EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000009783 (Gene tree)
Gene ID: -
Gene Symbol: edc3
Alias: im:7151288|lsm16|wu:fb82d07|yjdc|zgc:112006
Full Name: enhancer of mRNA decapping 3 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 2178 bases
Position: chrgroupXIX:11152973-11155150
Accession: ZDB-GENE-050522-287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000012919	FDF	PF09532.10	2.9e-11	1	1
ENSGACP00000012919	LSM14	PF12701.7	9.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000012943	-	1437	-	ENSGACP00000012919	478 (aa)	-	G3P5P6

Gene Model

Click here to download ENSGACG00000009783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000009783's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000009783	edc3	99	61.176	ENSGACG00000014671	EDC3	99	60.980

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000009783	edc3	100	68.762	ENSG00000179151	EDC3	100	78.659	Homo_sapiens
ENSGACG00000009783	edc3	100	91.423	ENSAPOG00000010791	edc3	100	91.423	Acanthochromis_polyacanthus
ENSGACG00000009783	edc3	100	59.438	ENSAPOG00000008655	EDC3	100	59.438	Acanthochromis_polyacanthus
ENSGACG00000009783	edc3	100	68.173	ENSAMEG00000008963	EDC3	100	68.173	Ailuropoda_melanoleuca
ENSGACG00000009783	edc3	99	64.056	ENSACIG00000005330	EDC3	99	64.458	Amphilophus_citrinellus
ENSGACG00000009783	edc3	100	90.795	ENSACIG00000017751	edc3	100	90.795	Amphilophus_citrinellus
ENSGACG00000009783	edc3	100	64.389	ENSAOCG00000009103	-	100	64.389	Amphiprion_ocellaris
ENSGACG00000009783	edc3	100	91.632	ENSAOCG00000005431	edc3	100	91.632	Amphiprion_ocellaris
ENSGACG00000009783	edc3	100	91.632	ENSAPEG00000000968	edc3	100	91.632	Amphiprion_percula
ENSGACG00000009783	edc3	100	64.256	ENSAPEG00000007841	EDC3	100	64.256	Amphiprion_percula
ENSGACG00000009783	edc3	100	66.529	ENSATEG00000004205	-	100	66.529	Anabas_testudineus
ENSGACG00000009783	edc3	100	91.632	ENSATEG00000015505	edc3	100	91.632	Anabas_testudineus
ENSGACG00000009783	edc3	89	67.841	ENSAPLG00000008957	EDC3	100	67.841	Anas_platyrhynchos
ENSGACG00000009783	edc3	77	67.424	ENSACAG00000000460	-	100	67.424	Anolis_carolinensis
ENSGACG00000009783	edc3	100	68.959	ENSANAG00000024078	EDC3	100	68.959	Aotus_nancymaae
ENSGACG00000009783	edc3	99	64.865	ENSACLG00000018776	-	100	64.730	Astatotilapia_calliptera
ENSGACG00000009783	edc3	100	90.167	ENSACLG00000007232	edc3	100	90.167	Astatotilapia_calliptera
ENSGACG00000009783	edc3	100	77.976	ENSAMXG00000001589	edc3	100	77.976	Astyanax_mexicanus
ENSGACG00000009783	edc3	100	68.369	ENSBTAG00000007308	EDC3	100	68.369	Bos_taurus
ENSGACG00000009783	edc3	100	68.762	ENSCJAG00000017681	EDC3	100	68.762	Callithrix_jacchus
ENSGACG00000009783	edc3	100	68.173	ENSCAFG00000017935	EDC3	100	68.173	Canis_familiaris
ENSGACG00000009783	edc3	100	68.173	ENSCAFG00020003909	EDC3	100	68.173	Canis_lupus_dingo
ENSGACG00000009783	edc3	100	68.369	ENSCHIG00000023658	EDC3	100	68.369	Capra_hircus
