCAFG00020002216	LSG1	99	63.434	Canis_lupus_dingo
ENSGACG00000009323	lsg1	100	63.497	ENSCHIG00000015769	LSG1	98	63.158	Capra_hircus
ENSGACG00000009323	lsg1	99	62.556	ENSTSYG00000001447	LSG1	98	62.730	Carlito_syrichta
ENSGACG00000009323	lsg1	94	64.404	ENSCAPG00000009856	LSG1	99	64.216	Cavia_aperea
ENSGACG00000009323	lsg1	99	61.527	ENSCCAG00000035744	LSG1	98	62.423	Cebus_capucinus
ENSGACG00000009323	lsg1	99	62.388	ENSCATG00000042060	LSG1	98	62.385	Cercocebus_atys
ENSGACG00000009323	lsg1	99	62.033	ENSCSAG00000008796	LSG1	90	62.980	Chlorocebus_sabaeus
ENSGACG00000009323	lsg1	100	64.072	ENSCPBG00000015941	LSG1	82	65.237	Chrysemys_picta_bellii
ENSGACG00000009323	lsg1	74	53.097	ENSCING00000007079	-	97	53.138	Ciona_intestinalis
ENSGACG00000009323	lsg1	83	51.095	ENSCSAVG00000002514	-	94	53.138	Ciona_savignyi
ENSGACG00000009323	lsg1	99	62.239	ENSCANG00000030709	LSG1	98	63.150	Colobus_angolensis_palliatus
ENSGACG00000009323	lsg1	99	63.876	ENSCGRG00001019846	Lsg1	98	64.241	Cricetulus_griseus_chok1gshd
ENSGACG00000009323	lsg1	99	63.206	ENSCGRG00000014617	Lsg1	98	63.551	Cricetulus_griseus_crigri
ENSGACG00000009323	lsg1	98	76.287	ENSCSEG00000008522	lsg1	98	76.287	Cynoglossus_semilaevis
ENSGACG00000009323	lsg1	97	77.331	ENSCVAG00000002484	lsg1	98	77.724	Cyprinodon_variegatus
ENSGACG00000009323	lsg1	100	73.570	ENSDARG00000015352	lsg1	98	73.618	Danio_rerio
ENSGACG00000009323	lsg1	99	62.142	ENSDNOG00000006224	LSG1	98	61.832	Dasypus_novemcinctus
ENSGACG00000009323	lsg1	99	48.834	FBgn0266284	Ns3	98	49.365	Drosophila_melanogaster
ENSGACG00000009323	lsg1	88	67.532	ENSETEG00000003888	LSG1	87	70.312	Echinops_telfairi
ENSGACG00000009323	lsg1	88	56.304	ENSEBUG00000003119	lsg1	85	56.304	Eptatretus_burgeri
ENSGACG00000009323	lsg1	99	61.799	ENSEASG00005000678	LSG1	98	63.206	Equus_asinus_asinus
ENSGACG00000009323	lsg1	99	63.024	ENSECAG00000017659	LSG1	98	63.318	Equus_caballus
ENSGACG00000009323	lsg1	86	58.333	ENSEEUG00000015217	LSG1	75	60.313	Erinaceus_europaeus
ENSGACG00000009323	lsg1	100	72.462	ENSELUG00000023973	lsg1	98	72.841	Esox_lucius
ENSGACG00000009323	lsg1	100	61.955	ENSFCAG00000024957	LSG1	98	62.730	Felis_catus
ENSGACG00000009323	lsg1	92	60.835	ENSFALG00000007210	LSG1	94	61.316	Ficedula_albicollis
ENSGACG00000009323	lsg1	99	62.423	ENSFDAG00000017373	LSG1	98	63.150	Fukomys_damarensis
ENSGACG00000009323	lsg1	97	77.229	ENSFHEG00000003680	lsg1	98	77.338	Fundulus_heteroclitus
ENSGACG00000009323	lsg1	98	74.840	ENSGMOG00000015834	lsg1	98	74.840	Gadus_morhua
ENSGACG00000009323	lsg1	99	57.692	ENSGALG00000007058	LSG1	82	59.776	Gallus_gallus
