EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000009462 (Gene tree)
Gene ID: -
Gene Symbol: rbm19
Alias: nil per os|npo
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 5934 bases
Position: chrgroupXIII:9303459-9309392
Accession: ZDB-GENE-031125-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000012517	RRM_1	PF00076.22	4.7e-86	1	5
ENSGACP00000012517	RRM_1	PF00076.22	4.7e-86	2	5
ENSGACP00000012517	RRM_1	PF00076.22	4.7e-86	3	5
ENSGACP00000012517	RRM_1	PF00076.22	4.7e-86	4	5
ENSGACP00000012517	RRM_1	PF00076.22	4.7e-86	5	5
ENSGACP00000012505	RRM_1	PF00076.22	5e-86	1	5
ENSGACP00000012505	RRM_1	PF00076.22	5e-86	2	5
ENSGACP00000012505	RRM_1	PF00076.22	5e-86	3	5
ENSGACP00000012505	RRM_1	PF00076.22	5e-86	4	5
ENSGACP00000012505	RRM_1	PF00076.22	5e-86	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000012529	-	2745	-	ENSGACP00000012505	915 (aa)	-	G3P4I2
ENSGACT00000012541	-	2715	-	ENSGACP00000012517	905 (aa)	-	G3P4J4

Gene Model

Click here to download ENSGACG00000009462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000009462's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000009462	rbm19	75	34.667	ENSGACG00000003572	pabpc1a	58	34.667
ENSGACG00000009462	rbm19	59	38.158	ENSGACG00000002792	pabpc1l	58	34.667
ENSGACG00000009462	rbm19	69	32.927	ENSGACG00000003771	pabpc1b	65	32.927

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000009462	rbm19	100	56.681	ENSG00000122965	RBM19	85	71.579	Homo_sapiens
ENSGACG00000009462	rbm19	100	82.623	ENSAPOG00000010507	rbm19	99	81.542	Acanthochromis_polyacanthus
ENSGACG00000009462	rbm19	100	55.824	ENSAMEG00000008544	RBM19	99	55.212	Ailuropoda_melanoleuca
ENSGACG00000009462	rbm19	100	80.131	ENSACIG00000017780	rbm19	99	79.803	Amphilophus_citrinellus
ENSGACG00000009462	rbm19	100	82.334	ENSAOCG00000008554	rbm19	99	81.622	Amphiprion_ocellaris
ENSGACG00000009462	rbm19	100	80.677	ENSAPEG00000022381	rbm19	96	82.413	Amphiprion_percula
ENSGACG00000009462	rbm19	99	80.442	ENSATEG00000007000	rbm19	99	80.459	Anabas_testudineus
ENSGACG00000009462	rbm19	95	55.714	ENSAPLG00000015319	RBM19	99	55.860	Anas_platyrhynchos
ENSGACG00000009462	rbm19	100	55.787	ENSACAG00000005065	RBM19	99	55.612	Anolis_carolinensis
ENSGACG00000009462	rbm19	100	57.248	ENSANAG00000024136	RBM19	99	56.302	Aotus_nancymaae
ENSGACG00000009462	rbm19	100	72.065	ENSACLG00000001399	rbm19	99	71.690	Astatotilapia_calliptera
ENSGACG00000009462	rbm19	66	69.717	ENSAMXG00000017073	rbm19	99	61.386	Astyanax_mexicanus
ENSGACG00000009462	rbm19	100	56.513	ENSBTAG00000031824	RBM19	99	56.296	Bos_taurus
ENSGACG00000009462	rbm19	84	43.158	WBGene00004315	rbd-1	96	43.158	Caenorhabditis_elegans
ENSGACG00000009462	rbm19	100	57.233	ENSCJAG00000009798	RBM19	99	56.302	Callithrix_jacchus
