EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000009864 (Gene tree)
Gene ID: -
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor%2C mitochondrial 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 9643 bases
Position: chrgroupI:9818367-9828009
Accession: ZDB-GENE-061013-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000013040	GTP_EFTU	PF00009.27	8.4e-63	1	1
ENSGACP00000013037	GTP_EFTU	PF00009.27	8.8e-63	1	1
ENSGACP00000013040	GTP_EFTU_D2	PF03144.25	4.7e-17	1	1
ENSGACP00000013037	GTP_EFTU_D2	PF03144.25	5e-17	1	1
ENSGACP00000013040	EFG_IV	PF03764.18	5.9e-38	1	1
ENSGACP00000013037	EFG_IV	PF03764.18	6.4e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000013062	-	2578	-	ENSGACP00000013037	772 (aa)	-	G3P614
ENSGACT00000013065	-	2627	-	ENSGACP00000013040	749 (aa)	-	G3P617

Gene Model

Click here to download ENSGACG00000009864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000009864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000009864	gfm1	73	38.926	ENSGACG00000012793	-	72	38.926
ENSGACG00000009864	gfm1	92	33.380	ENSGACG00000015889	gfm2	97	34.072
ENSGACG00000009864	gfm1	75	39.333	ENSGACG00000015308	eef2b	74	39.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000009864	gfm1	97	79.172	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSGACG00000009864	gfm1	93	87.983	ENSAPOG00000016489	gfm1	99	87.983	Acanthochromis_polyacanthus
ENSGACG00000009864	gfm1	98	79.212	ENSAMEG00000013542	GFM1	99	78.353	Ailuropoda_melanoleuca
ENSGACG00000009864	gfm1	97	84.986	ENSACIG00000014465	gfm1	94	84.986	Amphilophus_citrinellus
ENSGACG00000009864	gfm1	100	88.785	ENSAOCG00000006023	gfm1	100	88.785	Amphiprion_ocellaris
ENSGACG00000009864	gfm1	100	88.518	ENSAPEG00000024499	gfm1	100	88.518	Amphiprion_percula
ENSGACG00000009864	gfm1	99	89.973	ENSATEG00000013789	gfm1	99	89.973	Anabas_testudineus
ENSGACG00000009864	gfm1	97	78.237	ENSAPLG00000005022	GFM1	100	78.237	Anas_platyrhynchos
ENSGACG00000009864	gfm1	97	79.201	ENSACAG00000006829	GFM1	98	79.201	Anolis_carolinensis
ENSGACG00000009864	gfm1	99	77.188	ENSANAG00000035983	GFM1	99	77.188	Aotus_nancymaae
ENSGACG00000009864	gfm1	100	89.720	ENSACLG00000016586	gfm1	100	89.720	Astatotilapia_calliptera
ENSGACG00000009864	gfm1	99	84.358	ENSAMXG00000013435	gfm1	98	85.266	Astyanax_mexicanus
ENSGACG00000009864	gfm1	97	79.310	ENSBTAG00000027795	GFM1	99	77.586	Bos_taurus
ENSGACG00000009864	gfm1	97	54.011	WBGene00009246	gfm-1	95	56.522	Caenorhabditis_elegans
ENSGACG00000009864	gfm1	99	77.394	ENSCJAG00000000363	GFM1	99	77.394	Callithrix_jacchus
ENSGACG00000009864	gfm1	96	80.474	ENSCAFG00000009006	GFM1	99	80.296	Canis_familiaris
ENSGACG00000009864	gfm1	99	77.912	ENSCAFG00020005878	GFM1	98	80.474	Canis_lupus_dingo
