EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000009448 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 31765 bases
Position: chrgroupXV:7288359-7320123
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000012468	ResIII	PF04851.15	2.1e-18	1	1
ENSGACP00000012468	DEAD	PF00270.29	5.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000012492	-	5799	-	ENSGACP00000012468	1933 (aa)	-	G3P4E5

Gene Model

Click here to download ENSGACG00000009448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000009448's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000009448	-	81	48.148	ENSG00000187790	FANCM	96	60.823	Homo_sapiens
ENSGACG00000009448	-	83	48.520	ENSAMEG00000002114	FANCM	80	48.316	Ailuropoda_melanoleuca
ENSGACG00000009448	-	100	59.640	ENSATEG00000012412	-	99	60.166	Anabas_testudineus
ENSGACG00000009448	-	82	47.796	ENSANAG00000025075	FANCM	68	56.384	Aotus_nancymaae
ENSGACG00000009448	-	99	55.801	ENSACLG00000016008	-	99	56.152	Astatotilapia_calliptera
ENSGACG00000009448	-	83	45.294	ENSAMXG00000020275	-	91	45.012	Astyanax_mexicanus
ENSGACG00000009448	-	71	57.572	ENSBTAG00000002612	FANCM	95	60.282	Bos_taurus
ENSGACG00000009448	-	82	47.688	ENSCJAG00000015945	FANCM	68	56.637	Callithrix_jacchus
ENSGACG00000009448	-	72	57.393	ENSCAFG00000014062	FANCM	69	57.268	Canis_familiaris
ENSGACG00000009448	-	72	57.447	ENSCHIG00000015176	FANCM	68	57.322	Capra_hircus
ENSGACG00000009448	-	94	47.196	ENSCPOG00000001446	FANCM	69	58.420	Cavia_porcellus
ENSGACG00000009448	-	77	48.062	ENSCCAG00000026593	FANCM	65	56.533	Cebus_capucinus
ENSGACG00000009448	-	72	56.747	ENSCATG00000031379	FANCM	68	56.620	Cercocebus_atys
ENSGACG00000009448	-	72	56.494	ENSCSAG00000015308	FANCM	68	56.242	Chlorocebus_sabaeus
ENSGACG00000009448	-	88	42.708	ENSCPBG00000015089	FANCM	78	49.365	Chrysemys_picta_bellii
ENSGACG00000009448	-	72	56.494	ENSCANG00000029498	FANCM	68	56.620	Colobus_angolensis_palliatus
ENSGACG00000009448	-	99	38.417	ENSCGRG00001023573	Fancm	81	56.781	Cricetulus_griseus_chok1gshd
ENSGACG00000009448	-	97	55.611	ENSCSEG00000002313	-	99	54.310	Cynoglossus_semilaevis
ENSGACG00000009448	-	97	54.602	ENSCVAG00000015579	-	98	54.756	Cyprinodon_variegatus
ENSGACG00000009448	-	90	57.216	ENSDNOG00000007697	FANCM	68	56.946	Dasypus_novemcinctus
ENSGACG00000009448	-	99	39.333	ENSDORG00000010095	Fancm	89	58.085	Dipodomys_ordii
ENSGACG00000009448	-	50	58.654	ENSETEG00000003360	FANCM	52	58.654	Echinops_telfairi
ENSGACG00000009448	-	65	53.543	ENSEASG00005007781	FANCM	96	63.579	Equus_asinus_asinus
ENSGACG00000009448	-	65	57.286	ENSECAG00000018694	FANCM	54	56.733	Equus_caballus
ENSGACG00000009448	-	51	53.101	ENSEEUG00000005607	-	51	52.326	Erinaceus_europaeus
ENSGACG00000009448	-	83	67.568	ENSELUG00000015761	-	95	50.526	Esox_lucius
ENSGACG00000009448	-	67	57.809	ENSFDAG00000009043	FANCM	67	57.503	Fukomys_damarensis