ENSGACG00000009783	edc3	100	69.155	ENSTSYG00000004822	EDC3	100	69.155	Carlito_syrichta
ENSGACG00000009783	edc3	100	68.959	ENSCPOG00000015595	EDC3	100	68.959	Cavia_porcellus
ENSGACG00000009783	edc3	100	68.762	ENSCCAG00000021663	EDC3	100	68.762	Cebus_capucinus
ENSGACG00000009783	edc3	100	68.762	ENSCATG00000037511	EDC3	100	68.762	Cercocebus_atys
ENSGACG00000009783	edc3	100	68.566	ENSCLAG00000005700	EDC3	100	68.566	Chinchilla_lanigera
ENSGACG00000009783	edc3	100	68.762	ENSCSAG00000014239	EDC3	100	68.762	Chlorocebus_sabaeus
ENSGACG00000009783	edc3	100	68.959	ENSCPBG00000024239	EDC3	100	68.959	Chrysemys_picta_bellii
ENSGACG00000009783	edc3	99	37.255	ENSCING00000022142	-	99	37.255	Ciona_intestinalis
ENSGACG00000009783	edc3	100	68.762	ENSCANG00000028699	EDC3	100	68.762	Colobus_angolensis_palliatus
ENSGACG00000009783	edc3	100	68.566	ENSCGRG00001013874	Edc3	100	68.566	Cricetulus_griseus_chok1gshd
ENSGACG00000009783	edc3	100	68.566	ENSCGRG00000011885	Edc3	100	68.566	Cricetulus_griseus_crigri
ENSGACG00000009783	edc3	99	88.679	ENSCSEG00000012996	edc3	99	88.679	Cynoglossus_semilaevis
ENSGACG00000009783	edc3	100	88.285	ENSCVAG00000008023	edc3	100	88.285	Cyprinodon_variegatus
ENSGACG00000009783	edc3	99	75.050	ENSDARG00000051931	edc3	99	75.446	Danio_rerio
ENSGACG00000009783	edc3	100	60.271	ENSDNOG00000030661	EDC3	100	60.271	Dasypus_novemcinctus
ENSGACG00000009783	edc3	68	77.778	ENSETEG00000002398	-	64	77.778	Echinops_telfairi
ENSGACG00000009783	edc3	100	68.369	ENSEASG00005005071	EDC3	100	68.369	Equus_asinus_asinus
ENSGACG00000009783	edc3	100	68.369	ENSECAG00000017994	EDC3	100	68.369	Equus_caballus
ENSGACG00000009783	edc3	100	70.833	ENSELUG00000007607	EDC3	100	70.833	Esox_lucius
ENSGACG00000009783	edc3	100	80.992	ENSELUG00000005794	edc3	100	80.992	Esox_lucius
ENSGACG00000009783	edc3	100	68.369	ENSFCAG00000002014	EDC3	100	68.369	Felis_catus
ENSGACG00000009783	edc3	98	68.072	ENSFALG00000004543	EDC3	96	68.072	Ficedula_albicollis
ENSGACG00000009783	edc3	100	68.566	ENSFDAG00000012582	EDC3	100	68.566	Fukomys_damarensis
ENSGACG00000009783	edc3	100	89.540	ENSFHEG00000009375	edc3	100	89.540	Fundulus_heteroclitus
ENSGACG00000009783	edc3	100	85.239	ENSGMOG00000002715	edc3	100	85.239	Gadus_morhua
ENSGACG00000009783	edc3	100	68.836	ENSGALG00000040181	EDC3	100	68.836	Gallus_gallus
ENSGACG00000009783	edc3	100	88.075	ENSGAFG00000014433	edc3	100	88.075	Gambusia_affinis
ENSGACG00000009783	edc3	100	69.231	ENSGAGG00000023477	EDC3	100	69.231	Gopherus_agassizii
ENSGACG00000009783	edc3	100	68.762	ENSGGOG00000003552	EDC3	100	68.762	Gorilla_gorilla
ENSGACG00000009783	edc3	99	64.865	ENSHBUG00000020817	EDC3	99	64.865	Haplochromis_burtoni
ENSGACG00000009783	edc3	100	90.167	ENSHBUG00000003635	edc3	100	90.167	Haplochromis_burtoni
ENSGACG00000009783	edc3	100	85.625	ENSHCOG00000016834	edc3	100	85.625	Hippocampus_comes
ENSGACG00000009783	edc3	99	78.514	ENSIPUG00000005695	edc3	100	78.514	Ictalurus_punctatus