ENSGACG00000009864	gfm1	97	79.586	ENSCHIG00000015220	GFM1	99	77.955	Capra_hircus
ENSGACG00000009864	gfm1	99	77.660	ENSTSYG00000002013	GFM1	99	77.660	Carlito_syrichta
ENSGACG00000009864	gfm1	97	69.136	ENSCAPG00000005699	GFM1	97	69.571	Cavia_aperea
ENSGACG00000009864	gfm1	99	77.689	ENSCPOG00000001194	GFM1	99	77.689	Cavia_porcellus
ENSGACG00000009864	gfm1	99	77.321	ENSCCAG00000025561	GFM1	99	77.321	Cebus_capucinus
ENSGACG00000009864	gfm1	99	77.454	ENSCATG00000037622	GFM1	99	77.454	Cercocebus_atys
ENSGACG00000009864	gfm1	99	78.349	ENSCLAG00000002503	GFM1	99	77.510	Chinchilla_lanigera
ENSGACG00000009864	gfm1	99	77.586	ENSCSAG00000012162	GFM1	99	77.586	Chlorocebus_sabaeus
ENSGACG00000009864	gfm1	99	69.221	ENSCHOG00000004867	GFM1	99	69.221	Choloepus_hoffmanni
ENSGACG00000009864	gfm1	100	79.067	ENSCPBG00000018367	GFM1	99	79.067	Chrysemys_picta_bellii
ENSGACG00000009864	gfm1	98	56.274	ENSCING00000011960	-	93	59.135	Ciona_intestinalis
ENSGACG00000009864	gfm1	95	59.861	ENSCSAVG00000008514	-	99	59.861	Ciona_savignyi
ENSGACG00000009864	gfm1	97	79.310	ENSCANG00000031714	GFM1	99	77.454	Colobus_angolensis_palliatus
ENSGACG00000009864	gfm1	99	77.793	ENSCGRG00001022095	GFM1	99	77.793	Cricetulus_griseus_chok1gshd
ENSGACG00000009864	gfm1	99	77.793	ENSCGRG00000012043	GFM1	99	77.793	Cricetulus_griseus_crigri
ENSGACG00000009864	gfm1	97	82.988	ENSCSEG00000017088	gfm1	99	82.988	Cynoglossus_semilaevis
ENSGACG00000009864	gfm1	100	90.921	ENSCVAG00000004126	gfm1	100	90.921	Cyprinodon_variegatus
ENSGACG00000009864	gfm1	99	81.952	ENSDARG00000063624	gfm1	99	81.952	Danio_rerio
ENSGACG00000009864	gfm1	54	77.941	ENSDNOG00000016385	-	99	77.941	Dasypus_novemcinctus
ENSGACG00000009864	gfm1	99	76.596	ENSDORG00000014165	Gfm1	99	76.596	Dipodomys_ordii
ENSGACG00000009864	gfm1	95	68.970	FBgn0263133	mEFG1	95	68.970	Drosophila_melanogaster
ENSGACG00000009864	gfm1	97	71.939	ENSETEG00000019197	GFM1	99	70.331	Echinops_telfairi
ENSGACG00000009864	gfm1	90	63.166	ENSEBUG00000012794	gfm1	100	63.166	Eptatretus_burgeri
ENSGACG00000009864	gfm1	96	58.971	ENSEEUG00000000429	GFM1	99	58.971	Erinaceus_europaeus
ENSGACG00000009864	gfm1	99	85.294	ENSELUG00000014728	gfm1	99	85.294	Esox_lucius
ENSGACG00000009864	gfm1	97	79.586	ENSFCAG00000013291	GFM1	99	77.851	Felis_catus
ENSGACG00000009864	gfm1	90	77.926	ENSFALG00000007619	GFM1	99	77.926	Ficedula_albicollis
ENSGACG00000009864	gfm1	99	77.556	ENSFDAG00000016559	GFM1	99	77.556	Fukomys_damarensis
ENSGACG00000009864	gfm1	100	90.387	ENSFHEG00000006091	gfm1	100	90.387	Fundulus_heteroclitus
ENSGACG00000009864	gfm1	97	86.915	ENSGMOG00000010161	gfm1	99	86.915	Gadus_morhua
ENSGACG00000009864	gfm1	97	77.961	ENSGALG00000009634	GFM1	98	77.961	Gallus_gallus