ENSGACG00000009448	-	97	70.665	ENSGMOG00000002019	-	99	70.428	Gadus_morhua
ENSGACG00000009448	-	67	57.476	ENSGALG00000031182	FANCM	75	55.749	Gallus_gallus
ENSGACG00000009448	-	81	48.387	ENSGGOG00000008546	FANCM	68	56.873	Gorilla_gorilla
ENSGACG00000009448	-	99	55.237	ENSHBUG00000007085	-	99	55.363	Haplochromis_burtoni
ENSGACG00000009448	-	67	57.538	ENSHGLG00000013787	FANCM	66	57.663	Heterocephalus_glaber_female
ENSGACG00000009448	-	66	57.538	ENSHGLG00100006377	FANCM	66	57.663	Heterocephalus_glaber_male
ENSGACG00000009448	-	90	62.385	ENSIPUG00000014629	fancm	93	62.385	Ictalurus_punctatus
ENSGACG00000009448	-	75	66.279	ENSLBEG00000004982	-	97	59.109	Labrus_bergylta
ENSGACG00000009448	-	85	58.250	ENSLACG00000007739	FANCM	75	57.697	Latimeria_chalumnae
ENSGACG00000009448	-	87	61.017	ENSLOCG00000011318	FANCM	83	65.031	Lepisosteus_oculatus
ENSGACG00000009448	-	78	57.179	ENSLAFG00000001136	FANCM	69	57.196	Loxodonta_africana
ENSGACG00000009448	-	72	56.494	ENSMFAG00000000383	FANCM	68	56.242	Macaca_fascicularis
ENSGACG00000009448	-	72	56.494	ENSMMUG00000016513	FANCM	68	56.242	Macaca_mulatta
ENSGACG00000009448	-	72	56.423	ENSMNEG00000038659	FANCM	68	56.171	Macaca_nemestrina
ENSGACG00000009448	-	72	49.680	ENSMLEG00000035743	FANCM	66	49.424	Mandrillus_leucophaeus
ENSGACG00000009448	-	100	58.380	ENSMAMG00000007087	-	99	57.917	Mastacembelus_armatus
ENSGACG00000009448	-	99	55.755	ENSMZEG00005004644	-	99	56.105	Maylandia_zebra
ENSGACG00000009448	-	83	54.220	ENSMAUG00000015450	Fancm	81	53.787	Mesocricetus_auratus
ENSGACG00000009448	-	71	57.196	ENSMICG00000005811	FANCM	68	57.644	Microcebus_murinus
ENSGACG00000009448	-	99	39.547	ENSMOCG00000008775	Fancm	99	39.645	Microtus_ochrogaster
ENSGACG00000009448	-	80	77.880	ENSMMOG00000010215	-	90	77.880	Mola_mola
ENSGACG00000009448	-	89	48.776	ENSMODG00000007334	FANCM	68	57.000	Monodelphis_domestica
ENSGACG00000009448	-	99	38.680	MGP_CAROLIEiJ_G0017791	Fancm	85	53.404	Mus_caroli
ENSGACG00000009448	-	94	53.618	ENSMUSG00000055884	Fancm	95	60.742	Mus_musculus
ENSGACG00000009448	-	87	50.472	MGP_PahariEiJ_G0029547	Fancm	81	53.787	Mus_pahari
ENSGACG00000009448	-	99	38.469	MGP_SPRETEiJ_G0018636	Fancm	85	53.508	Mus_spretus
ENSGACG00000009448	-	72	57.610	ENSMPUG00000004849	FANCM	69	57.107	Mustela_putorius_furo
ENSGACG00000009448	-	99	37.833	ENSMLUG00000006671	FANCM	69	55.849	Myotis_lucifugus
ENSGACG00000009448	-	99	38.267	ENSNGAG00000017199	Fancm	99	38.158	Nannospalax_galili
ENSGACG00000009448	-	82	48.738	ENSNLEG00000004432	FANCM	68	57.251	Nomascus_leucogenys
ENSGACG00000009448	-	62	51.821	ENSMEUG00000004977	-	59	51.895	Notamacropus_eugenii
ENSGACG00000009448	-	91	76.596	ENSONIG00000003531	-	90	76.596	Oreochromis_niloticus
ENSGACG00000009448	-	76	58.333	ENSOANG00000013997	FANCM	78	58.475	Ornithorhynchus_anatinus
ENSGACG00000009448	-	82	50.343	ENSOCUG00000007539	FANCM	69	57.750	Oryctolagus_cuniculus
