EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGACG00000009663 (Gene tree)
Gene ID
-
Gene Symbol
apobec2b
Alias
apo2b
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide-like 2b
Gene Type
protein_coding
Species
Gasterosteus_aculeatus
Status
putative
Strand
Plus strand
Length
1696 bases
Position
chrgroupXII:12004007-12005702
Accession
ZDB-GENE-090618-1
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGACP00000012752APOBEC_NPF08210.115.7e-4611
ENSGACP00000012755APOBEC_NPF08210.117.4e-4611
ENSGACP00000012752APOBEC_CPF05240.141.1e-2511
ENSGACP00000012755APOBEC_CPF05240.141.4e-2511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGACT00000012779-747-ENSGACP00000012755248 (aa)-G3P582
ENSGACT00000012776-900-ENSGACP00000012752224 (aa)-G3P579
Gene Model
Click here to download ENSGACG00000009663's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000009663's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGACG00000009663apobec2b8359.043ENSGACG00000011671apobec2a10059.043
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGACG00000009663apobec2b8358.031ENSG00000124701APOBEC28658.031Homo_sapiens
ENSGACG00000009663apobec2b9984.305ENSAPOG00000019390apobec2b10076.119Acanthochromis_polyacanthus
ENSGACG00000009663apobec2b7755.556ENSAMEG00000004467APOBEC27155.556Ailuropoda_melanoleuca
ENSGACG00000009663apobec2b9684.259ENSACIG00000002472APOBEC210080.242Amphilophus_citrinellus
ENSGACG00000009663apobec2b10048.908ENSACIG00000016370apobec2a7653.846Amphilophus_citrinellus
ENSGACG00000009663apobec2b9985.202ENSAOCG00000023355apobec2b10076.866Amphiprion_ocellaris
ENSGACG00000009663apobec2b9953.755ENSAOCG00000003291apobec2a9950.588Amphiprion_ocellaris
ENSGACG00000009663apobec2b9953.846ENSAPEG00000003630apobec2a9950.980Amphiprion_percula
ENSGACG00000009663apobec2b9984.305ENSAPEG00000004591apobec2b10076.119Amphiprion_percula
ENSGACG00000009663apobec2b10050.588ENSATEG00000000956apobec2a9857.714Anabas_testudineus
ENSGACG00000009663apobec2b9985.135ENSATEG00000023043APOBEC210077.323Anabas_testudineus
ENSGACG00000009663apobec2b9750.446ENSAPLG00000002895APOBEC28355.851Anas_platyrhynchos
ENSGACG00000009663apobec2b9048.309ENSACAG00000016506APOBEC29552.809Anolis_carolinensis
ENSGACG00000009663apobec2b8357.513ENSANAG00000026993APOBEC28657.513Aotus_nancymaae
ENSGACG00000009663apobec2b9684.259ENSACLG00000007634APOBEC210075.746Astatotilapia_calliptera
ENSGACG00000009663apobec2b7758.140ENSACLG00000026736-9758.140Astatotilapia_calliptera
ENSGACG00000009663apobec2b9659.009ENSAMXG00000015966apobec2b8556.967Astyanax_mexicanus
ENSGACG00000009663apobec2b9254.245ENSAMXG00000042992apobec2a7559.162Astyanax_mexicanus
ENSGACG00000009663apobec2b8955.769ENSBTAG00000005974APOBEC26258.031Bos_taurus
ENSGACG00000009663apobec2b8357.513ENSCJAG00000004063APOBEC28657.513Callithrix_jacchus
ENSGACG00000009663apobec2b8357.513ENSCAFG00000001575APOBEC28657.513Canis_familiaris
ENSGACG00000009663apobec2b8357.513ENSCAFG00020008306APOBEC28657.513Canis_lupus_dingo
ENSGACG00000009663apobec2b8954.808ENSCHIG00000026348APOBEC28656.995Capra_hircus
