EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000009670 (Gene tree)
Gene ID: -
Gene Symbol: pum2
Alias: si:ch1073-351m12.1
Full Name: pumilio RNA-binding family member 2
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 8678 bases
Position: chrgroupXVIII:9373083-9381760
Accession: ZDB-GENE-081031-76
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000012762	PUF	PF00806.19	4e-70	1	7
ENSGACP00000012762	PUF	PF00806.19	4e-70	2	7
ENSGACP00000012762	PUF	PF00806.19	4e-70	3	7
ENSGACP00000012762	PUF	PF00806.19	4e-70	4	7
ENSGACP00000012762	PUF	PF00806.19	4e-70	5	7
ENSGACP00000012762	PUF	PF00806.19	4e-70	6	7
ENSGACP00000012762	PUF	PF00806.19	4e-70	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000012786	-	3213	-	ENSGACP00000012762	1071 (aa)	-	G3P589

Gene Model

Click here to download ENSGACG00000009670's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000009670's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000009670	pum2	100	62.580	ENSGACG00000005717	pum1	92	64.004

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000009670	pum2	100	74.770	ENSG00000055917	PUM2	100	76.471	Homo_sapiens
ENSGACG00000009670	pum2	100	74.265	ENSAMEG00000002823	PUM2	100	73.475	Ailuropoda_melanoleuca
ENSGACG00000009670	pum2	90	98.950	ENSACIG00000010646	pum2	99	94.583	Amphilophus_citrinellus
ENSGACG00000009670	pum2	98	90.172	ENSAOCG00000016619	pum2	88	90.798	Amphiprion_ocellaris
ENSGACG00000009670	pum2	100	92.372	ENSAPEG00000019924	pum2	90	92.365	Amphiprion_percula
ENSGACG00000009670	pum2	100	90.605	ENSATEG00000015030	pum2	90	91.155	Anabas_testudineus
ENSGACG00000009670	pum2	100	73.543	ENSAPLG00000010496	PUM2	90	72.988	Anas_platyrhynchos
ENSGACG00000009670	pum2	100	73.796	ENSACAG00000010491	PUM2	100	72.222	Anolis_carolinensis
ENSGACG00000009670	pum2	100	74.770	ENSANAG00000021807	PUM2	100	72.936	Aotus_nancymaae
ENSGACG00000009670	pum2	100	90.520	ENSACLG00000022532	pum2	89	91.349	Astatotilapia_calliptera
ENSGACG00000009670	pum2	100	74.057	ENSBTAG00000011155	PUM2	100	77.984	Bos_taurus
ENSGACG00000009670	pum2	100	74.494	ENSCJAG00000007450	PUM2	100	72.752	Callithrix_jacchus
ENSGACG00000009670	pum2	100	73.965	ENSCAFG00000003839	PUM2	100	73.080	Canis_familiaris
ENSGACG00000009670	pum2	100	73.144	ENSCAFG00020025689	PUM2	100	72.155	Canis_lupus_dingo
ENSGACG00000009670	pum2	100	74.057	ENSCHIG00000022180	PUM2	100	73.173	Capra_hircus
ENSGACG00000009670	pum2	100	73.573	ENSTSYG00000014463	PUM2	100	72.702	Carlito_syrichta
ENSGACG00000009670	pum2	99	87.550	ENSCAPG00000016888	PUM2	100	85.412	Cavia_aperea
ENSGACG00000009670	pum2	100	74.908	ENSCPOG00000031996	PUM2	100	73.641	Cavia_porcellus
ENSGACG00000009670	pum2	100	74.770	ENSCCAG00000037035	PUM2	100	72.936	Cebus_capucinus
ENSGACG00000009670	pum2	100	74.862	ENSCATG00000043826	PUM2	100	73.028	Cercocebus_atys
ENSGACG00000009670	pum2	100	75.322	ENSCLAG00000006048	PUM2	100	73.961	Chinchilla_lanigera
ENSGACG00000009670	pum2	100	74.862	ENSCSAG00000008087	PUM2	100	73.028	Chlorocebus_sabaeus
ENSGACG00000009670	pum2	71	72.462	ENSCHOG00000004575	PUM2	79	75.000	Choloepus_hoffmanni
ENSGACG00000009670	pum2	89	90.268	ENSCPBG00000019966	PUM2	100	84.279	Chrysemys_picta_bellii