ENSGACG00000009462	rbm19	100	56.600	ENSCAFG00000009146	RBM19	98	55.119	Canis_familiaris
ENSGACG00000009462	rbm19	100	56.705	ENSCAFG00020017862	RBM19	98	55.222	Canis_lupus_dingo
ENSGACG00000009462	rbm19	100	56.902	ENSCHIG00000014917	RBM19	99	56.120	Capra_hircus
ENSGACG00000009462	rbm19	93	55.057	ENSTSYG00000007207	RBM19	96	56.393	Carlito_syrichta
ENSGACG00000009462	rbm19	99	58.779	ENSCAPG00000006869	RBM19	98	57.895	Cavia_aperea
ENSGACG00000009462	rbm19	100	59.140	ENSCPOG00000026629	RBM19	99	58.458	Cavia_porcellus
ENSGACG00000009462	rbm19	100	57.233	ENSCCAG00000021665	-	99	56.437	Cebus_capucinus
ENSGACG00000009462	rbm19	87	50.598	ENSCCAG00000026637	-	99	51.758	Cebus_capucinus
ENSGACG00000009462	rbm19	99	56.809	ENSCATG00000035841	RBM19	99	55.649	Cercocebus_atys
ENSGACG00000009462	rbm19	100	57.247	ENSCLAG00000009965	RBM19	99	56.012	Chinchilla_lanigera
ENSGACG00000009462	rbm19	100	69.951	ENSCSAG00000002352	RBM19	88	69.951	Chlorocebus_sabaeus
ENSGACG00000009462	rbm19	100	59.368	ENSCPBG00000011990	RBM19	97	60.294	Chrysemys_picta_bellii
ENSGACG00000009462	rbm19	83	52.214	ENSCING00000023076	-	100	51.403	Ciona_intestinalis
ENSGACG00000009462	rbm19	100	57.595	ENSCANG00000035927	RBM19	97	58.562	Colobus_angolensis_palliatus
ENSGACG00000009462	rbm19	100	57.598	ENSCGRG00001000323	Rbm19	99	56.681	Cricetulus_griseus_chok1gshd
ENSGACG00000009462	rbm19	100	57.598	ENSCGRG00000010371	Rbm19	99	56.681	Cricetulus_griseus_crigri
ENSGACG00000009462	rbm19	100	75.996	ENSCSEG00000017436	rbm19	99	75.858	Cynoglossus_semilaevis
ENSGACG00000009462	rbm19	100	75.082	ENSCVAG00000000300	rbm19	99	76.451	Cyprinodon_variegatus
ENSGACG00000009462	rbm19	99	66.202	ENSDARG00000042590	rbm19	99	66.415	Danio_rerio
ENSGACG00000009462	rbm19	100	56.931	ENSDNOG00000024534	RBM19	94	57.188	Dasypus_novemcinctus
ENSGACG00000009462	rbm19	99	56.702	ENSDORG00000008549	Rbm19	100	56.667	Dipodomys_ordii
ENSGACG00000009462	rbm19	99	37.726	FBgn0036018	CG3335	96	37.792	Drosophila_melanogaster
ENSGACG00000009462	rbm19	58	78.261	ENSETEG00000016887	-	56	77.941	Echinops_telfairi
ENSGACG00000009462	rbm19	92	44.025	ENSEBUG00000008521	-	94	44.304	Eptatretus_burgeri
ENSGACG00000009462	rbm19	100	56.054	ENSEASG00005009452	RBM19	99	55.728	Equus_asinus_asinus
ENSGACG00000009462	rbm19	100	55.882	ENSECAG00000023716	RBM19	99	56.367	Equus_caballus
ENSGACG00000009462	rbm19	100	71.460	ENSELUG00000012561	rbm19	99	70.550	Esox_lucius
ENSGACG00000009462	rbm19	100	55.370	ENSFCAG00000002962	RBM19	98	55.892	Felis_catus
ENSGACG00000009462	rbm19	100	59.529	ENSFALG00000007768	RBM19	99	57.158	Ficedula_albicollis
ENSGACG00000009462	rbm19	100	57.340	ENSFDAG00000004629	RBM19	99	55.962	Fukomys_damarensis
ENSGACG00000009462	rbm19	100	74.782	ENSFHEG00000012578	rbm19	99	75.599	Fundulus_heteroclitus