ENSGACG00000009663apobec2b8358.031ENSTSYG00000008206APOBEC28558.031Carlito_syrichta
ENSGACG00000009663apobec2b8357.513ENSCAPG00000015084APOBEC28557.513Cavia_aperea
ENSGACG00000009663apobec2b8357.513ENSCPOG00000036103APOBEC28557.513Cavia_porcellus
ENSGACG00000009663apobec2b8357.513ENSCCAG00000033987APOBEC28657.513Cebus_capucinus
ENSGACG00000009663apobec2b8358.031ENSCATG00000010691APOBEC28658.031Cercocebus_atys
ENSGACG00000009663apobec2b8358.031ENSCLAG00000013817APOBEC28558.031Chinchilla_lanigera
ENSGACG00000009663apobec2b8358.031ENSCSAG00000011177APOBEC28658.031Chlorocebus_sabaeus
ENSGACG00000009663apobec2b7756.111ENSCHOG00000008930APOBEC210056.111Choloepus_hoffmanni
ENSGACG00000009663apobec2b8056.216ENSCPBG00000017469APOBEC28556.452Chrysemys_picta_bellii
ENSGACG00000009663apobec2b8358.031ENSCANG00000035072APOBEC28658.031Colobus_angolensis_palliatus
ENSGACG00000009663apobec2b8356.995ENSCGRG00001014983Apobec28656.995Cricetulus_griseus_chok1gshd
ENSGACG00000009663apobec2b8356.995ENSCGRG00000007835Apobec28656.995Cricetulus_griseus_crigri
ENSGACG00000009663apobec2b8476.596ENSCSEG00000000690-10063.670Cynoglossus_semilaevis
ENSGACG00000009663apobec2b10050.000ENSCSEG00000020201apobec2a10050.000Cynoglossus_semilaevis
ENSGACG00000009663apobec2b9979.821ENSCVAG00000012342apobec2b10071.805Cyprinodon_variegatus
ENSGACG00000009663apobec2b9860.889ENSDARG00000113992apobec2b8958.025Danio_rerio
ENSGACG00000009663apobec2b10055.253ENSDARG00000018881apobec2a9456.031Danio_rerio
ENSGACG00000009663apobec2b8342.132ENSDNOG00000033914APOBEC28641.872Dasypus_novemcinctus
ENSGACG00000009663apobec2b8356.477ENSDORG00000006447Apobec28456.477Dipodomys_ordii
ENSGACG00000009663apobec2b8356.995ENSETEG00000000624APOBEC28456.995Echinops_telfairi
ENSGACG00000009663apobec2b7057.143ENSEASG00005002937APOBEC28457.143Equus_asinus_asinus
ENSGACG00000009663apobec2b8357.513ENSECAG00000006576APOBEC28657.513Equus_caballus
ENSGACG00000009663apobec2b8358.549ENSEEUG00000006046APOBEC28658.549Erinaceus_europaeus
ENSGACG00000009663apobec2b8361.905ENSELUG00000003736apobec2a6762.304Esox_lucius
ENSGACG00000009663apobec2b8357.513ENSFCAG00000004108APOBEC28657.513Felis_catus
ENSGACG00000009663apobec2b8147.872ENSFALG00000003910APOBEC28347.872Ficedula_albicollis
ENSGACG00000009663apobec2b8357.513ENSFDAG00000006015APOBEC28657.513Fukomys_damarensis
ENSGACG00000009663apobec2b9583.491ENSFHEG00000005492apobec2b10076.613Fundulus_heteroclitus
ENSGACG00000009663apobec2b7759.091ENSGMOG00000007028apobec2a10059.091Gadus_morhua
ENSGACG00000009663apobec2b9271.014ENSGMOG00000006819apobec2b10065.600Gadus_morhua
ENSGACG00000009663apobec2b9650.455ENSGALG00000003226APOBEC28555.026Gallus_gallus
ENSGACG00000009663apobec2b9584.038ENSGAFG00000007634apobec2b8772.932Gambusia_affinis
ENSGACG00000009663apobec2b8056.216ENSGAGG00000010347APOBEC28955.330Gopherus_agassizii
ENSGACG00000009663apobec2b8358.031ENSGGOG00000001099APOBEC28458.031Gorilla_gorilla
ENSGACG00000009663apobec2b9682.870ENSHBUG00000005993apobec2b10074.627Haplochromis_burtoni
ENSGACG00000009663apobec2b9953.414ENSHBUG00000015890apobec2a9953.414Haplochromis_burtoni