ENSGACG00000009783	edc3	100	68.762	ENSSTOG00000013936	EDC3	100	68.762	Ictidomys_tridecemlineatus
ENSGACG00000009783	edc3	100	68.566	ENSJJAG00000008074	Edc3	100	68.566	Jaculus_jaculus
ENSGACG00000009783	edc3	100	63.693	ENSKMAG00000001987	EDC3	100	63.693	Kryptolebias_marmoratus
ENSGACG00000009783	edc3	100	88.100	ENSKMAG00000001243	edc3	100	88.518	Kryptolebias_marmoratus
ENSGACG00000009783	edc3	100	64.213	ENSLBEG00000017984	EDC3	100	64.213	Labrus_bergylta
ENSGACG00000009783	edc3	100	90.795	ENSLBEG00000013435	edc3	99	90.795	Labrus_bergylta
ENSGACG00000009783	edc3	100	70.039	ENSLACG00000014149	EDC3	100	70.039	Latimeria_chalumnae
ENSGACG00000009783	edc3	99	72.121	ENSLOCG00000014625	edc3	99	72.121	Lepisosteus_oculatus
ENSGACG00000009783	edc3	100	68.504	ENSLAFG00000002992	EDC3	100	68.504	Loxodonta_africana
ENSGACG00000009783	edc3	100	68.959	ENSMFAG00000043074	EDC3	100	68.959	Macaca_fascicularis
ENSGACG00000009783	edc3	100	68.959	ENSMMUG00000011071	EDC3	100	68.959	Macaca_mulatta
ENSGACG00000009783	edc3	100	68.959	ENSMNEG00000035316	EDC3	100	68.959	Macaca_nemestrina
ENSGACG00000009783	edc3	100	68.762	ENSMLEG00000030372	EDC3	100	68.762	Mandrillus_leucophaeus
ENSGACG00000009783	edc3	100	89.958	ENSMAMG00000000505	edc3	100	89.958	Mastacembelus_armatus
ENSGACG00000009783	edc3	99	63.941	ENSMAMG00000005423	-	99	63.941	Mastacembelus_armatus
ENSGACG00000009783	edc3	99	64.213	ENSMZEG00005005654	EDC3	100	64.082	Maylandia_zebra
ENSGACG00000009783	edc3	100	90.167	ENSMZEG00005004892	edc3	100	90.167	Maylandia_zebra
ENSGACG00000009783	edc3	100	68.836	ENSMGAG00000002617	EDC3	100	68.836	Meleagris_gallopavo
ENSGACG00000009783	edc3	100	68.369	ENSMICG00000043190	EDC3	100	68.369	Microcebus_murinus
ENSGACG00000009783	edc3	100	67.780	ENSMOCG00000016205	Edc3	100	67.780	Microtus_ochrogaster
ENSGACG00000009783	edc3	99	90.985	ENSMMOG00000012278	edc3	99	90.985	Mola_mola
ENSGACG00000009783	edc3	100	68.566	ENSMODG00000009442	EDC3	100	68.566	Monodelphis_domestica
ENSGACG00000009783	edc3	100	91.632	ENSMALG00000008658	edc3	100	91.632	Monopterus_albus
ENSGACG00000009783	edc3	100	68.173	MGP_CAROLIEiJ_G0032280	Edc3	100	76.923	Mus_caroli
ENSGACG00000009783	edc3	100	68.173	ENSMUSG00000038957	Edc3	100	76.923	Mus_musculus
ENSGACG00000009783	edc3	100	68.173	MGP_PahariEiJ_G0015146	Edc3	100	76.923	Mus_pahari
ENSGACG00000009783	edc3	100	68.173	MGP_SPRETEiJ_G0033420	Edc3	100	76.923	Mus_spretus
ENSGACG00000009783	edc3	100	68.369	ENSMPUG00000017293	EDC3	100	68.369	Mustela_putorius_furo
ENSGACG00000009783	edc3	100	68.689	ENSMLUG00000016382	EDC3	100	68.689	Myotis_lucifugus
ENSGACG00000009783	edc3	100	68.369	ENSNGAG00000010923	Edc3	100	68.369	Nannospalax_galili
ENSGACG00000009783	edc3	100	89.958	ENSNBRG00000002434	edc3	100	89.958	Neolamprologus_brichardi
ENSGACG00000009783	edc3	99	64.938	ENSNBRG00000007881	EDC3	99	64.938	Neolamprologus_brichardi