ENSGACG00000009462	rbm19	100	69.902	ENSGMOG00000013120	rbm19	100	69.902	Gadus_morhua
ENSGACG00000009462	rbm19	100	57.487	ENSGALG00000008289	RBM19	99	57.217	Gallus_gallus
ENSGACG00000009462	rbm19	100	76.284	ENSGAFG00000012337	rbm19	99	76.772	Gambusia_affinis
ENSGACG00000009462	rbm19	61	67.736	ENSGAGG00000019457	RBM19	99	64.615	Gopherus_agassizii
ENSGACG00000009462	rbm19	100	57.173	ENSGGOG00000007371	RBM19	99	56.715	Gorilla_gorilla
ENSGACG00000009462	rbm19	100	75.437	ENSHBUG00000009047	rbm19	99	75.108	Haplochromis_burtoni
ENSGACG00000009462	rbm19	100	57.889	ENSHGLG00000010899	RBM19	99	56.440	Heterocephalus_glaber_female
ENSGACG00000009462	rbm19	100	57.489	ENSHGLG00100017936	RBM19	99	55.751	Heterocephalus_glaber_male
ENSGACG00000009462	rbm19	100	76.387	ENSHCOG00000016446	rbm19	99	75.135	Hippocampus_comes
ENSGACG00000009462	rbm19	100	65.278	ENSIPUG00000023849	rbm19	99	65.778	Ictalurus_punctatus
ENSGACG00000009462	rbm19	100	78.261	ENSKMAG00000014807	rbm19	99	77.465	Kryptolebias_marmoratus
ENSGACG00000009462	rbm19	100	80.459	ENSLBEG00000012897	rbm19	99	79.978	Labrus_bergylta
ENSGACG00000009462	rbm19	73	58.652	ENSLACG00000012030	RBM19	100	58.615	Latimeria_chalumnae
ENSGACG00000009462	rbm19	100	65.027	ENSLOCG00000008341	rbm19	99	65.139	Lepisosteus_oculatus
ENSGACG00000009462	rbm19	92	56.410	ENSLAFG00000004187	RBM19	100	55.968	Loxodonta_africana
ENSGACG00000009462	rbm19	100	57.442	ENSMFAG00000046091	RBM19	99	54.375	Macaca_fascicularis
ENSGACG00000009462	rbm19	100	57.547	ENSMMUG00000010496	RBM19	97	58.457	Macaca_mulatta
ENSGACG00000009462	rbm19	100	53.003	ENSMNEG00000028452	RBM19	99	55.711	Macaca_nemestrina
ENSGACG00000009462	rbm19	100	55.672	ENSMLEG00000034550	RBM19	98	54.759	Mandrillus_leucophaeus
ENSGACG00000009462	rbm19	100	82.186	ENSMAMG00000014397	rbm19	99	81.887	Mastacembelus_armatus
ENSGACG00000009462	rbm19	100	78.517	ENSMZEG00005016607	rbm19	99	77.586	Maylandia_zebra
ENSGACG00000009462	rbm19	99	50.377	ENSMGAG00000010087	RBM19	99	51.525	Meleagris_gallopavo
ENSGACG00000009462	rbm19	100	58.199	ENSMAUG00000019290	Rbm19	99	57.068	Mesocricetus_auratus
ENSGACG00000009462	rbm19	100	56.531	ENSMICG00000014423	RBM19	99	56.282	Microcebus_murinus
ENSGACG00000009462	rbm19	100	77.356	ENSMMOG00000017839	rbm19	99	76.078	Mola_mola
ENSGACG00000009462	rbm19	100	57.188	ENSMODG00000003597	RBM19	99	58.369	Monodelphis_domestica
ENSGACG00000009462	rbm19	100	79.781	ENSMALG00000012647	rbm19	99	78.610	Monopterus_albus
ENSGACG00000009462	rbm19	100	59.149	MGP_CAROLIEiJ_G0027656	Rbm19	99	57.596	Mus_caroli
ENSGACG00000009462	rbm19	100	58.668	ENSMUSG00000029594	Rbm19	99	57.692	Mus_musculus
ENSGACG00000009462	rbm19	100	57.745	MGP_PahariEiJ_G0024238	Rbm19	99	57.644	Mus_pahari