ENSGACG00000009663apobec2b8955.024ENSHGLG00000017169APOBEC28556.995Heterocephalus_glaber_female
ENSGACG00000009663apobec2b8955.024ENSHGLG00100019442APOBEC28556.995Heterocephalus_glaber_male
ENSGACG00000009663apobec2b9953.138ENSHCOG00000020319apobec2a7858.421Hippocampus_comes
ENSGACG00000009663apobec2b9978.448ENSHCOG00000002712APOBEC210074.060Hippocampus_comes
ENSGACG00000009663apobec2b9555.505ENSIPUG00000017355apobec2a7150.198Ictalurus_punctatus
ENSGACG00000009663apobec2b10056.296ENSIPUG00000013784Apobec210056.296Ictalurus_punctatus
ENSGACG00000009663apobec2b8358.549ENSSTOG00000023643APOBEC28658.549Ictidomys_tridecemlineatus
ENSGACG00000009663apobec2b8356.995ENSJJAG00000009733Apobec28656.995Jaculus_jaculus
ENSGACG00000009663apobec2b9977.477ENSKMAG00000020631apobec2b9969.057Kryptolebias_marmoratus
ENSGACG00000009663apobec2b10083.482ENSLBEG00000009422-10074.286Labrus_bergylta
ENSGACG00000009663apobec2b9954.348ENSLBEG00000025214apobec2a10052.381Labrus_bergylta
ENSGACG00000009663apobec2b9657.604ENSLACG00000015985APOBEC28262.766Latimeria_chalumnae
ENSGACG00000009663apobec2b8862.687ENSLOCG00000012415apobec2b8656.846Lepisosteus_oculatus
ENSGACG00000009663apobec2b8956.250ENSLAFG00000016563APOBEC28658.549Loxodonta_africana
ENSGACG00000009663apobec2b8358.031ENSMFAG00000044645APOBEC28658.031Macaca_fascicularis
ENSGACG00000009663apobec2b8358.031ENSMMUG00000021171APOBEC28658.031Macaca_mulatta
ENSGACG00000009663apobec2b8358.031ENSMNEG00000045497APOBEC28658.031Macaca_nemestrina
ENSGACG00000009663apobec2b8358.031ENSMLEG00000028328APOBEC28658.031Mandrillus_leucophaeus
ENSGACG00000009663apobec2b9985.068ENSMAMG00000007926APOBEC210075.735Mastacembelus_armatus
ENSGACG00000009663apobec2b9854.656ENSMAMG00000023685apobec2a9652.632Mastacembelus_armatus
ENSGACG00000009663apobec2b8960.294ENSMZEG00005005240-9357.432Maylandia_zebra
ENSGACG00000009663apobec2b9983.857ENSMZEG00005027159APOBEC210076.493Maylandia_zebra
ENSGACG00000009663apobec2b9950.439ENSMGAG00000010173APOBEC29453.073Meleagris_gallopavo
ENSGACG00000009663apobec2b8357.513ENSMAUG00000011016Apobec28657.513Mesocricetus_auratus
ENSGACG00000009663apobec2b8358.549ENSMICG00000043339APOBEC28658.549Microcebus_murinus
ENSGACG00000009663apobec2b8357.513ENSMOCG00000001904Apobec28657.513Microtus_ochrogaster
ENSGACG00000009663apobec2b9682.407ENSMMOG00000008681apobec2b10072.624Mola_mola
ENSGACG00000009663apobec2b9252.336ENSMODG00000013090APOBEC28755.208Monodelphis_domestica
ENSGACG00000009663apobec2b10070.301ENSMALG00000013779APOBEC210071.805Monopterus_albus
ENSGACG00000009663apobec2b10050.400ENSMALG00000020523apobec2a10049.603Monopterus_albus
ENSGACG00000009663apobec2b8356.995MGP_CAROLIEiJ_G0021727Apobec28656.995Mus_caroli
ENSGACG00000009663apobec2b8356.995ENSMUSG00000040694Apobec28656.995Mus_musculus
ENSGACG00000009663apobec2b8356.995MGP_PahariEiJ_G0020716Apobec28656.995Mus_pahari
ENSGACG00000009663apobec2b8358.549ENSMPUG00000013691APOBEC28358.549Mustela_putorius_furo
ENSGACG00000009663apobec2b8356.995ENSMLUG00000011327APOBEC28456.995Myotis_lucifugus
ENSGACG00000009663apobec2b8356.477ENSNGAG00000013717Apobec28656.477Nannospalax_galili
