EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000009973 (Gene tree)
Gene ID: -
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 1902 bases
Position: chrgroupXVII:10012942-10014843
Accession: ZDB-GENE-040426-779
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000013170	FDF	PF09532.10	9.8e-11	1	1
ENSGACP00000013170	SM-ATX	PF14438.6	7.2e-09	1	1
ENSGACP00000013170	LSM14	PF12701.7	4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000013195	-	1110	-	ENSGACP00000013170	369 (aa)	-	G3P6E7

Gene Model

Click here to download ENSGACG00000009973's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000009973's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000009973	lsm14b	90	40.049	ENSGACG00000007738	lsm14aa	86	41.007
ENSGACG00000009973	lsm14b	90	41.089	ENSGACG00000014572	LSM14A	87	42.927
ENSGACG00000009973	lsm14b	91	47.312	ENSGACG00000015099	LSM14B	92	49.185

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000009973	lsm14b	92	55.899	ENSG00000149657	LSM14B	99	52.174	Homo_sapiens
ENSGACG00000009973	lsm14b	99	78.552	ENSAPOG00000001780	lsm14b	99	78.284	Acanthochromis_polyacanthus
ENSGACG00000009973	lsm14b	92	47.901	ENSAMEG00000013430	LSM14B	92	47.901	Ailuropoda_melanoleuca
ENSGACG00000009973	lsm14b	62	39.516	ENSACIG00000003147	LSM14B	88	43.154	Amphilophus_citrinellus
ENSGACG00000009973	lsm14b	99	70.190	ENSACIG00000012266	lsm14b	99	71.003	Amphilophus_citrinellus
ENSGACG00000009973	lsm14b	98	47.287	ENSAOCG00000006667	LSM14B	90	45.799	Amphiprion_ocellaris
ENSGACG00000009973	lsm14b	99	79.625	ENSAOCG00000012380	lsm14b	99	79.625	Amphiprion_ocellaris
ENSGACG00000009973	lsm14b	99	72.752	ENSAPEG00000023633	lsm14b	99	69.086	Amphiprion_percula
ENSGACG00000009973	lsm14b	66	43.262	ENSATEG00000015895	LSM14B	89	42.708	Anabas_testudineus
ENSGACG00000009973	lsm14b	99	74.394	ENSATEG00000016603	lsm14b	99	75.339	Anabas_testudineus
ENSGACG00000009973	lsm14b	82	46.556	ENSAPLG00000013203	LSM14B	90	46.556	Anas_platyrhynchos
ENSGACG00000009973	lsm14b	92	52.661	ENSACAG00000016195	LSM14B	91	52.941	Anolis_carolinensis
ENSGACG00000009973	lsm14b	92	54.237	ENSANAG00000037915	LSM14B	91	54.270	Aotus_nancymaae
ENSGACG00000009973	lsm14b	99	72.267	ENSACLG00000019663	lsm14b	99	72.267	Astatotilapia_calliptera
ENSGACG00000009973	lsm14b	91	58.333	ENSAMXG00000002865	lsm14b	91	59.890	Astyanax_mexicanus
ENSGACG00000009973	lsm14b	92	50.000	ENSBTAG00000021558	LSM14B	92	50.000	Bos_taurus
ENSGACG00000009973	lsm14b	92	54.821	ENSCJAG00000014434	LSM14B	91	54.821	Callithrix_jacchus