ENSGACG00000009448	-	99	54.545	ENSORLG00000014503	-	99	55.118	Oryzias_latipes
ENSGACG00000009448	-	99	54.571	ENSORLG00020013516	-	99	54.950	Oryzias_latipes_hni
ENSGACG00000009448	-	99	54.558	ENSORLG00015012100	-	99	54.981	Oryzias_latipes_hsok
ENSGACG00000009448	-	99	55.744	ENSOMEG00000010717	-	98	56.241	Oryzias_melastigma
ENSGACG00000009448	-	72	58.239	ENSOGAG00000003015	FANCM	69	58.113	Otolemur_garnettii
ENSGACG00000009448	-	72	57.447	ENSOARG00000009429	FANCM	68	57.322	Ovis_aries
ENSGACG00000009448	-	99	37.792	ENSPPAG00000028944	FANCM	68	57.251	Pan_paniscus
ENSGACG00000009448	-	99	37.649	ENSPTRG00000006307	FANCM	68	56.873	Pan_troglodytes
ENSGACG00000009448	-	72	56.494	ENSPANG00000023200	FANCM	68	56.242	Papio_anubis
ENSGACG00000009448	-	91	56.466	ENSPEMG00000005619	Fancm	69	56.082	Peromyscus_maniculatus_bairdii
ENSGACG00000009448	-	83	75.664	ENSPFOG00000002008	-	84	75.664	Poecilia_formosa
ENSGACG00000009448	-	96	73.023	ENSPLAG00000014164	-	99	54.681	Poecilia_latipinna
ENSGACG00000009448	-	96	73.488	ENSPMEG00000010746	-	99	54.519	Poecilia_mexicana
ENSGACG00000009448	-	92	73.023	ENSPREG00000019849	-	99	54.734	Poecilia_reticulata
ENSGACG00000009448	-	72	56.999	ENSPPYG00000005781	FANCM	72	56.999	Pongo_abelii
ENSGACG00000009448	-	66	52.836	ENSPCAG00000011363	-	56	52.836	Procavia_capensis
ENSGACG00000009448	-	65	56.977	ENSPCOG00000014388	FANCM	65	58.480	Propithecus_coquereli
ENSGACG00000009448	-	60	59.912	ENSPVAG00000015802	FANCM	63	59.912	Pteropus_vampyrus
ENSGACG00000009448	-	93	61.538	ENSPNAG00000013558	-	95	61.538	Pygocentrus_nattereri
ENSGACG00000009448	-	80	54.955	ENSRNOG00000056721	Fancm	77	55.341	Rattus_norvegicus
ENSGACG00000009448	-	67	56.281	ENSRBIG00000011451	FANCM	68	56.352	Rhinopithecus_bieti
ENSGACG00000009448	-	72	56.297	ENSRROG00000028917	FANCM	68	56.368	Rhinopithecus_roxellana
ENSGACG00000009448	-	82	48.004	ENSSBOG00000030882	FANCM	79	48.378	Saimiri_boliviensis_boliviensis
ENSGACG00000009448	-	87	42.790	ENSSHAG00000000507	FANCM	81	48.403	Sarcophilus_harrisii
ENSGACG00000009448	-	99	59.933	ENSSMAG00000019903	-	99	68.039	Scophthalmus_maximus
ENSGACG00000009448	-	69	58.865	ENSSDUG00000016682	-	96	84.726	Seriola_dumerili
ENSGACG00000009448	-	97	64.965	ENSSLDG00000003408	-	99	59.590	Seriola_lalandi_dorsalis
ENSGACG00000009448	-	53	60.631	ENSSARG00000002618	FANCM	50	60.465	Sorex_araneus
ENSGACG00000009448	-	99	38.314	ENSSSCG00000005000	FANCM	78	48.627	Sus_scrofa
ENSGACG00000009448	-	100	56.122	ENSTNIG00000017277	-	99	56.417	Tetraodon_nigroviridis
ENSGACG00000009448	-	72	55.945	ENSTTRG00000006669	FANCM	68	55.695	Tursiops_truncatus
ENSGACG00000009448	-	66	62.029	ENSVPAG00000005763	FANCM	63	62.029	Vicugna_pacos
ENSGACG00000009448	-	71	57.393	ENSVVUG00000000357	FANCM	68	57.268	Vulpes_vulpes
ENSGACG00000009448	-	92	72.558	ENSXMAG00000007702	-	99	53.779	Xiphophorus_maculatus