ENSGACG00000009783	edc3	100	59.528	ENSNLEG00000014577	EDC3	100	59.528	Nomascus_leucogenys
ENSGACG00000009783	edc3	100	68.836	ENSMEUG00000009077	EDC3	100	68.639	Notamacropus_eugenii
ENSGACG00000009783	edc3	84	77.778	ENSOPRG00000009540	-	79	77.778	Ochotona_princeps
ENSGACG00000009783	edc3	100	90.377	ENSONIG00000008434	edc3	100	90.377	Oreochromis_niloticus
ENSGACG00000009783	edc3	100	60.659	ENSONIG00000002932	-	100	60.659	Oreochromis_niloticus
ENSGACG00000009783	edc3	77	66.247	ENSOCUG00000017740	EDC3	86	66.247	Oryctolagus_cuniculus
ENSGACG00000009783	edc3	100	63.636	ENSORLG00000014399	-	98	63.636	Oryzias_latipes
ENSGACG00000009783	edc3	100	86.013	ENSORLG00000004883	edc3	100	86.013	Oryzias_latipes
ENSGACG00000009783	edc3	100	86.430	ENSORLG00020012262	edc3	100	86.430	Oryzias_latipes_hni
ENSGACG00000009783	edc3	100	63.636	ENSORLG00020019446	-	100	63.636	Oryzias_latipes_hni
ENSGACG00000009783	edc3	100	86.221	ENSORLG00015005634	edc3	100	86.221	Oryzias_latipes_hsok
ENSGACG00000009783	edc3	100	63.636	ENSORLG00015017635	-	96	63.636	Oryzias_latipes_hsok
ENSGACG00000009783	edc3	100	86.820	ENSOMEG00000014026	edc3	100	86.820	Oryzias_melastigma
ENSGACG00000009783	edc3	100	64.803	ENSOMEG00000017354	EDC3	100	64.803	Oryzias_melastigma
ENSGACG00000009783	edc3	100	68.173	ENSOGAG00000014441	EDC3	100	68.566	Otolemur_garnettii
ENSGACG00000009783	edc3	100	67.647	ENSOARG00000003476	EDC3	100	68.039	Ovis_aries
ENSGACG00000009783	edc3	100	68.762	ENSPPAG00000040143	EDC3	100	68.762	Pan_paniscus
ENSGACG00000009783	edc3	100	68.369	ENSPPRG00000006257	EDC3	100	68.369	Panthera_pardus
ENSGACG00000009783	edc3	100	68.369	ENSPTIG00000017424	EDC3	100	68.369	Panthera_tigris_altaica
ENSGACG00000009783	edc3	100	68.762	ENSPTRG00000007279	EDC3	100	68.762	Pan_troglodytes
ENSGACG00000009783	edc3	100	68.762	ENSPANG00000015997	EDC3	100	68.762	Papio_anubis
ENSGACG00000009783	edc3	100	76.008	ENSPKIG00000019810	EDC3	100	76.008	Paramormyrops_kingsleyae
ENSGACG00000009783	edc3	100	72.530	ENSPKIG00000004416	edc3	100	72.530	Paramormyrops_kingsleyae
ENSGACG00000009783	edc3	100	65.029	ENSPSIG00000008474	EDC3	100	65.226	Pelodiscus_sinensis
ENSGACG00000009783	edc3	100	87.500	ENSPMGG00000007223	edc3	100	87.500	Periophthalmus_magnuspinnatus
ENSGACG00000009783	edc3	100	68.173	ENSPEMG00000015260	Edc3	100	68.173	Peromyscus_maniculatus_bairdii
ENSGACG00000009783	edc3	100	68.639	ENSPCIG00000006276	EDC3	70	68.775	Phascolarctos_cinereus
ENSGACG00000009783	edc3	100	88.912	ENSPFOG00000012204	edc3	100	88.912	Poecilia_formosa
ENSGACG00000009783	edc3	100	88.912	ENSPLAG00000014420	edc3	100	88.912	Poecilia_latipinna
ENSGACG00000009783	edc3	100	88.912	ENSPMEG00000023289	edc3	100	88.912	Poecilia_mexicana
ENSGACG00000009783	edc3	100	88.703	ENSPREG00000016022	edc3	100	88.703	Poecilia_reticulata
ENSGACG00000009783	edc3	100	67.976	ENSPPYG00000006642	EDC3	100	67.976	Pongo_abelii
ENSGACG00000009783	edc3	92	77.778	ENSPCAG00000002802	EDC3	87	77.778	Procavia_capensis