ENSGACG00000009670	pum2	100	74.954	ENSCANG00000032797	PUM2	100	73.119	Colobus_angolensis_palliatus
ENSGACG00000009670	pum2	100	74.494	ENSCGRG00001025023	Pum2	100	72.569	Cricetulus_griseus_chok1gshd
ENSGACG00000009670	pum2	100	74.678	ENSCGRG00000001580	Pum2	100	72.752	Cricetulus_griseus_crigri
ENSGACG00000009670	pum2	100	90.410	ENSCSEG00000020899	pum2	90	90.392	Cynoglossus_semilaevis
ENSGACG00000009670	pum2	100	91.240	ENSCVAG00000002426	pum2	100	89.556	Cyprinodon_variegatus
ENSGACG00000009670	pum2	100	85.887	ENSDARG00000061040	pum2	90	85.595	Danio_rerio
ENSGACG00000009670	pum2	100	70.799	ENSDNOG00000006733	PUM2	99	70.074	Dasypus_novemcinctus
ENSGACG00000009670	pum2	100	69.917	ENSDORG00000011453	Pum2	100	69.437	Dipodomys_ordii
ENSGACG00000009670	pum2	81	90.391	ENSETEG00000017683	PUM2	79	90.391	Echinops_telfairi
ENSGACG00000009670	pum2	70	59.901	ENSEBUG00000014828	pum2	93	58.728	Eptatretus_burgeri
ENSGACG00000009670	pum2	95	59.693	ENSEBUG00000004435	pum2	96	58.761	Eptatretus_burgeri
ENSGACG00000009670	pum2	100	73.965	ENSEASG00005009429	PUM2	100	73.080	Equus_asinus_asinus
ENSGACG00000009670	pum2	100	73.965	ENSECAG00000021930	PUM2	100	77.674	Equus_caballus
ENSGACG00000009670	pum2	75	69.811	ENSEEUG00000003224	-	74	69.811	Erinaceus_europaeus
ENSGACG00000009670	pum2	100	87.142	ENSELUG00000014997	pum2	90	87.049	Esox_lucius
ENSGACG00000009670	pum2	100	73.873	ENSFCAG00000027520	PUM2	100	72.988	Felis_catus
ENSGACG00000009670	pum2	100	74.054	ENSFALG00000001759	PUM2	100	73.383	Ficedula_albicollis
ENSGACG00000009670	pum2	100	73.805	ENSFDAG00000019685	PUM2	100	72.995	Fukomys_damarensis
ENSGACG00000009670	pum2	100	88.608	ENSFHEG00000021596	pum2	90	87.862	Fundulus_heteroclitus
ENSGACG00000009670	pum2	100	88.632	ENSGMOG00000006903	pum2	100	88.355	Gadus_morhua
ENSGACG00000009670	pum2	88	90.511	ENSGALG00000016481	PUM2	92	84.498	Gallus_gallus
ENSGACG00000009670	pum2	100	91.357	ENSGAFG00000013691	pum2	90	91.155	Gambusia_affinis
ENSGACG00000009670	pum2	100	74.030	ENSGAGG00000020698	PUM2	100	73.013	Gopherus_agassizii
ENSGACG00000009670	pum2	100	74.770	ENSGGOG00000011374	PUM2	100	72.936	Gorilla_gorilla
ENSGACG00000009670	pum2	95	94.515	ENSHBUG00000016453	pum2	90	85.458	Haplochromis_burtoni
ENSGACG00000009670	pum2	100	74.309	ENSHGLG00000007892	PUM2	100	73.407	Heterocephalus_glaber_female
ENSGACG00000009670	pum2	100	74.333	ENSHGLG00100015510	PUM2	100	73.524	Heterocephalus_glaber_male
ENSGACG00000009670	pum2	100	90.317	ENSHCOG00000010119	pum2	90	90.689	Hippocampus_comes
ENSGACG00000009670	pum2	100	75.323	ENSSTOG00000006262	PUM2	100	74.006	Ictidomys_tridecemlineatus
ENSGACG00000009670	pum2	100	75.069	ENSJJAG00000020969	Pum2	100	73.278	Jaculus_jaculus
ENSGACG00000009670	pum2	100	91.240	ENSKMAG00000017216	pum2	90	91.333	Kryptolebias_marmoratus
ENSGACG00000009670	pum2	100	92.817	ENSLBEG00000020488	pum2	90	93.097	Labrus_bergylta
ENSGACG00000009670	pum2	100	75.069	ENSLACG00000008723	PUM2	89	74.539	Latimeria_chalumnae
ENSGACG00000009670	pum2	100	74.909	ENSLOCG00000017196	pum2	89	77.008	Lepisosteus_oculatus
ENSGACG00000009670	pum2	100	73.897	ENSLAFG00000009278	PUM2	100	71.703	Loxodonta_africana