ENSGACG00000009973	lsm14b	82	45.777	ENSCAFG00000012518	LSM14B	90	45.777	Canis_familiaris
ENSGACG00000009973	lsm14b	92	54.670	ENSCAFG00020022150	LSM14B	91	54.670	Canis_lupus_dingo
ENSGACG00000009973	lsm14b	92	54.945	ENSCHIG00000010284	-	91	54.945	Capra_hircus
ENSGACG00000009973	lsm14b	97	42.133	ENSCHIG00000022681	-	91	42.776	Capra_hircus
ENSGACG00000009973	lsm14b	81	50.156	ENSTSYG00000031914	LSM14B	81	50.156	Carlito_syrichta
ENSGACG00000009973	lsm14b	81	51.899	ENSCAPG00000013059	LSM14B	91	51.899	Cavia_aperea
ENSGACG00000009973	lsm14b	81	52.063	ENSCPOG00000038080	LSM14B	91	52.063	Cavia_porcellus
ENSGACG00000009973	lsm14b	92	54.520	ENSCCAG00000021267	LSM14B	91	54.545	Cebus_capucinus
ENSGACG00000009973	lsm14b	92	39.779	ENSCCAG00000024900	-	76	37.922	Cebus_capucinus
ENSGACG00000009973	lsm14b	92	55.367	ENSCATG00000036006	LSM14B	91	55.367	Cercocebus_atys
ENSGACG00000009973	lsm14b	81	50.794	ENSCLAG00000003186	LSM14B	91	50.794	Chinchilla_lanigera
ENSGACG00000009973	lsm14b	92	49.618	ENSCSAG00000015729	LSM14B	92	49.618	Chlorocebus_sabaeus
ENSGACG00000009973	lsm14b	62	34.000	ENSCHOG00000006997	-	88	33.200	Choloepus_hoffmanni
ENSGACG00000009973	lsm14b	92	48.866	ENSCPBG00000027065	LSM14B	92	48.866	Chrysemys_picta_bellii
ENSGACG00000009973	lsm14b	81	50.794	ENSCANG00000036986	LSM14B	91	50.794	Colobus_angolensis_palliatus
ENSGACG00000009973	lsm14b	92	54.494	ENSCGRG00001018399	Lsm14b	91	54.494	Cricetulus_griseus_chok1gshd
ENSGACG00000009973	lsm14b	61	39.427	ENSCGRG00000006111	-	92	39.427	Cricetulus_griseus_crigri
ENSGACG00000009973	lsm14b	54	42.791	ENSCGRG00000002484	-	84	42.791	Cricetulus_griseus_crigri
ENSGACG00000009973	lsm14b	99	47.668	ENSCSEG00000020669	LSM14B	92	48.333	Cynoglossus_semilaevis
ENSGACG00000009973	lsm14b	90	73.021	ENSCSEG00000004722	lsm14b	99	72.267	Cynoglossus_semilaevis
ENSGACG00000009973	lsm14b	64	38.115	ENSCVAG00000012433	-	88	35.622	Cyprinodon_variegatus
ENSGACG00000009973	lsm14b	92	55.000	ENSDARG00000025386	lsm14b	92	56.780	Danio_rerio
ENSGACG00000009973	lsm14b	61	41.754	ENSDNOG00000025246	LSM14B	90	41.754	Dasypus_novemcinctus
ENSGACG00000009973	lsm14b	82	50.000	ENSDORG00000016683	Lsm14b	79	50.000	Dipodomys_ordii
ENSGACG00000009973	lsm14b	57	41.518	ENSETEG00000011188	-	99	41.102	Echinops_telfairi
ENSGACG00000009973	lsm14b	93	44.290	ENSETEG00000001869	-	91	43.343	Echinops_telfairi
ENSGACG00000009973	lsm14b	61	45.992	ENSEASG00005023218	LSM14B	87	43.460	Equus_asinus_asinus
ENSGACG00000009973	lsm14b	92	55.899	ENSECAG00000010659	LSM14B	91	54.945	Equus_caballus