ENSGACG00000009783	edc3	100	68.762	ENSPCOG00000013364	EDC3	100	68.762	Propithecus_coquereli
ENSGACG00000009783	edc3	100	68.566	ENSPVAG00000014733	EDC3	100	68.566	Pteropus_vampyrus
ENSGACG00000009783	edc3	100	90.167	ENSPNYG00000021797	edc3	100	90.167	Pundamilia_nyererei
ENSGACG00000009783	edc3	99	64.865	ENSPNYG00000009669	EDC3	99	64.865	Pundamilia_nyererei
ENSGACG00000009783	edc3	100	78.373	ENSPNAG00000019657	edc3	100	78.373	Pygocentrus_nattereri
ENSGACG00000009783	edc3	99	68.182	ENSRNOG00000019579	Edc3	99	68.577	Rattus_norvegicus
ENSGACG00000009783	edc3	100	68.762	ENSRBIG00000019488	EDC3	100	68.762	Rhinopithecus_bieti
ENSGACG00000009783	edc3	100	68.762	ENSRROG00000034959	EDC3	100	68.762	Rhinopithecus_roxellana
ENSGACG00000009783	edc3	100	68.762	ENSSBOG00000004896	EDC3	100	68.762	Saimiri_boliviensis_boliviensis
ENSGACG00000009783	edc3	96	68.238	ENSSHAG00000015075	EDC3	95	68.238	Sarcophilus_harrisii
ENSGACG00000009783	edc3	100	77.734	ENSSFOG00015016939	edc3	100	77.734	Scleropages_formosus
ENSGACG00000009783	edc3	100	71.843	ENSSFOG00015002439	edc3	100	71.843	Scleropages_formosus
ENSGACG00000009783	edc3	99	65.145	ENSSMAG00000010176	-	99	65.145	Scophthalmus_maximus
ENSGACG00000009783	edc3	100	91.213	ENSSMAG00000010695	edc3	100	91.213	Scophthalmus_maximus
ENSGACG00000009783	edc3	100	92.887	ENSSDUG00000021844	edc3	100	92.887	Seriola_dumerili
ENSGACG00000009783	edc3	100	68.182	ENSSDUG00000007671	EDC3	100	68.182	Seriola_dumerili
ENSGACG00000009783	edc3	100	92.678	ENSSLDG00000022046	edc3	100	92.678	Seriola_lalandi_dorsalis
ENSGACG00000009783	edc3	79	79.435	ENSSARG00000003907	EDC3	80	79.435	Sorex_araneus
ENSGACG00000009783	edc3	100	67.387	ENSSPUG00000008232	EDC3	100	67.387	Sphenodon_punctatus
ENSGACG00000009783	edc3	100	65.631	ENSSPAG00000020327	EDC3	100	65.839	Stegastes_partitus
ENSGACG00000009783	edc3	100	92.678	ENSSPAG00000010009	edc3	100	92.678	Stegastes_partitus
ENSGACG00000009783	edc3	100	71.816	ENSSSCG00000001903	EDC3	100	71.816	Sus_scrofa
ENSGACG00000009783	edc3	100	68.836	ENSTGUG00000004007	EDC3	100	68.836	Taeniopygia_guttata
ENSGACG00000009783	edc3	100	88.309	ENSTRUG00000017078	edc3	100	88.309	Takifugu_rubripes
ENSGACG00000009783	edc3	100	87.500	ENSTNIG00000016047	edc3	100	87.500	Tetraodon_nigroviridis
ENSGACG00000009783	edc3	100	69.291	ENSTTRG00000007990	EDC3	100	69.291	Tursiops_truncatus
ENSGACG00000009783	edc3	100	68.173	ENSUAMG00000026710	-	100	68.173	Ursus_americanus
ENSGACG00000009783	edc3	100	68.173	ENSUMAG00000005006	EDC3	96	68.173	Ursus_maritimus
ENSGACG00000009783	edc3	84	70.370	ENSVPAG00000003499	-	79	70.370	Vicugna_pacos
ENSGACG00000009783	edc3	100	68.173	ENSVVUG00000018601	EDC3	100	68.173	Vulpes_vulpes
ENSGACG00000009783	edc3	72	74.499	ENSXETG00000010622	edc3	99	75.931	Xenopus_tropicalis
ENSGACG00000009783	edc3	100	88.285	ENSXMAG00000007377	edc3	100	88.285	Xiphophorus_maculatus