ENSGACG00000009864	gfm1	99	89.973	ENSGAFG00000012527	gfm1	99	89.973	Gambusia_affinis
ENSGACG00000009864	gfm1	97	79.172	ENSGGOG00000003085	GFM1	99	77.321	Gorilla_gorilla
ENSGACG00000009864	gfm1	100	89.720	ENSHBUG00000002120	gfm1	100	89.720	Haplochromis_burtoni
ENSGACG00000009864	gfm1	97	78.621	ENSHGLG00000016855	GFM1	99	76.760	Heterocephalus_glaber_female
ENSGACG00000009864	gfm1	97	78.621	ENSHGLG00100013049	GFM1	99	76.760	Heterocephalus_glaber_male
ENSGACG00000009864	gfm1	100	87.850	ENSHCOG00000007638	gfm1	99	88.948	Hippocampus_comes
ENSGACG00000009864	gfm1	99	84.091	ENSIPUG00000005873	gfm1	99	84.091	Ictalurus_punctatus
ENSGACG00000009864	gfm1	98	77.371	ENSSTOG00000010150	GFM1	99	77.371	Ictidomys_tridecemlineatus
ENSGACG00000009864	gfm1	99	76.831	ENSJJAG00000016447	Gfm1	99	76.831	Jaculus_jaculus
ENSGACG00000009864	gfm1	99	86.230	ENSKMAG00000020768	gfm1	99	86.230	Kryptolebias_marmoratus
ENSGACG00000009864	gfm1	94	91.311	ENSLBEG00000021315	gfm1	100	91.311	Labrus_bergylta
ENSGACG00000009864	gfm1	99	79.947	ENSLACG00000012295	GFM1	99	79.947	Latimeria_chalumnae
ENSGACG00000009864	gfm1	97	78.659	ENSLOCG00000003778	gfm1	99	78.659	Lepisosteus_oculatus
ENSGACG00000009864	gfm1	99	75.701	ENSLAFG00000010945	GFM1	99	76.243	Loxodonta_africana
ENSGACG00000009864	gfm1	99	77.321	ENSMFAG00000035731	GFM1	99	77.321	Macaca_fascicularis
ENSGACG00000009864	gfm1	99	77.321	ENSMMUG00000004961	GFM1	99	77.321	Macaca_mulatta
ENSGACG00000009864	gfm1	99	77.321	ENSMNEG00000033245	GFM1	99	77.321	Macaca_nemestrina
ENSGACG00000009864	gfm1	97	77.624	ENSMLEG00000030908	GFM1	99	77.267	Mandrillus_leucophaeus
ENSGACG00000009864	gfm1	99	89.840	ENSMAMG00000011760	gfm1	99	89.840	Mastacembelus_armatus
ENSGACG00000009864	gfm1	100	89.853	ENSMZEG00005016639	gfm1	100	89.853	Maylandia_zebra
ENSGACG00000009864	gfm1	97	78.483	ENSMGAG00000010641	GFM1	97	78.483	Meleagris_gallopavo
ENSGACG00000009864	gfm1	99	77.926	ENSMAUG00000000611	Gfm1	99	77.926	Mesocricetus_auratus
ENSGACG00000009864	gfm1	97	79.448	ENSMICG00000049086	GFM1	99	77.822	Microcebus_murinus
ENSGACG00000009864	gfm1	99	78.059	ENSMOCG00000000465	Gfm1	99	78.059	Microtus_ochrogaster
ENSGACG00000009864	gfm1	98	89.905	ENSMMOG00000012538	gfm1	99	89.905	Mola_mola
ENSGACG00000009864	gfm1	99	78.302	ENSMODG00000015673	GFM1	99	78.302	Monodelphis_domestica
ENSGACG00000009864	gfm1	96	88.006	ENSMALG00000012508	gfm1	95	88.006	Monopterus_albus
ENSGACG00000009864	gfm1	99	77.660	MGP_CAROLIEiJ_G0025052	Gfm1	99	77.660	Mus_caroli
ENSGACG00000009864	gfm1	99	77.660	ENSMUSG00000027774	Gfm1	99	77.660	Mus_musculus
ENSGACG00000009864	gfm1	100	77.291	MGP_PahariEiJ_G0026495	Gfm1	100	77.291	Mus_pahari