ENSGACG00000009973	lsm14b	57	66.000	ENSEEUG00000007331	LSM14B	79	66.000	Erinaceus_europaeus
ENSGACG00000009973	lsm14b	99	61.538	ENSELUG00000005780	lsm14b	99	59.947	Esox_lucius
ENSGACG00000009973	lsm14b	90	51.714	ENSELUG00000016299	LSM14B	99	51.169	Esox_lucius
ENSGACG00000009973	lsm14b	92	54.802	ENSFCAG00000003248	LSM14B	91	54.802	Felis_catus
ENSGACG00000009973	lsm14b	82	45.580	ENSFALG00000010618	LSM14B	92	45.580	Ficedula_albicollis
ENSGACG00000009973	lsm14b	81	50.476	ENSFDAG00000002214	LSM14B	91	50.476	Fukomys_damarensis
ENSGACG00000009973	lsm14b	70	47.670	ENSFHEG00000003362	LSM14B	72	48.443	Fundulus_heteroclitus
ENSGACG00000009973	lsm14b	99	68.280	ENSFHEG00000006237	lsm14b	99	68.280	Fundulus_heteroclitus
ENSGACG00000009973	lsm14b	100	69.519	ENSGMOG00000017115	lsm14b	100	66.310	Gadus_morhua
ENSGACG00000009973	lsm14b	92	51.515	ENSGALG00000005125	LSM14B	91	53.203	Gallus_gallus
ENSGACG00000009973	lsm14b	99	64.973	ENSGAFG00000020318	lsm14b	99	64.973	Gambusia_affinis
ENSGACG00000009973	lsm14b	66	39.516	ENSGAFG00000013723	LSM14B	87	39.035	Gambusia_affinis
ENSGACG00000009973	lsm14b	59	41.202	ENSGAGG00000004106	LSM14B	86	42.060	Gopherus_agassizii
ENSGACG00000009973	lsm14b	83	51.703	ENSGGOG00000005630	LSM14B	86	51.703	Gorilla_gorilla
ENSGACG00000009973	lsm14b	92	54.237	ENSHGLG00000015055	LSM14B	91	54.237	Heterocephalus_glaber_female
ENSGACG00000009973	lsm14b	81	49.840	ENSHGLG00100015273	LSM14B	90	49.840	Heterocephalus_glaber_male
ENSGACG00000009973	lsm14b	95	49.046	ENSHCOG00000018747	LSM14B	92	44.959	Hippocampus_comes
ENSGACG00000009973	lsm14b	69	56.031	ENSHCOG00000004867	lsm14b	100	52.874	Hippocampus_comes
ENSGACG00000009973	lsm14b	91	61.127	ENSIPUG00000014946	lsm14b	87	61.560	Ictalurus_punctatus
ENSGACG00000009973	lsm14b	81	51.111	ENSSTOG00000020482	LSM14B	91	51.111	Ictidomys_tridecemlineatus
ENSGACG00000009973	lsm14b	91	53.541	ENSJJAG00000012728	Lsm14b	90	53.541	Jaculus_jaculus
ENSGACG00000009973	lsm14b	99	71.809	ENSKMAG00000017524	lsm14b	99	71.809	Kryptolebias_marmoratus
ENSGACG00000009973	lsm14b	51	40.099	ENSKMAG00000012834	-	88	42.365	Kryptolebias_marmoratus
ENSGACG00000009973	lsm14b	90	48.843	ENSLACG00000003849	LSM14B	92	48.000	Latimeria_chalumnae
ENSGACG00000009973	lsm14b	91	57.143	ENSLOCG00000003746	lsm14b	91	57.627	Lepisosteus_oculatus
ENSGACG00000009973	lsm14b	82	50.779	ENSLAFG00000007492	LSM14B	91	51.713	Loxodonta_africana
ENSGACG00000009973	lsm14b	92	55.085	ENSMFAG00000041479	LSM14B	91	55.085	Macaca_fascicularis