ENSGACG00000009462	rbm19	100	58.466	MGP_SPRETEiJ_G0028656	Rbm19	97	59.448	Mus_spretus
ENSGACG00000009462	rbm19	100	55.556	ENSMPUG00000002694	RBM19	98	55.864	Mustela_putorius_furo
ENSGACG00000009462	rbm19	100	56.276	ENSMLUG00000015075	RBM19	99	56.167	Myotis_lucifugus
ENSGACG00000009462	rbm19	100	56.931	ENSNGAG00000009076	Rbm19	99	56.785	Nannospalax_galili
ENSGACG00000009462	rbm19	100	78.251	ENSNBRG00000005913	rbm19	98	78.057	Neolamprologus_brichardi
ENSGACG00000009462	rbm19	100	56.572	ENSNLEG00000000190	RBM19	99	55.828	Nomascus_leucogenys
ENSGACG00000009462	rbm19	93	59.606	ENSMEUG00000004045	RBM19	92	55.745	Notamacropus_eugenii
ENSGACG00000009462	rbm19	100	56.237	ENSOPRG00000012064	RBM19	97	57.973	Ochotona_princeps
ENSGACG00000009462	rbm19	100	57.374	ENSODEG00000012977	RBM19	99	57.431	Octodon_degus
ENSGACG00000009462	rbm19	100	77.658	ENSONIG00000013576	rbm19	99	79.637	Oreochromis_niloticus
ENSGACG00000009462	rbm19	100	56.840	ENSOCUG00000009398	RBM19	99	56.054	Oryctolagus_cuniculus
ENSGACG00000009462	rbm19	100	77.742	ENSORLG00000008077	rbm19	99	77.416	Oryzias_latipes
ENSGACG00000009462	rbm19	100	77.297	ENSORLG00020013187	rbm19	99	77.405	Oryzias_latipes_hni
ENSGACG00000009462	rbm19	100	77.693	ENSORLG00015001774	rbm19	99	76.724	Oryzias_latipes_hsok
ENSGACG00000009462	rbm19	100	78.603	ENSOMEG00000003334	rbm19	99	76.699	Oryzias_melastigma
ENSGACG00000009462	rbm19	92	54.442	ENSOGAG00000000602	RBM19	100	55.454	Otolemur_garnettii
ENSGACG00000009462	rbm19	100	56.646	ENSOARG00000006827	RBM19	99	57.083	Ovis_aries
ENSGACG00000009462	rbm19	100	56.934	ENSPPAG00000043712	RBM19	99	57.172	Pan_paniscus
ENSGACG00000009462	rbm19	100	55.696	ENSPPRG00000023027	RBM19	98	55.705	Panthera_pardus
ENSGACG00000009462	rbm19	100	52.910	ENSPTIG00000011096	RBM19	99	53.390	Panthera_tigris_altaica
ENSGACG00000009462	rbm19	100	56.934	ENSPTRG00000005494	RBM19	99	57.172	Pan_troglodytes
ENSGACG00000009462	rbm19	100	56.813	ENSPANG00000004795	RBM19	92	61.189	Papio_anubis
ENSGACG00000009462	rbm19	100	65.468	ENSPKIG00000017095	rbm19	99	65.435	Paramormyrops_kingsleyae
ENSGACG00000009462	rbm19	92	57.224	ENSPSIG00000008191	RBM19	99	58.391	Pelodiscus_sinensis
ENSGACG00000009462	rbm19	89	75.873	ENSPMGG00000019087	rbm19	100	71.512	Periophthalmus_magnuspinnatus
ENSGACG00000009462	rbm19	100	57.021	ENSPEMG00000018058	Rbm19	99	56.322	Peromyscus_maniculatus_bairdii
ENSGACG00000009462	rbm19	100	58.051	ENSPCIG00000028861	RBM19	99	56.802	Phascolarctos_cinereus
ENSGACG00000009462	rbm19	100	76.004	ENSPFOG00000015300	rbm19	99	76.782	Poecilia_formosa
ENSGACG00000009462	rbm19	100	76.739	ENSPLAG00000000059	rbm19	99	77.622	Poecilia_latipinna
ENSGACG00000009462	rbm19	100	76.304	ENSPMEG00000018585	rbm19	99	77.189	Poecilia_mexicana
