EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000010096 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 1185 bases
Position: chrgroupI:10068110-10069294
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000013338	MMR_HSR1	PF01926.23	9.1e-05	1	1
ENSGACP00000013332	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000013357	-	549	-	ENSGACP00000013332	183 (aa)	-	G3P6V8
ENSGACT00000013363	-	519	-	ENSGACP00000013338	173 (aa)	-	G3P6W4

Gene Model

Click here to download ENSGACG00000010096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000010096's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000010096	-	66	32.231	ENSGACG00000011607	rab32b	55	32.231
ENSGACG00000010096	-	99	38.012	ENSGACG00000018033	arl3l2	89	38.012
ENSGACG00000010096	-	95	45.122	ENSGACG00000019812	arl2	87	45.122
ENSGACG00000010096	-	96	40.361	ENSGACG00000016756	-	89	40.361
ENSGACG00000010096	-	94	51.829	ENSGACG00000003831	-	89	51.829
ENSGACG00000010096	-	90	43.396	ENSGACG00000000497	-	86	41.860
ENSGACG00000010096	-	74	30.534	ENSGACG00000011972	arl8bb	77	30.534
ENSGACG00000010096	-	94	52.147	ENSGACG00000004343	arf2b	88	52.147
ENSGACG00000010096	-	90	46.835	ENSGACG00000008143	arl4cb	86	44.848
ENSGACG00000010096	-	96	42.771	ENSGACG00000019098	arl1	93	41.714
ENSGACG00000010096	-	95	50.303	ENSGACG00000012500	-	89	50.303
ENSGACG00000010096	-	94	38.037	ENSGACG00000004052	arl8	89	38.037
ENSGACG00000010096	-	94	32.759	ENSGACG00000001474	sar1b	86	32.759
ENSGACG00000010096	-	79	30.345	ENSGACG00000012267	arl8ba	76	30.345
ENSGACG00000010096	-	94	49.693	ENSGACG00000000686	arf5	88	49.693
ENSGACG00000010096	-	94	53.374	ENSGACG00000017437	-	91	51.807
ENSGACG00000010096	-	94	38.323	ENSGACG00000006779	-	88	38.323
ENSGACG00000010096	-	94	51.534	ENSGACG00000009120	-	88	51.534
ENSGACG00000010096	-	94	37.195	ENSGACG00000009321	arl5c	88	38.182
ENSGACG00000010096	-	95	50.289	ENSGACG00000015399	arl11	99	50.289
ENSGACG00000010096	-	90	43.671	ENSGACG00000012810	arl4aa	81	43.478
ENSGACG00000010096	-	90	42.405	ENSGACG00000003710	arl4d	84	40.606
ENSGACG00000010096	-	94	52.761	ENSGACG00000000746	arf3b	88	52.761
ENSGACG00000010096	-	88	45.161	ENSGACG00000000500	-	83	45.342
ENSGACG00000010096	-	96	41.566	ENSGACG00000003070	arl3	85	41.566
ENSGACG00000010096	-	98	56.471	ENSGACG00000013840	arl14	98	55.000
ENSGACG00000010096	-	94	50.307	ENSGACG00000014195	-	88	49.091
ENSGACG00000010096	-	94	35.057	ENSGACG00000002365	-	86	35.057
ENSGACG00000010096	-	94	33.333	ENSGACG00000008616	sar1ab	90	33.333
ENSGACG00000010096	-	94	35.928	ENSGACG00000015382	ARL6	88	35.928
ENSGACG00000010096	-	95	37.195	ENSGACG00000001204	arl5a	87	37.423
ENSGACG00000010096	-	99	38.122	ENSGACG00000011497	arfrp1	88	38.122