ENSGACG00000009973	lsm14b	92	55.085	ENSMMUG00000014084	LSM14B	91	55.085	Macaca_mulatta
ENSGACG00000009973	lsm14b	92	55.085	ENSMNEG00000045573	LSM14B	91	55.085	Macaca_nemestrina
ENSGACG00000009973	lsm14b	81	51.746	ENSMLEG00000040895	LSM14B	91	51.746	Mandrillus_leucophaeus
ENSGACG00000009973	lsm14b	97	51.475	ENSMAMG00000024124	LSM14B	91	51.282	Mastacembelus_armatus
ENSGACG00000009973	lsm14b	99	72.654	ENSMAMG00000020539	lsm14b	99	72.386	Mastacembelus_armatus
ENSGACG00000009973	lsm14b	99	72.386	ENSMZEG00005000987	lsm14b	99	71.850	Maylandia_zebra
ENSGACG00000009973	lsm14b	93	48.611	ENSMZEG00005026001	LSM14B	95	49.584	Maylandia_zebra
ENSGACG00000009973	lsm14b	83	47.879	ENSMGAG00000005300	LSM14B	90	49.849	Meleagris_gallopavo
ENSGACG00000009973	lsm14b	92	54.213	ENSMAUG00000020700	Lsm14b	91	54.213	Mesocricetus_auratus
ENSGACG00000009973	lsm14b	92	55.367	ENSMICG00000014675	LSM14B	91	55.367	Microcebus_murinus
ENSGACG00000009973	lsm14b	92	54.494	ENSMOCG00000020600	Lsm14b	91	54.213	Microtus_ochrogaster
ENSGACG00000009973	lsm14b	62	37.638	ENSMOCG00000005119	-	93	37.778	Microtus_ochrogaster
ENSGACG00000009973	lsm14b	90	68.627	ENSMMOG00000020042	lsm14b	94	68.785	Mola_mola
ENSGACG00000009973	lsm14b	91	51.613	ENSMMOG00000017321	LSM14B	90	49.711	Mola_mola
ENSGACG00000009973	lsm14b	61	39.785	ENSMODG00000016690	LSM14B	89	40.210	Monodelphis_domestica
ENSGACG00000009973	lsm14b	99	71.925	ENSMALG00000004783	lsm14b	96	71.925	Monopterus_albus
ENSGACG00000009973	lsm14b	92	48.189	ENSMALG00000022251	LSM14B	91	49.438	Monopterus_albus
ENSGACG00000009973	lsm14b	92	54.213	MGP_CAROLIEiJ_G0024770	Lsm14b	91	54.213	Mus_caroli
ENSGACG00000009973	lsm14b	92	54.213	ENSMUSG00000039108	Lsm14b	91	53.591	Mus_musculus
ENSGACG00000009973	lsm14b	92	54.775	MGP_PahariEiJ_G0026214	Lsm14b	91	54.775	Mus_pahari
ENSGACG00000009973	lsm14b	92	54.213	MGP_SPRETEiJ_G0025693	Lsm14b	91	53.591	Mus_spretus
ENSGACG00000009973	lsm14b	87	44.504	ENSMPUG00000007584	LSM14B	92	44.118	Mustela_putorius_furo
ENSGACG00000009973	lsm14b	90	55.182	ENSMLUG00000000304	LSM14B	91	55.096	Myotis_lucifugus
ENSGACG00000009973	lsm14b	53	45.024	ENSNGAG00000016550	Lsm14b	86	44.976	Nannospalax_galili
ENSGACG00000009973	lsm14b	81	51.429	ENSNLEG00000015757	LSM14B	91	51.429	Nomascus_leucogenys
ENSGACG00000009973	lsm14b	66	72.662	ENSMEUG00000008267	-	66	72.662	Notamacropus_eugenii
ENSGACG00000009973	lsm14b	92	54.520	ENSODEG00000004099	LSM14B	91	54.520	Octodon_degus
ENSGACG00000009973	lsm14b	99	73.529	ENSONIG00000020318	lsm14b	99	73.138	Oreochromis_niloticus