ENSGACG00000009670	pum2	100	74.770	ENSMFAG00000000492	PUM2	100	73.028	Macaca_fascicularis
ENSGACG00000009670	pum2	100	74.770	ENSMMUG00000023181	PUM2	100	73.028	Macaca_mulatta
ENSGACG00000009670	pum2	100	74.770	ENSMNEG00000039659	PUM2	100	73.028	Macaca_nemestrina
ENSGACG00000009670	pum2	100	74.862	ENSMLEG00000039243	PUM2	100	73.028	Mandrillus_leucophaeus
ENSGACG00000009670	pum2	100	90.858	ENSMAMG00000006121	pum2	90	91.511	Mastacembelus_armatus
ENSGACG00000009670	pum2	100	90.335	ENSMZEG00005000791	pum2	89	91.163	Maylandia_zebra
ENSGACG00000009670	pum2	100	73.757	ENSMGAG00000014040	PUM2	100	73.080	Meleagris_gallopavo
ENSGACG00000009670	pum2	100	74.862	ENSMAUG00000000311	Pum2	100	72.936	Mesocricetus_auratus
ENSGACG00000009670	pum2	100	74.770	ENSMICG00000011647	PUM2	100	72.752	Microcebus_murinus
ENSGACG00000009670	pum2	100	74.494	ENSMOCG00000013663	Pum2	100	72.978	Microtus_ochrogaster
ENSGACG00000009670	pum2	100	89.556	ENSMMOG00000002975	pum2	100	89.732	Mola_mola
ENSGACG00000009670	pum2	100	70.653	ENSMODG00000009811	PUM2	100	71.415	Monodelphis_domestica
ENSGACG00000009670	pum2	100	74.609	MGP_CAROLIEiJ_G0017603	Pum2	100	76.316	Mus_caroli
ENSGACG00000009670	pum2	100	74.517	ENSMUSG00000020594	Pum2	99	75.940	Mus_musculus
ENSGACG00000009670	pum2	100	75.046	MGP_PahariEiJ_G0029361	Pum2	100	76.316	Mus_pahari
ENSGACG00000009670	pum2	100	74.609	MGP_SPRETEiJ_G0018447	Pum2	100	75.940	Mus_spretus
ENSGACG00000009670	pum2	100	74.057	ENSMPUG00000013734	PUM2	100	73.173	Mustela_putorius_furo
ENSGACG00000009670	pum2	100	73.989	ENSMLUG00000007362	PUM2	100	72.084	Myotis_lucifugus
ENSGACG00000009670	pum2	100	74.770	ENSNGAG00000016665	-	100	73.137	Nannospalax_galili
ENSGACG00000009670	pum2	99	52.202	ENSNGAG00000016239	-	62	57.822	Nannospalax_galili
ENSGACG00000009670	pum2	100	74.770	ENSNLEG00000002509	PUM2	100	72.936	Nomascus_leucogenys
ENSGACG00000009670	pum2	93	70.451	ENSMEUG00000016567	PUM2	100	65.806	Notamacropus_eugenii
ENSGACG00000009670	pum2	71	81.250	ENSOPRG00000001963	PUM2	93	60.329	Ochotona_princeps
ENSGACG00000009670	pum2	100	74.862	ENSODEG00000007823	PUM2	100	73.913	Octodon_degus
ENSGACG00000009670	pum2	100	90.613	ENSONIG00000006119	pum2	90	91.442	Oreochromis_niloticus
ENSGACG00000009670	pum2	100	74.678	ENSOCUG00000017908	PUM2	100	73.223	Oryctolagus_cuniculus
ENSGACG00000009670	pum2	91	97.561	ENSORLG00000012611	pum2	90	89.459	Oryzias_latipes
ENSGACG00000009670	pum2	91	97.561	ENSORLG00020014452	pum2	90	89.459	Oryzias_latipes_hni
ENSGACG00000009670	pum2	100	88.153	ENSORLG00015009427	pum2	90	89.366	Oryzias_latipes_hsok
ENSGACG00000009670	pum2	100	73.921	ENSOARG00000017236	PUM2	100	73.038	Ovis_aries
ENSGACG00000009670	pum2	100	74.770	ENSPPAG00000023095	PUM2	100	72.936	Pan_paniscus
ENSGACG00000009670	pum2	100	73.873	ENSPPRG00000021443	PUM2	100	73.073	Panthera_pardus
ENSGACG00000009670	pum2	100	73.873	ENSPTIG00000018982	PUM2	100	72.988	Panthera_tigris_altaica
ENSGACG00000009670	pum2	100	74.770	ENSPTRG00000011692	PUM2	100	72.936	Pan_troglodytes
ENSGACG00000009670	pum2	100	64.221	ENSPANG00000009393	PUM2	100	85.915	Papio_anubis
ENSGACG00000009670	pum2	93	74.048	ENSPKIG00000023195	pum2	99	82.892	Paramormyrops_kingsleyae