ENSGACG00000009663apobec2b9683.796ENSNBRG00000018806apobec2b8975.373Neolamprologus_brichardi
ENSGACG00000009663apobec2b9952.632ENSNBRG00000021776apobec2a9951.822Neolamprologus_brichardi
ENSGACG00000009663apobec2b8358.031ENSNLEG00000005057APOBEC28658.031Nomascus_leucogenys
ENSGACG00000009663apobec2b8355.729ENSMEUG00000011623APOBEC28755.729Notamacropus_eugenii
ENSGACG00000009663apobec2b9354.630ENSOPRG00000014808APOBEC28558.031Ochotona_princeps
ENSGACG00000009663apobec2b8357.513ENSODEG00000016183APOBEC28457.513Octodon_degus
ENSGACG00000009663apobec2b9857.848ENSONIG00000004644-9954.217Oreochromis_niloticus
ENSGACG00000009663apobec2b9685.648ENSONIG00000012289apobec2b10076.866Oreochromis_niloticus
ENSGACG00000009663apobec2b7454.706ENSOANG00000000824APOBEC29853.889Ornithorhynchus_anatinus
ENSGACG00000009663apobec2b9354.630ENSOCUG00000028008APOBEC28558.031Oryctolagus_cuniculus
ENSGACG00000009663apobec2b9954.183ENSORLG00000010752apobec2a8360.714Oryzias_latipes
ENSGACG00000009663apobec2b9981.614ENSORLG00000022372APOBEC210074.436Oryzias_latipes
ENSGACG00000009663apobec2b9981.614ENSORLG00020006164APOBEC210074.436Oryzias_latipes_hni
ENSGACG00000009663apobec2b9954.183ENSORLG00020004153apobec2a8360.714Oryzias_latipes_hni
ENSGACG00000009663apobec2b9954.183ENSORLG00015021781apobec2a8360.714Oryzias_latipes_hsok
ENSGACG00000009663apobec2b9979.565ENSORLG00015022089-10074.436Oryzias_latipes_hsok
ENSGACG00000009663apobec2b9981.614ENSOMEG00000015449APOBEC210077.823Oryzias_melastigma
ENSGACG00000009663apobec2b9954.468ENSOMEG00000001311apobec2a8259.694Oryzias_melastigma
ENSGACG00000009663apobec2b8358.031ENSOGAG00000002632APOBEC28658.031Otolemur_garnettii
ENSGACG00000009663apobec2b8955.288ENSOARG00000000820APOBEC28657.513Ovis_aries
ENSGACG00000009663apobec2b8358.031ENSPPAG00000035598APOBEC28458.031Pan_paniscus
ENSGACG00000009663apobec2b8357.513ENSPPRG00000008530APOBEC28657.513Panthera_pardus
ENSGACG00000009663apobec2b8357.513ENSPTIG00000011084APOBEC28657.513Panthera_tigris_altaica
ENSGACG00000009663apobec2b8358.031ENSPTRG00000029679APOBEC28458.031Pan_troglodytes
ENSGACG00000009663apobec2b8358.031ENSPANG00000007121APOBEC28658.031Papio_anubis
ENSGACG00000009663apobec2b9263.942ENSPKIG00000004741apobec2b6867.553Paramormyrops_kingsleyae
ENSGACG00000009663apobec2b9955.508ENSPKIG00000005395apobec2a8062.245Paramormyrops_kingsleyae
ENSGACG00000009663apobec2b8057.297ENSPSIG00000013480APOBEC28257.527Pelodiscus_sinensis
ENSGACG00000009663apobec2b9978.733ENSPMGG00000002686APOBEC27372.874Periophthalmus_magnuspinnatus
ENSGACG00000009663apobec2b10054.800ENSPMGG00000004044apobec2a9953.968Periophthalmus_magnuspinnatus
ENSGACG00000009663apobec2b8357.513ENSPEMG00000005724Apobec28657.513Peromyscus_maniculatus_bairdii
ENSGACG00000009663apobec2b9981.250ENSPFOG00000001216apobec2b10073.308Poecilia_formosa
ENSGACG00000009663apobec2b9980.804ENSPLAG00000002074apobec2b10076.707Poecilia_latipinna
ENSGACG00000009663apobec2b9584.038ENSPMEG00000017537apobec2b10072.932Poecilia_mexicana
ENSGACG00000009663apobec2b9584.507ENSPREG00000020060apobec2b8773.684Poecilia_reticulata