ENSGACG00000009973	lsm14b	72	54.982	ENSOANG00000003370	LSM14B	94	55.351	Ornithorhynchus_anatinus
ENSGACG00000009973	lsm14b	82	50.157	ENSOCUG00000006279	LSM14B	91	50.157	Oryctolagus_cuniculus
ENSGACG00000009973	lsm14b	93	43.889	ENSORLG00000028353	LSM14B	91	44.000	Oryzias_latipes
ENSGACG00000009973	lsm14b	99	73.995	ENSORLG00000013525	lsm14b	99	74.263	Oryzias_latipes
ENSGACG00000009973	lsm14b	99	73.995	ENSORLG00020020553	lsm14b	99	74.263	Oryzias_latipes_hni
ENSGACG00000009973	lsm14b	62	33.858	ENSORLG00020018191	-	85	34.008	Oryzias_latipes_hni
ENSGACG00000009973	lsm14b	93	43.575	ENSORLG00015013157	LSM14B	91	44.000	Oryzias_latipes_hsok
ENSGACG00000009973	lsm14b	99	73.995	ENSORLG00015016862	lsm14b	99	74.263	Oryzias_latipes_hsok
ENSGACG00000009973	lsm14b	99	72.581	ENSOMEG00000023917	lsm14b	99	73.458	Oryzias_melastigma
ENSGACG00000009973	lsm14b	64	38.333	ENSOMEG00000000171	-	85	37.445	Oryzias_melastigma
ENSGACG00000009973	lsm14b	92	49.626	ENSOGAG00000003915	LSM14B	92	49.626	Otolemur_garnettii
ENSGACG00000009973	lsm14b	83	46.006	ENSOARG00000014706	LSM14B	90	46.301	Ovis_aries
ENSGACG00000009973	lsm14b	83	51.703	ENSPPAG00000035799	LSM14B	86	51.703	Pan_paniscus
ENSGACG00000009973	lsm14b	92	55.211	ENSPPRG00000009197	LSM14B	91	55.211	Panthera_pardus
ENSGACG00000009973	lsm14b	61	43.882	ENSPTIG00000021518	LSM14B	90	43.038	Panthera_tigris_altaica
ENSGACG00000009973	lsm14b	92	55.899	ENSPTRG00000013696	LSM14B	91	55.899	Pan_troglodytes
ENSGACG00000009973	lsm14b	92	55.085	ENSPANG00000011747	LSM14B	91	55.085	Papio_anubis
ENSGACG00000009973	lsm14b	92	61.850	ENSPKIG00000003275	lsm14b	96	71.560	Paramormyrops_kingsleyae
ENSGACG00000009973	lsm14b	82	51.242	ENSPSIG00000014762	LSM14B	91	51.242	Pelodiscus_sinensis
ENSGACG00000009973	lsm14b	92	54.494	ENSPEMG00000017688	Lsm14b	92	54.494	Peromyscus_maniculatus_bairdii
ENSGACG00000009973	lsm14b	92	54.775	ENSPCIG00000013405	LSM14B	91	54.775	Phascolarctos_cinereus
ENSGACG00000009973	lsm14b	99	70.161	ENSPFOG00000005631	lsm14b	99	70.161	Poecilia_formosa
ENSGACG00000009973	lsm14b	99	69.624	ENSPLAG00000002449	lsm14b	99	69.624	Poecilia_latipinna
ENSGACG00000009973	lsm14b	90	46.784	ENSPLAG00000005793	LSM14B	91	46.686	Poecilia_latipinna
ENSGACG00000009973	lsm14b	90	45.402	ENSPMEG00000022953	LSM14B	91	46.974	Poecilia_mexicana
ENSGACG00000009973	lsm14b	99	70.430	ENSPMEG00000000745	lsm14b	99	70.430	Poecilia_mexicana
ENSGACG00000009973	lsm14b	62	36.434	ENSPREG00000007828	LSM14B	87	37.959	Poecilia_reticulata
ENSGACG00000009973	lsm14b	92	49.322	ENSPPYG00000011194	LSM14B	91	49.730	Pongo_abelii