ENSGACG00000009670	pum2	100	74.054	ENSPSIG00000011626	PUM2	88	73.198	Pelodiscus_sinensis
ENSGACG00000009670	pum2	100	74.217	ENSPEMG00000008357	Pum2	100	72.928	Peromyscus_maniculatus_bairdii
ENSGACG00000009670	pum2	100	61.517	ENSPMAG00000007038	pum2	99	60.493	Petromyzon_marinus
ENSGACG00000009670	pum2	100	89.545	ENSPFOG00000019208	pum2	90	89.344	Poecilia_formosa
ENSGACG00000009670	pum2	100	91.543	ENSPLAG00000001826	pum2	90	91.341	Poecilia_latipinna
ENSGACG00000009670	pum2	100	91.543	ENSPMEG00000015766	pum2	90	91.341	Poecilia_mexicana
ENSGACG00000009670	pum2	100	74.954	ENSPPYG00000012617	PUM2	100	72.936	Pongo_abelii
ENSGACG00000009670	pum2	71	88.636	ENSPCAG00000008001	PUM2	70	88.636	Procavia_capensis
ENSGACG00000009670	pum2	99	74.813	ENSPCOG00000019636	PUM2	100	72.770	Propithecus_coquereli
ENSGACG00000009670	pum2	98	68.972	ENSPVAG00000002920	PUM2	100	68.045	Pteropus_vampyrus
ENSGACG00000009670	pum2	100	90.520	ENSPNYG00000022901	pum2	89	91.349	Pundamilia_nyererei
ENSGACG00000009670	pum2	98	87.053	ENSPNAG00000008025	pum2	100	76.510	Pygocentrus_nattereri
ENSGACG00000009670	pum2	100	73.481	ENSRNOG00000006180	Pum2	100	72.946	Rattus_norvegicus
ENSGACG00000009670	pum2	100	74.954	ENSRBIG00000044880	PUM2	100	73.211	Rhinopithecus_bieti
ENSGACG00000009670	pum2	100	75.046	ENSSBOG00000022007	PUM2	100	73.684	Saimiri_boliviensis_boliviensis
ENSGACG00000009670	pum2	88	75.205	ENSSFOG00015003476	pum2	86	76.078	Scleropages_formosus
ENSGACG00000009670	pum2	100	91.643	ENSSMAG00000018236	pum2	90	91.814	Scophthalmus_maximus
ENSGACG00000009670	pum2	95	86.583	ENSSDUG00000001800	pum2	87	91.327	Seriola_dumerili
ENSGACG00000009670	pum2	100	92.565	ENSSLDG00000000981	pum2	90	92.458	Seriola_lalandi_dorsalis
ENSGACG00000009670	pum2	96	65.363	ENSSARG00000010992	PUM2	86	63.483	Sorex_araneus
ENSGACG00000009670	pum2	99	73.576	ENSSPUG00000017012	PUM2	99	72.829	Sphenodon_punctatus
ENSGACG00000009670	pum2	100	91.721	ENSSPAG00000022948	pum2	90	92.272	Stegastes_partitus
ENSGACG00000009670	pum2	100	73.941	ENSSSCG00000008600	PUM2	100	76.923	Sus_scrofa
ENSGACG00000009670	pum2	100	73.961	ENSTGUG00000013149	PUM2	100	73.290	Taeniopygia_guttata
ENSGACG00000009670	pum2	100	85.940	ENSTRUG00000018167	pum2	90	85.833	Takifugu_rubripes
ENSGACG00000009670	pum2	100	88.651	ENSTNIG00000003116	pum2	90	89.023	Tetraodon_nigroviridis
ENSGACG00000009670	pum2	77	88.683	ENSTBEG00000008729	PUM2	76	86.598	Tupaia_belangeri
ENSGACG00000009670	pum2	100	73.781	ENSTTRG00000004887	PUM2	100	72.988	Tursiops_truncatus
ENSGACG00000009670	pum2	72	77.905	ENSUAMG00000008120	PUM2	98	76.705	Ursus_americanus
ENSGACG00000009670	pum2	100	74.057	ENSUMAG00000023198	PUM2	100	73.173	Ursus_maritimus
ENSGACG00000009670	pum2	100	73.897	ENSVPAG00000005056	PUM2	100	72.452	Vicugna_pacos
ENSGACG00000009670	pum2	100	74.057	ENSVVUG00000014829	PUM2	100	73.173	Vulpes_vulpes
ENSGACG00000009670	pum2	100	71.271	ENSXETG00000008903	pum2	90	69.705	Xenopus_tropicalis
ENSGACG00000009670	pum2	95	86.197	ENSXCOG00000002556	pum2	87	90.900	Xiphophorus_couchianus
ENSGACG00000009670	pum2	100	91.729	ENSXMAG00000017682	pum2	90	91.527	Xiphophorus_maculatus