ENSGACG00000009864	gfm1	99	77.660	MGP_SPRETEiJ_G0025994	Gfm1	99	77.660	Mus_spretus
ENSGACG00000009864	gfm1	99	78.220	ENSMPUG00000002859	GFM1	99	78.220	Mustela_putorius_furo
ENSGACG00000009864	gfm1	99	78.117	ENSMLUG00000000452	GFM1	99	78.117	Myotis_lucifugus
ENSGACG00000009864	gfm1	99	77.719	ENSNGAG00000012375	Gfm1	99	77.719	Nannospalax_galili
ENSGACG00000009864	gfm1	97	89.986	ENSNBRG00000004631	gfm1	99	89.986	Neolamprologus_brichardi
ENSGACG00000009864	gfm1	97	79.172	ENSNLEG00000004176	GFM1	99	77.600	Nomascus_leucogenys
ENSGACG00000009864	gfm1	91	71.366	ENSMEUG00000007784	GFM1	99	71.366	Notamacropus_eugenii
ENSGACG00000009864	gfm1	99	77.540	ENSOPRG00000009860	GFM1	99	77.540	Ochotona_princeps
ENSGACG00000009864	gfm1	97	79.724	ENSODEG00000004316	GFM1	99	77.955	Octodon_degus
ENSGACG00000009864	gfm1	100	90.254	ENSONIG00000003772	gfm1	100	90.254	Oreochromis_niloticus
ENSGACG00000009864	gfm1	97	80.110	ENSOCUG00000013561	GFM1	99	78.486	Oryctolagus_cuniculus
ENSGACG00000009864	gfm1	95	89.548	ENSORLG00000006487	gfm1	99	89.548	Oryzias_latipes
ENSGACG00000009864	gfm1	99	89.037	ENSORLG00020003362	gfm1	99	89.037	Oryzias_latipes_hni
ENSGACG00000009864	gfm1	99	88.904	ENSORLG00015005829	gfm1	99	88.904	Oryzias_latipes_hsok
ENSGACG00000009864	gfm1	100	89.319	ENSOMEG00000012894	gfm1	100	89.319	Oryzias_melastigma
ENSGACG00000009864	gfm1	99	77.056	ENSOGAG00000008298	GFM1	99	77.056	Otolemur_garnettii
ENSGACG00000009864	gfm1	96	79.057	ENSOARG00000002409	GFM1	99	79.057	Ovis_aries
ENSGACG00000009864	gfm1	97	79.172	ENSPPAG00000033881	GFM1	99	77.321	Pan_paniscus
ENSGACG00000009864	gfm1	97	79.586	ENSPPRG00000009281	GFM1	99	77.851	Panthera_pardus
ENSGACG00000009864	gfm1	97	79.448	ENSPTIG00000012416	GFM1	99	77.719	Panthera_tigris_altaica
ENSGACG00000009864	gfm1	97	79.172	ENSPTRG00000015570	GFM1	99	77.321	Pan_troglodytes
ENSGACG00000009864	gfm1	99	77.321	ENSPANG00000016512	GFM1	99	77.321	Papio_anubis
ENSGACG00000009864	gfm1	99	84.091	ENSPKIG00000004876	gfm1	99	84.091	Paramormyrops_kingsleyae
ENSGACG00000009864	gfm1	100	79.200	ENSPSIG00000012567	GFM1	99	79.200	Pelodiscus_sinensis
ENSGACG00000009864	gfm1	97	86.207	ENSPMGG00000014068	gfm1	99	86.207	Periophthalmus_magnuspinnatus
ENSGACG00000009864	gfm1	99	77.793	ENSPEMG00000008942	Gfm1	99	77.793	Peromyscus_maniculatus_bairdii
ENSGACG00000009864	gfm1	86	77.223	ENSPCIG00000020195	GFM1	98	78.662	Phascolarctos_cinereus
ENSGACG00000009864	gfm1	99	90.642	ENSPFOG00000011022	gfm1	99	90.642	Poecilia_formosa
ENSGACG00000009864	gfm1	98	90.217	ENSPLAG00000019585	gfm1	100	90.603	Poecilia_latipinna
ENSGACG00000009864	gfm1	99	90.508	ENSPMEG00000012376	gfm1	99	90.508	Poecilia_mexicana
ENSGACG00000009864	gfm1	99	90.508	ENSPREG00000001332	gfm1	95	90.508	Poecilia_reticulata