ENSGACG00000009462	rbm19	100	77.972	ENSPREG00000000978	rbm19	99	77.959	Poecilia_reticulata
ENSGACG00000009462	rbm19	100	55.626	ENSPPYG00000004993	RBM19	99	55.269	Pongo_abelii
ENSGACG00000009462	rbm19	67	63.547	ENSPCAG00000005063	-	56	63.547	Procavia_capensis
ENSGACG00000009462	rbm19	100	56.902	ENSPCOG00000016190	RBM19	99	56.360	Propithecus_coquereli
ENSGACG00000009462	rbm19	100	56.230	ENSPVAG00000011618	RBM19	99	55.510	Pteropus_vampyrus
ENSGACG00000009462	rbm19	99	77.214	ENSPNYG00000017434	rbm19	99	77.646	Pundamilia_nyererei
ENSGACG00000009462	rbm19	100	66.129	ENSPNAG00000012069	rbm19	99	66.129	Pygocentrus_nattereri
ENSGACG00000009462	rbm19	100	58.431	ENSRNOG00000001397	Rbm19	97	58.448	Rattus_norvegicus
ENSGACG00000009462	rbm19	100	57.834	ENSRBIG00000041419	RBM19	99	56.037	Rhinopithecus_bieti
ENSGACG00000009462	rbm19	100	57.474	ENSRROG00000031938	RBM19	99	56.760	Rhinopithecus_roxellana
ENSGACG00000009462	rbm19	91	48.783	ENSSBOG00000022679	-	99	49.026	Saimiri_boliviensis_boliviensis
ENSGACG00000009462	rbm19	100	55.079	ENSSBOG00000021434	-	99	54.029	Saimiri_boliviensis_boliviensis
ENSGACG00000009462	rbm19	100	59.027	ENSSHAG00000012256	RBM19	99	57.052	Sarcophilus_harrisii
ENSGACG00000009462	rbm19	100	61.677	ENSSFOG00015005124	rbm19	99	62.128	Scleropages_formosus
ENSGACG00000009462	rbm19	100	81.650	ENSSMAG00000011828	rbm19	99	81.553	Scophthalmus_maximus
ENSGACG00000009462	rbm19	100	83.188	ENSSDUG00000013544	rbm19	99	81.553	Seriola_dumerili
ENSGACG00000009462	rbm19	89	86.190	ENSSLDG00000025413	rbm19	99	75.682	Seriola_lalandi_dorsalis
ENSGACG00000009462	rbm19	63	64.716	ENSSPUG00000011064	RBM19	98	65.625	Sphenodon_punctatus
ENSGACG00000009462	rbm19	100	77.705	ENSSPAG00000018685	rbm19	98	78.499	Stegastes_partitus
ENSGACG00000009462	rbm19	100	57.294	ENSSSCG00000009868	RBM19	99	56.799	Sus_scrofa
ENSGACG00000009462	rbm19	100	58.360	ENSTGUG00000009017	RBM19	99	56.394	Taeniopygia_guttata
ENSGACG00000009462	rbm19	100	74.705	ENSTRUG00000016032	rbm19	99	73.890	Takifugu_rubripes
ENSGACG00000009462	rbm19	77	67.742	ENSTBEG00000000703	RBM19	76	67.742	Tupaia_belangeri
ENSGACG00000009462	rbm19	85	58.273	ENSTTRG00000003987	RBM19	82	59.420	Tursiops_truncatus
ENSGACG00000009462	rbm19	99	55.415	ENSUAMG00000002076	RBM19	98	55.858	Ursus_americanus
ENSGACG00000009462	rbm19	100	55.937	ENSUMAG00000010816	RBM19	99	56.198	Ursus_maritimus
ENSGACG00000009462	rbm19	100	56.873	ENSVVUG00000007886	RBM19	98	55.682	Vulpes_vulpes
ENSGACG00000009462	rbm19	100	56.699	ENSXETG00000017668	rbm19	99	55.710	Xenopus_tropicalis
ENSGACG00000009462	rbm19	100	75.970	ENSXCOG00000016995	rbm19	99	75.722	Xiphophorus_couchianus
ENSGACG00000009462	rbm19	100	77.451	ENSXMAG00000007641	rbm19	99	77.681	Xiphophorus_maculatus