ENSGACG00000009323	lsg1	97	78.331	ENSGAFG00000015831	lsg1	98	78.080	Gambusia_affinis
ENSGACG00000009323	lsg1	99	62.239	ENSGGOG00000000520	LSG1	98	63.150	Gorilla_gorilla
ENSGACG00000009323	lsg1	100	80.989	ENSHBUG00000005659	lsg1	98	81.073	Haplochromis_burtoni
ENSGACG00000009323	lsg1	99	61.146	ENSHGLG00000017390	LSG1	98	61.129	Heterocephalus_glaber_female
ENSGACG00000009323	lsg1	99	61.146	ENSHGLG00100018587	LSG1	98	61.129	Heterocephalus_glaber_male
ENSGACG00000009323	lsg1	97	79.239	ENSHCOG00000016848	lsg1	98	79.338	Hippocampus_comes
ENSGACG00000009323	lsg1	100	72.136	ENSIPUG00000008631	lsg1	98	72.152	Ictalurus_punctatus
ENSGACG00000009323	lsg1	75	58.103	ENSSTOG00000010234	LSG1	92	58.532	Ictidomys_tridecemlineatus
ENSGACG00000009323	lsg1	99	64.330	ENSJJAG00000015513	Lsg1	98	64.706	Jaculus_jaculus
ENSGACG00000009323	lsg1	98	76.145	ENSKMAG00000009681	lsg1	98	76.145	Kryptolebias_marmoratus
ENSGACG00000009323	lsg1	98	80.769	ENSLBEG00000024261	lsg1	98	80.769	Labrus_bergylta
ENSGACG00000009323	lsg1	100	64.190	ENSLACG00000013399	LSG1	98	64.545	Latimeria_chalumnae
ENSGACG00000009323	lsg1	98	67.846	ENSLOCG00000004918	lsg1	98	69.088	Lepisosteus_oculatus
ENSGACG00000009323	lsg1	99	62.270	ENSLAFG00000012919	-	98	63.067	Loxodonta_africana
ENSGACG00000009323	lsg1	99	62.090	ENSMFAG00000039903	LSG1	98	62.080	Macaca_fascicularis
ENSGACG00000009323	lsg1	99	62.090	ENSMMUG00000010708	LSG1	98	62.997	Macaca_mulatta
ENSGACG00000009323	lsg1	99	62.090	ENSMNEG00000031538	LSG1	98	62.080	Macaca_nemestrina
ENSGACG00000009323	lsg1	99	61.940	ENSMLEG00000041184	LSG1	98	62.844	Mandrillus_leucophaeus
ENSGACG00000009323	lsg1	100	78.438	ENSMAMG00000000470	lsg1	98	78.788	Mastacembelus_armatus
ENSGACG00000009323	lsg1	100	80.989	ENSMZEG00005017865	lsg1	98	81.073	Maylandia_zebra
ENSGACG00000009323	lsg1	88	59.370	ENSMGAG00000007050	LSG1	99	59.867	Meleagris_gallopavo
ENSGACG00000009323	lsg1	91	62.309	ENSMAUG00000016976	Lsg1	90	63.066	Mesocricetus_auratus
ENSGACG00000009323	lsg1	99	61.934	ENSMICG00000049087	LSG1	98	62.250	Microcebus_murinus
ENSGACG00000009323	lsg1	99	62.195	ENSMOCG00000022136	Lsg1	98	62.675	Microtus_ochrogaster
ENSGACG00000009323	lsg1	87	87.654	ENSMMOG00000008884	lsg1	98	75.962	Mola_mola
ENSGACG00000009323	lsg1	99	54.255	ENSMODG00000019828	LSG1	98	54.518	Monodelphis_domestica
ENSGACG00000009323	lsg1	100	64.407	MGP_CAROLIEiJ_G0020648	Lsg1	98	64.780	Mus_caroli
ENSGACG00000009323	lsg1	100	63.482	ENSMUSG00000022538	Lsg1	98	64.465	Mus_musculus
ENSGACG00000009323	lsg1	98	63.060	MGP_PahariEiJ_G0016352	Lsg1	98	63.509	Mus_pahari