ENSGACG00000009864	gfm1	97	79.034	ENSPPYG00000014244	GFM1	99	77.188	Pongo_abelii
ENSGACG00000009864	gfm1	94	78.236	ENSPCAG00000008934	GFM1	100	78.236	Procavia_capensis
ENSGACG00000009864	gfm1	97	79.310	ENSPCOG00000022259	GFM1	99	77.689	Propithecus_coquereli
ENSGACG00000009864	gfm1	97	78.621	ENSPVAG00000013605	GFM1	99	76.790	Pteropus_vampyrus
ENSGACG00000009864	gfm1	100	89.453	ENSPNYG00000006037	gfm1	100	89.453	Pundamilia_nyererei
ENSGACG00000009864	gfm1	99	84.358	ENSPNAG00000001237	gfm1	99	84.358	Pygocentrus_nattereri
ENSGACG00000009864	gfm1	99	77.660	ENSRNOG00000012873	Gfm1	99	77.660	Rattus_norvegicus
ENSGACG00000009864	gfm1	97	79.172	ENSRBIG00000031363	GFM1	99	77.321	Rhinopithecus_bieti
ENSGACG00000009864	gfm1	97	79.310	ENSRROG00000031081	GFM1	99	77.454	Rhinopithecus_roxellana
ENSGACG00000009864	gfm1	96	54.972	YLR069C	-	94	54.972	Saccharomyces_cerevisiae
ENSGACG00000009864	gfm1	99	77.188	ENSSBOG00000023252	GFM1	99	77.188	Saimiri_boliviensis_boliviensis
ENSGACG00000009864	gfm1	98	79.484	ENSSHAG00000017772	GFM1	98	79.484	Sarcophilus_harrisii
ENSGACG00000009864	gfm1	99	83.712	ENSSFOG00015003117	gfm1	99	84.094	Scleropages_formosus
ENSGACG00000009864	gfm1	100	89.453	ENSSMAG00000013221	gfm1	100	89.453	Scophthalmus_maximus
ENSGACG00000009864	gfm1	100	90.521	ENSSDUG00000018665	gfm1	100	90.521	Seriola_dumerili
ENSGACG00000009864	gfm1	100	90.387	ENSSLDG00000020606	gfm1	100	90.387	Seriola_lalandi_dorsalis
ENSGACG00000009864	gfm1	99	77.868	ENSSPUG00000018686	GFM1	100	77.868	Sphenodon_punctatus
ENSGACG00000009864	gfm1	100	91.055	ENSSPAG00000008800	gfm1	100	91.055	Stegastes_partitus
ENSGACG00000009864	gfm1	97	78.483	ENSSSCG00000025651	GFM1	99	76.689	Sus_scrofa
ENSGACG00000009864	gfm1	100	87.717	ENSTRUG00000009244	gfm1	100	87.717	Takifugu_rubripes
ENSGACG00000009864	gfm1	100	89.586	ENSTNIG00000007729	gfm1	100	89.586	Tetraodon_nigroviridis
ENSGACG00000009864	gfm1	90	71.662	ENSTBEG00000017404	GFM1	89	71.662	Tupaia_belangeri
ENSGACG00000009864	gfm1	97	78.759	ENSTTRG00000001735	GFM1	96	78.759	Tursiops_truncatus
ENSGACG00000009864	gfm1	97	79.586	ENSUAMG00000026381	GFM1	99	77.984	Ursus_americanus
ENSGACG00000009864	gfm1	97	79.586	ENSUMAG00000011268	GFM1	99	77.984	Ursus_maritimus
ENSGACG00000009864	gfm1	97	76.138	ENSVPAG00000009444	GFM1	99	74.536	Vicugna_pacos
ENSGACG00000009864	gfm1	96	80.195	ENSVVUG00000020091	GFM1	99	80.000	Vulpes_vulpes
ENSGACG00000009864	gfm1	100	79.681	ENSXETG00000032551	GFM1	100	79.681	Xenopus_tropicalis
ENSGACG00000009864	gfm1	54	86.634	ENSXCOG00000012590	gfm1	93	86.634	Xiphophorus_couchianus
ENSGACG00000009864	gfm1	99	90.374	ENSXMAG00000000261	gfm1	99	90.374	Xiphophorus_maculatus