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000010096	-	97	53.005	ENSACIG00000013244	arl14	89	53.005	Amphilophus_citrinellus
ENSGACG00000010096	-	97	52.222	ENSACLG00000026984	arl14	89	52.222	Astatotilapia_calliptera
ENSGACG00000010096	-	100	82.514	ENSACLG00000015415	-	88	82.514	Astatotilapia_calliptera
ENSGACG00000010096	-	100	78.689	ENSCSEG00000017926	-	89	78.689	Cynoglossus_semilaevis
ENSGACG00000010096	-	97	57.222	ENSDARG00000063223	arl14	90	57.222	Danio_rerio
ENSGACG00000010096	-	99	65.934	ENSELUG00000024060	-	64	65.934	Esox_lucius
ENSGACG00000010096	-	97	53.073	ENSFHEG00000018721	arl14	89	53.073	Fundulus_heteroclitus
ENSGACG00000010096	-	91	54.717	ENSGMOG00000020214	arl14	100	53.254	Gadus_morhua
ENSGACG00000010096	-	100	79.781	ENSGAFG00000012819	-	93	79.781	Gambusia_affinis
ENSGACG00000010096	-	97	52.222	ENSHBUG00000001159	arl14	89	52.222	Haplochromis_burtoni
ENSGACG00000010096	-	99	52.717	ENSHCOG00000009562	arl14	86	52.717	Hippocampus_comes
ENSGACG00000010096	-	100	74.317	ENSKMAG00000020389	-	88	74.317	Kryptolebias_marmoratus
ENSGACG00000010096	-	97	53.889	ENSKMAG00000010409	arl14	90	53.889	Kryptolebias_marmoratus
ENSGACG00000010096	-	96	54.237	ENSLBEG00000021116	arl14	83	54.237	Labrus_bergylta
ENSGACG00000010096	-	100	81.967	ENSMAMG00000012474	-	88	81.967	Mastacembelus_armatus
ENSGACG00000010096	-	97	52.514	ENSMAMG00000011773	arl14	89	52.514	Mastacembelus_armatus
ENSGACG00000010096	-	97	52.222	ENSMZEG00005025506	arl14	89	52.222	Maylandia_zebra
ENSGACG00000010096	-	100	82.514	ENSMZEG00005000218	-	88	82.514	Maylandia_zebra
ENSGACG00000010096	-	96	51.977	ENSONIG00000009954	arl14	85	51.977	Oreochromis_niloticus
ENSGACG00000010096	-	100	83.607	ENSONIG00000003641	-	78	83.607	Oreochromis_niloticus
ENSGACG00000010096	-	95	48.864	ENSORLG00000027330	arl14	95	48.864	Oryzias_latipes
ENSGACG00000010096	-	95	48.864	ENSORLG00020014120	arl14	95	48.864	Oryzias_latipes_hni
ENSGACG00000010096	-	95	48.864	ENSORLG00015014176	arl14	95	48.864	Oryzias_latipes_hsok
ENSGACG00000010096	-	92	51.829	ENSOMEG00000016904	arl14	90	51.829	Oryzias_melastigma
ENSGACG00000010096	-	100	78.689	ENSPFOG00000012216	-	86	78.689	Poecilia_formosa
ENSGACG00000010096	-	97	52.514	ENSPFOG00000020069	arl14	89	52.514	Poecilia_formosa
ENSGACG00000010096	-	92	54.658	ENSPLAG00000017362	arl14	96	53.846	Poecilia_latipinna
ENSGACG00000010096	-	100	78.142	ENSPMEG00000008427	-	88	78.142	Poecilia_mexicana
ENSGACG00000010096	-	97	53.631	ENSPREG00000001976	arl14	88	53.631	Poecilia_reticulata
ENSGACG00000010096	-	100	80.328	ENSPREG00000001895	-	88	80.328	Poecilia_reticulata
ENSGACG00000010096	-	100	82.514	ENSPNYG00000006844	-	95	82.514	Pundamilia_nyererei
ENSGACG00000010096	-	100	83.060	ENSSMAG00000012843	-	88	83.060	Scophthalmus_maximus
ENSGACG00000010096	-	60	83.654	ENSSDUG00000023723	-	100	81.250	Seriola_dumerili
ENSGACG00000010096	-	100	83.607	ENSSLDG00000006512	-	88	83.607	Seriola_lalandi_dorsalis
ENSGACG00000010096	-	97	54.190	ENSSPAG00000014539	arl14	87	54.190	Stegastes_partitus
ENSGACG00000010096	-	100	86.339	ENSSPAG00000014422	-	88	86.339	Stegastes_partitus
ENSGACG00000010096	-	97	53.631	ENSTNIG00000015242	-	92	53.631	Tetraodon_nigroviridis
ENSGACG00000010096	-	100	80.328	ENSXMAG00000021386	-	88	80.328	Xiphophorus_maculatus