ENSGACG00000009323	lsg1	100	63.859	MGP_SPRETEiJ_G0021544	Lsg1	98	64.688	Mus_spretus
ENSGACG00000009323	lsg1	100	60.746	ENSMPUG00000003734	LSG1	98	61.760	Mustela_putorius_furo
ENSGACG00000009323	lsg1	100	62.707	ENSMLUG00000012548	LSG1	98	62.883	Myotis_lucifugus
ENSGACG00000009323	lsg1	99	62.080	ENSNGAG00000021872	Lsg1	98	62.402	Nannospalax_galili
ENSGACG00000009323	lsg1	99	62.985	ENSNLEG00000008293	LSG1	98	63.623	Nomascus_leucogenys
ENSGACG00000009323	lsg1	69	71.429	ENSMEUG00000009041	-	85	71.429	Notamacropus_eugenii
ENSGACG00000009323	lsg1	100	79.728	ENSONIG00000002635	lsg1	98	80.908	Oreochromis_niloticus
ENSGACG00000009323	lsg1	94	65.280	ENSOANG00000012742	LSG1	99	65.280	Ornithorhynchus_anatinus
ENSGACG00000009323	lsg1	99	62.219	ENSOCUG00000004817	LSG1	98	63.303	Oryctolagus_cuniculus
ENSGACG00000009323	lsg1	98	76.603	ENSORLG00000007695	lsg1	98	75.791	Oryzias_latipes
ENSGACG00000009323	lsg1	98	76.763	ENSORLG00020016286	lsg1	98	76.763	Oryzias_latipes_hni
ENSGACG00000009323	lsg1	98	76.282	ENSORLG00015012025	lsg1	98	76.603	Oryzias_latipes_hsok
ENSGACG00000009323	lsg1	98	74.441	ENSOMEG00000022379	lsg1	98	74.601	Oryzias_melastigma
ENSGACG00000009323	lsg1	99	61.664	ENSOGAG00000003475	LSG1	98	62.405	Otolemur_garnettii
ENSGACG00000009323	lsg1	100	62.253	ENSOARG00000020403	LSG1	98	62.577	Ovis_aries
ENSGACG00000009323	lsg1	99	62.537	ENSPPAG00000029271	LSG1	98	62.709	Pan_paniscus
ENSGACG00000009323	lsg1	100	60.805	ENSPPRG00000010281	LSG1	98	61.550	Panthera_pardus
ENSGACG00000009323	lsg1	100	61.504	ENSPTIG00000010789	LSG1	98	62.270	Panthera_tigris_altaica
ENSGACG00000009323	lsg1	99	62.801	ENSPTRG00000015760	LSG1	98	63.134	Pan_troglodytes
ENSGACG00000009323	lsg1	99	62.090	ENSPANG00000018249	LSG1	98	62.080	Papio_anubis
ENSGACG00000009323	lsg1	99	69.484	ENSPKIG00000002895	lsg1	98	70.335	Paramormyrops_kingsleyae
ENSGACG00000009323	lsg1	96	60.187	ENSPSIG00000009821	LSG1	99	60.187	Pelodiscus_sinensis
ENSGACG00000009323	lsg1	94	77.483	ENSPMGG00000000931	lsg1	99	77.483	Periophthalmus_magnuspinnatus
ENSGACG00000009323	lsg1	99	62.557	ENSPEMG00000012082	-	98	62.888	Peromyscus_maniculatus_bairdii
ENSGACG00000009323	lsg1	99	58.841	ENSPMAG00000007451	lsg1	98	58.788	Petromyzon_marinus
ENSGACG00000009323	lsg1	98	64.398	ENSPCIG00000013890	LSG1	79	64.398	Phascolarctos_cinereus
ENSGACG00000009323	lsg1	97	78.628	ENSPFOG00000021882	lsg1	98	78.730	Poecilia_formosa
ENSGACG00000009323	lsg1	97	77.990	ENSPLAG00000019536	lsg1	98	78.095	Poecilia_latipinna
ENSGACG00000009323	lsg1	97	77.742	ENSPMEG00000017281	lsg1	98	77.848	Poecilia_mexicana
ENSGACG00000009323	lsg1	97	68.246	ENSPREG00000006048	lsg1	98	68.239	Poecilia_reticulata