ENSGACG00000009973	lsm14b	92	55.085	ENSPCOG00000013625	LSM14B	91	55.085	Propithecus_coquereli
ENSGACG00000009973	lsm14b	91	61.337	ENSPNAG00000012777	lsm14b	91	61.050	Pygocentrus_nattereri
ENSGACG00000009973	lsm14b	92	48.861	ENSRNOG00000054557	Lsm14b	92	48.861	Rattus_norvegicus
ENSGACG00000009973	lsm14b	81	50.633	ENSRBIG00000033461	LSM14B	90	50.633	Rhinopithecus_bieti
ENSGACG00000009973	lsm14b	83	51.863	ENSRROG00000042949	LSM14B	82	51.863	Rhinopithecus_roxellana
ENSGACG00000009973	lsm14b	81	51.582	ENSSBOG00000032820	LSM14B	91	51.582	Saimiri_boliviensis_boliviensis
ENSGACG00000009973	lsm14b	82	50.453	ENSSHAG00000015528	LSM14B	89	50.149	Sarcophilus_harrisii
ENSGACG00000009973	lsm14b	90	59.882	ENSSFOG00015004627	lsm14b	91	60.114	Scleropages_formosus
ENSGACG00000009973	lsm14b	99	50.127	ENSSMAG00000000135	LSM14B	91	51.524	Scophthalmus_maximus
ENSGACG00000009973	lsm14b	99	78.571	ENSSMAG00000012725	lsm14b	99	78.571	Scophthalmus_maximus
ENSGACG00000009973	lsm14b	92	50.704	ENSSDUG00000022770	LSM14B	91	47.967	Seriola_dumerili
ENSGACG00000009973	lsm14b	99	79.787	ENSSDUG00000020977	lsm14b	99	79.787	Seriola_dumerili
ENSGACG00000009973	lsm14b	61	43.320	ENSSLDG00000011354	-	89	45.211	Seriola_lalandi_dorsalis
ENSGACG00000009973	lsm14b	53	43.541	ENSSARG00000007749	-	99	43.541	Sorex_araneus
ENSGACG00000009973	lsm14b	92	49.752	ENSSPUG00000014360	LSM14B	96	52.273	Sphenodon_punctatus
ENSGACG00000009973	lsm14b	99	74.526	ENSSPAG00000020915	lsm14b	99	74.797	Stegastes_partitus
ENSGACG00000009973	lsm14b	66	38.971	ENSSPAG00000018854	-	88	37.549	Stegastes_partitus
ENSGACG00000009973	lsm14b	92	54.270	ENSSSCG00000026052	LSM14B	90	39.860	Sus_scrofa
ENSGACG00000009973	lsm14b	82	51.084	ENSTGUG00000007884	LSM14B	91	51.084	Taeniopygia_guttata
ENSGACG00000009973	lsm14b	99	70.933	ENSTRUG00000011354	lsm14b	99	70.933	Takifugu_rubripes
ENSGACG00000009973	lsm14b	92	52.125	ENSTRUG00000001529	LSM14B	91	52.557	Takifugu_rubripes
ENSGACG00000009973	lsm14b	99	69.010	ENSTNIG00000002445	lsm14b	99	69.010	Tetraodon_nigroviridis
ENSGACG00000009973	lsm14b	90	47.911	ENSUAMG00000025298	LSM14B	90	47.911	Ursus_americanus
ENSGACG00000009973	lsm14b	90	47.911	ENSUMAG00000000480	LSM14B	90	47.911	Ursus_maritimus
ENSGACG00000009973	lsm14b	82	51.220	ENSVVUG00000015920	LSM14B	89	51.220	Vulpes_vulpes
ENSGACG00000009973	lsm14b	86	53.846	ENSXETG00000001997	lsm14b	99	53.846	Xenopus_tropicalis
ENSGACG00000009973	lsm14b	99	67.473	ENSXMAG00000010013	lsm14b	99	67.473	Xiphophorus_maculatus