ENSGACG00000009663apobec2b8357.513ENSPPYG00000016586APOBEC28657.513Pongo_abelii
ENSGACG00000009663apobec2b8259.162ENSPCAG00000011433APOBEC210059.162Procavia_capensis
ENSGACG00000009663apobec2b8358.549ENSPCOG00000026935APOBEC28658.549Propithecus_coquereli
ENSGACG00000009663apobec2b8358.031ENSPVAG00000008316APOBEC28658.031Pteropus_vampyrus
ENSGACG00000009663apobec2b9684.722ENSPNYG00000016747apobec2b10076.119Pundamilia_nyererei
ENSGACG00000009663apobec2b9262.085ENSPNAG00000013666apobec2b7164.975Pygocentrus_nattereri
ENSGACG00000009663apobec2b9853.012ENSPNAG00000010382apobec2a7163.102Pygocentrus_nattereri
ENSGACG00000009663apobec2b8356.995ENSRNOG00000012303Apobec28656.995Rattus_norvegicus
ENSGACG00000009663apobec2b8358.031ENSRBIG00000044756APOBEC28658.031Rhinopithecus_bieti
ENSGACG00000009663apobec2b8358.031ENSRROG00000030082APOBEC28658.031Rhinopithecus_roxellana
ENSGACG00000009663apobec2b8357.513ENSSBOG00000028496APOBEC28657.513Saimiri_boliviensis_boliviensis
ENSGACG00000009663apobec2b8356.771ENSSHAG00000017771APOBEC28656.771Sarcophilus_harrisii
ENSGACG00000009663apobec2b7554.438ENSSFOG00015005437-7154.438Scleropages_formosus
ENSGACG00000009663apobec2b9664.977ENSSFOG00015022920apobec26870.213Scleropages_formosus
ENSGACG00000009663apobec2b8787.629ENSSMAG00000005110APOBEC210072.000Scophthalmus_maximus
ENSGACG00000009663apobec2b9954.148ENSSMAG00000001011apobec2a5759.896Scophthalmus_maximus
ENSGACG00000009663apobec2b10052.549ENSSDUG00000007013apobec2a10051.765Seriola_dumerili
ENSGACG00000009663apobec2b9689.815ENSSDUG00000014543apobec2b10078.358Seriola_dumerili
ENSGACG00000009663apobec2b9689.815ENSSLDG00000003321apobec2b10078.358Seriola_lalandi_dorsalis
ENSGACG00000009663apobec2b10053.125ENSSLDG00000020199apobec2a10050.787Seriola_lalandi_dorsalis
ENSGACG00000009663apobec2b7751.111ENSSPUG00000010839APOBEC28751.111Sphenodon_punctatus
ENSGACG00000009663apobec2b10052.381ENSSPAG00000016299-10052.381Stegastes_partitus
ENSGACG00000009663apobec2b9986.547ENSSPAG00000005253apobec2b10078.358Stegastes_partitus
ENSGACG00000009663apobec2b8955.769ENSSSCG00000036018APOBEC28658.031Sus_scrofa
ENSGACG00000009663apobec2b8155.319ENSTGUG00000018533APOBEC28555.319Taeniopygia_guttata
ENSGACG00000009663apobec2b10051.587ENSTRUG00000009123apobec2a10052.381Takifugu_rubripes
ENSGACG00000009663apobec2b9977.027ENSTRUG00000012839apobec2b10069.962Takifugu_rubripes
ENSGACG00000009663apobec2b9979.279ENSTNIG00000015038apobec2b10071.483Tetraodon_nigroviridis
ENSGACG00000009663apobec2b8358.031ENSTBEG00000003553APOBEC28658.031Tupaia_belangeri
ENSGACG00000009663apobec2b8257.368ENSTTRG00000013392APOBEC28557.368Tursiops_truncatus
ENSGACG00000009663apobec2b8358.549ENSUAMG00000027667APOBEC28558.549Ursus_americanus
ENSGACG00000009663apobec2b8357.513ENSVVUG00000026617APOBEC28657.513Vulpes_vulpes
ENSGACG00000009663apobec2b9848.511ENSXETG00000008007apobec28951.659Xenopus_tropicalis
ENSGACG00000009663apobec2b9580.645ENSXCOG00000007398apobec2b10073.810Xiphophorus_couchianus
ENSGACG00000009663apobec2b9581.106ENSXMAG00000008134apobec2b10070.370Xiphophorus_maculatus

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