ENSGACG00000009323	lsg1	92	60.912	ENSPPYG00000014425	LSG1	98	61.231	Pongo_abelii
ENSGACG00000009323	lsg1	89	67.532	ENSPCAG00000005511	LSG1	87	70.312	Procavia_capensis
ENSGACG00000009323	lsg1	99	61.898	ENSPCOG00000012360	LSG1	98	61.963	Propithecus_coquereli
ENSGACG00000009323	lsg1	100	79.847	ENSPNYG00000021994	lsg1	98	79.907	Pundamilia_nyererei
ENSGACG00000009323	lsg1	100	74.154	ENSPNAG00000015533	lsg1	98	74.411	Pygocentrus_nattereri
ENSGACG00000009323	lsg1	100	62.913	ENSRNOG00000001727	Lsg1	98	63.790	Rattus_norvegicus
ENSGACG00000009323	lsg1	99	62.651	ENSRBIG00000029053	LSG1	98	62.980	Rhinopithecus_bieti
ENSGACG00000009323	lsg1	99	62.651	ENSRROG00000037702	LSG1	98	62.980	Rhinopithecus_roxellana
ENSGACG00000009323	lsg1	77	42.209	YGL099W	LSG1	70	42.436	Saccharomyces_cerevisiae
ENSGACG00000009323	lsg1	99	61.976	ENSSBOG00000034938	LSG1	98	62.883	Saimiri_boliviensis_boliviensis
ENSGACG00000009323	lsg1	77	60.377	ENSSHAG00000003487	LSG1	100	61.017	Sarcophilus_harrisii
ENSGACG00000009323	lsg1	98	71.497	ENSSFOG00015008955	lsg1	98	71.497	Scleropages_formosus
ENSGACG00000009323	lsg1	98	82.362	ENSSDUG00000004622	lsg1	98	82.362	Seriola_dumerili
ENSGACG00000009323	lsg1	98	82.051	ENSSLDG00000010869	lsg1	98	82.051	Seriola_lalandi_dorsalis
ENSGACG00000009323	lsg1	82	64.348	ENSSARG00000012981	LSG1	72	70.588	Sorex_araneus
ENSGACG00000009323	lsg1	100	63.964	ENSSPUG00000016347	LSG1	98	63.957	Sphenodon_punctatus
ENSGACG00000009323	lsg1	100	77.778	ENSSPAG00000005508	lsg1	99	78.435	Stegastes_partitus
ENSGACG00000009323	lsg1	100	62.006	ENSSSCG00000011827	LSG1	98	62.791	Sus_scrofa
ENSGACG00000009323	lsg1	88	59.603	ENSTGUG00000009068	LSG1	100	60.099	Taeniopygia_guttata
ENSGACG00000009323	lsg1	97	74.277	ENSTRUG00000017380	lsg1	98	74.240	Takifugu_rubripes
ENSGACG00000009323	lsg1	97	78.205	ENSTNIG00000015570	lsg1	98	78.150	Tetraodon_nigroviridis
ENSGACG00000009323	lsg1	91	66.667	ENSTTRG00000000559	LSG1	89	66.667	Tursiops_truncatus
ENSGACG00000009323	lsg1	100	60.448	ENSUAMG00000012454	LSG1	98	61.280	Ursus_americanus
ENSGACG00000009323	lsg1	100	60.448	ENSUMAG00000000855	LSG1	98	61.280	Ursus_maritimus
ENSGACG00000009323	lsg1	94	60.159	ENSVPAG00000012400	LSG1	99	60.159	Vicugna_pacos
ENSGACG00000009323	lsg1	94	62.816	ENSVVUG00000008956	LSG1	98	62.133	Vulpes_vulpes
ENSGACG00000009323	lsg1	100	65.749	ENSXETG00000003451	lsg1	98	66.348	Xenopus_tropicalis
ENSGACG00000009323	lsg1	97	78.240	ENSXCOG00000003239	lsg1	98	78.185	Xiphophorus_couchianus
ENSGACG00000009323	lsg1	97	77.223	ENSXMAG00000005536	lsg1	98	77.329	Xiphophorus_maculatus